RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 CRHR1P34998 444 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 ZNF460Q14592 562 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 RTP5Q14D33 572 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 RPE65Q16518 533 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 CDKL4Q5MAI5 379 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 AGBL2Q5U5Z8 902 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 ADAMTSL2Q86TH1 951 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 TBC1D21Q8IYX1 336 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 NAGSQ8N159 534 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 ZNF843Q8N446 348 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 ARL10Q8N8L6 244 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 OR6C4Q8NGE1 309 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 OR5K2Q8NHB8 316 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 MAGEC3Q8TD91 643 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 ANKRD49Q8WVL7 239 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 KIAA1191Q96A73 305 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 TLCD1Q96CP7 247 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 NXPE2Q96DL1 559 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 LINGO1Q96FE5 620 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 INSM2Q96T92 566 aaPredicted RBP11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 SLC12A9Q9BXP2 914 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 WWP1Q9H0M0 922 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 TFB2MQ9H5Q4 396 aaKnown RBP11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 RDH14Q9HBH5 336 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 IGSF5Q9NSI5 407 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 SCHIP1Q9P0W5 487 aaPredicted RBP11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 DCDC2Q9UHG0 476 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 COLEC10Q9Y6Z7 277 aa11.34□□□□□ -0.59
CHMP2A-207ENST00000600804 COL12A1Q99715 3063 aa11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 A0A1W2PPM1 405 aa11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 SNX2O60749 519 aa11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 LDOC1O95751 146 aaPredicted RBP11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 PYGBP11216 843 aa11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 JUPP14923 745 aa11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 KRT4P19013 534 aa11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 SLC19A1P41440 591 aa11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 CCT5P48643 541 aa11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 KPNA2P52292 529 aaKnown RBP11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 AP1S2P56377 157 aa11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 C19orf57Q0VDD7 668 aa11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 DLG1Q12959 904 aa11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 ACAP2Q15057 778 aa11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 DEFB133Q30KQ1 61 aa11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 SBSNQ6UWP8 590 aa11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 NAPRTQ6XQN6 538 aa11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 PIWIL4Q7Z3Z4 852 aaKnown RBP11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 ZNF438Q7Z4V0 828 aa11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 ISCA2Q86U28 154 aa11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 SLC9B2Q86UD5 537 aa11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 DCUN1D3Q8IWE4 304 aa11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 BANPQ8N9N5 519 aa11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 PHC3Q8NDX5 983 aa11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 SPDYE1Q8NFV5 336 aaPredicted RBP11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 SNIP1Q8TAD8 396 aaKnown RBP11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 C12orf66Q96MD2 445 aa11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 TRIT1Q9H3H1 467 aaKnown RBP11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 KIR3DX1Q9H7L2 352 aa11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 ZNF624Q9P2J8 865 aaPredicted RBP11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 CPNE7Q9UBL6 633 aa11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 FAM8A1Q9UBU6 413 aa11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 POLG2Q9UHN1 485 aa11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 UBR5O95071 2799 aaPredicted RBP11.33□□□□□ -0.6
CHMP2A-207ENST00000600804 FLNCQ14315 2725 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 TK2O00142 265 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 MYO1CO00159 1063 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 TRIM38O00635 465 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 ZBTB14O43829 449 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 KDM1AO60341 852 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 BRINP1O60477 761 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 KERAO60938 352 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 GLRA3O75311 464 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 C1orf105O95561 183 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 CATP04040 527 aaKnown RBP11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 RBP1P09455 135 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 ERGP11308 486 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 PNLIPP16233 465 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 CYP2A7P20853 494 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 RPIAP49247 311 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 PGGT1BP53609 377 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 SLC18A1P54219 525 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 CDKL1Q00532 357 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 CSHL1Q14406 222 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 NR1D2Q14995 579 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 PPP1R3AQ16821 1122 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 C14orf28Q4W4Y0 310 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 KLC3Q6P597 504 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 EXOC3L1Q86VI1 746 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 PLD6Q8N2A8 252 aaKnown RBP11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 ARL14Q8N4G2 192 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 STAG3L4Q8TBR4 150 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 MAPK15Q8TD08 544 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 SLC37A2Q8TED4 501 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 KCTD4Q8WVF5 259 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 RAD51AP1Q96B01 352 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 SH3KBP1Q96B97 665 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 NXNL1Q96CM4 212 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 TSNARE1Q96NA8 513 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 SMC6Q96SB8 1091 aa11.32□□□□□ -0.6
CHMP2A-207ENST00000600804 MRPL57Q9BQC6 102 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms