RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 D2HGDHQ8N465 521 aa15.68■□□□□ 0.1
LSM4-206ENST00000600289 ZBTB2Q8N680 514 aa15.68■□□□□ 0.1
LSM4-206ENST00000600289 PWWP2AQ96N64 755 aa15.68■□□□□ 0.1
LSM4-206ENST00000600289 MAP3K3Q99759 626 aa15.68■□□□□ 0.1
LSM4-206ENST00000600289 MENTQ9BUN1 341 aa15.68■□□□□ 0.1
LSM4-206ENST00000600289 RAB17Q9H0T7 212 aa15.68■□□□□ 0.1
LSM4-206ENST00000600289 FBXO6Q9NRD1 293 aaPredicted RBP15.68■□□□□ 0.1
LSM4-206ENST00000600289 GRHL1Q9NZI5 618 aa15.68■□□□□ 0.1
LSM4-206ENST00000600289 ZC3H7BQ9UGR2 993 aaKnown RBP15.68■□□□□ 0.1
LSM4-206ENST00000600289 IL17BQ9UHF5 180 aa15.68■□□□□ 0.1
LSM4-206ENST00000600289 CHMP2BQ9UQN3 213 aa15.68■□□□□ 0.1
LSM4-206ENST00000600289 TMEM184BQ9Y519 407 aaPredicted RBP15.68■□□□□ 0.1
LSM4-206ENST00000600289 ANKRD17O75179 2603 aaKnown RBP15.68■□□□□ 0.1
LSM4-206ENST00000600289 C2orf74A8MZ97 194 aa15.67■□□□□ 0.1
LSM4-206ENST00000600289 E5RI56 91 aa15.67■□□□□ 0.1
LSM4-206ENST00000600289 AGRPO00253 132 aa15.67■□□□□ 0.1
LSM4-206ENST00000600289 POLR1CO15160 346 aaPredicted RBP15.67■□□□□ 0.1
LSM4-206ENST00000600289 EIF3HO15372 352 aaKnown RBP eCLIP15.67■□□□□ 0.1
LSM4-206ENST00000600289 KLK10O43240 276 aa15.67■□□□□ 0.1
LSM4-206ENST00000600289 MATN4O95460 622 aa15.67■□□□□ 0.1
LSM4-206ENST00000600289 FGF5P12034 268 aa15.67■□□□□ 0.1
LSM4-206ENST00000600289 POLR2CP19387 275 aaPredicted RBP15.67■□□□□ 0.1
LSM4-206ENST00000600289 CHRM3P20309 590 aa15.67■□□□□ 0.1
LSM4-206ENST00000600289 PKLRP30613 574 aa15.67■□□□□ 0.1
LSM4-206ENST00000600289 CCNFP41002 786 aa15.67■□□□□ 0.1
LSM4-206ENST00000600289 SEPHS1P49903 392 aa15.67■□□□□ 0.1
LSM4-206ENST00000600289 RAB28P51157 221 aa15.67■□□□□ 0.1
LSM4-206ENST00000600289 MPP1Q00013 466 aa15.67■□□□□ 0.1
LSM4-206ENST00000600289 CAV1Q03135 178 aa15.67■□□□□ 0.1
LSM4-206ENST00000600289 TUBB2AQ13885 445 aa15.67■□□□□ 0.1
LSM4-206ENST00000600289 MAP7Q14244 749 aa15.67■□□□□ 0.1
LSM4-206ENST00000600289 BPHLQ86WA6 291 aaPredicted RBP15.67■□□□□ 0.1
LSM4-206ENST00000600289 GSDMBQ8TAX9 411 aa15.67■□□□□ 0.1
LSM4-206ENST00000600289 SNRNP27Q8WVK2 155 aaKnown RBP15.67■□□□□ 0.1
LSM4-206ENST00000600289 FCRL4Q96PJ5 515 aa15.67■□□□□ 0.1
LSM4-206ENST00000600289 AARSD1Q9BTE6 412 aaKnown RBP15.67■□□□□ 0.1
LSM4-206ENST00000600289 TUBB2BQ9BVA1 445 aa15.67■□□□□ 0.1
LSM4-206ENST00000600289 RAB11FIP5Q9BXF6 653 aa15.67■□□□□ 0.1
LSM4-206ENST00000600289 TRIM4Q9C037 500 aa15.67■□□□□ 0.1
LSM4-206ENST00000600289 CCDC68Q9H2F9 335 aa15.67■□□□□ 0.1
LSM4-206ENST00000600289 CPNE5Q9HCH3 593 aa15.67■□□□□ 0.1
LSM4-206ENST00000600289 IARS2Q9NSE4 1012 aaKnown RBP15.67■□□□□ 0.1
LSM4-206ENST00000600289 CORO1CQ9ULV4 474 aaPredicted RBP15.67■□□□□ 0.1
LSM4-206ENST00000600289 UTP11Q9Y3A2 253 aaKnown RBP15.67■□□□□ 0.1
LSM4-206ENST00000600289 GSAPA4D1B5 854 aa15.66■□□□□ 0.1
LSM4-206ENST00000600289 EIF3FO00303 357 aaPredicted RBP15.66■□□□□ 0.1
LSM4-206ENST00000600289 URI1O94763 535 aaPredicted RBP15.66■□□□□ 0.1
LSM4-206ENST00000600289 HAUS5O94927 633 aa15.66■□□□□ 0.1
LSM4-206ENST00000600289 ERVK-10P10266 1014 aa15.66■□□□□ 0.1
LSM4-206ENST00000600289 CD9P21926 228 aa15.66■□□□□ 0.1
LSM4-206ENST00000600289 PRDX3P30048 256 aaKnown RBP15.66■□□□□ 0.1
LSM4-206ENST00000600289 TMPRSS3P57727 454 aa15.66■□□□□ 0.1
LSM4-206ENST00000600289 SH3BP2P78314 561 aa15.66■□□□□ 0.1
LSM4-206ENST00000600289 ACY1Q03154 408 aa15.66■□□□□ 0.1
LSM4-206ENST00000600289 ABRQ12979 859 aa15.66■□□□□ 0.1
LSM4-206ENST00000600289 PDIA2Q13087 525 aaKnown RBP15.66■□□□□ 0.1
LSM4-206ENST00000600289 TTLL9Q3SXZ7 439 aa15.66■□□□□ 0.1
LSM4-206ENST00000600289 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.66■□□□□ 0.1
LSM4-206ENST00000600289 ZFAND4Q86XD8 727 aa15.66■□□□□ 0.1
LSM4-206ENST00000600289 SIDT2Q8NBJ9 832 aaKnown RBP15.66■□□□□ 0.1
LSM4-206ENST00000600289 FLVCR1-AS1Q8TAF5 88 aa15.66■□□□□ 0.1
LSM4-206ENST00000600289 MED8Q96G25 268 aa15.66■□□□□ 0.1
LSM4-206ENST00000600289 NAF1Q96HR8 494 aaKnown RBP15.66■□□□□ 0.1
LSM4-206ENST00000600289 FOPNLQ96NB1 174 aa15.66■□□□□ 0.1
LSM4-206ENST00000600289 OR6C1Q96RD1 312 aa15.66■□□□□ 0.1
LSM4-206ENST00000600289 CHRNA10Q9GZZ6 450 aa15.66■□□□□ 0.1
LSM4-206ENST00000600289 DPH5Q9H2P9 285 aa15.66■□□□□ 0.1
LSM4-206ENST00000600289 SYTL2Q9HCH5 934 aa15.66■□□□□ 0.1
LSM4-206ENST00000600289 APMAPQ9HDC9 416 aa15.66■□□□□ 0.1
LSM4-206ENST00000600289 ACTR10Q9NZ32 417 aa15.66■□□□□ 0.1
LSM4-206ENST00000600289 GALPQ9UBC7 116 aa15.66■□□□□ 0.1
LSM4-206ENST00000600289 PILRAQ9UKJ1 303 aa15.66■□□□□ 0.1
LSM4-206ENST00000600289 TDRKHQ9Y2W6 561 aaKnown RBP15.66■□□□□ 0.1
LSM4-206ENST00000600289 DHRS7Q9Y394 339 aa15.66■□□□□ 0.1
LSM4-206ENST00000600289 PIPSLA2A3N6 862 aa15.65■□□□□ 0.1
LSM4-206ENST00000600289 RASGRF2O14827 1237 aa15.65■□□□□ 0.1
LSM4-206ENST00000600289 C1orf105O95561 183 aa15.65■□□□□ 0.1
LSM4-206ENST00000600289 DLGAP3O95886 979 aa15.65■□□□□ 0.1
LSM4-206ENST00000600289 CHRM5P08912 532 aaPredicted RBP15.65■□□□□ 0.1
LSM4-206ENST00000600289 CBSLP0DN79 551 aa15.65■□□□□ 0.1
LSM4-206ENST00000600289 ENO3P13929 434 aaPredicted RBP15.65■□□□□ 0.1
LSM4-206ENST00000600289 CBSP35520 551 aa15.65■□□□□ 0.1
LSM4-206ENST00000600289 MRPS25P82663 173 aaKnown RBP15.65■□□□□ 0.1
LSM4-206ENST00000600289 KIR2DS3Q14952 304 aa15.65■□□□□ 0.1
LSM4-206ENST00000600289 TEDDM1Q5T9Z0 273 aa15.65■□□□□ 0.1
LSM4-206ENST00000600289 ARHGAP40Q5TG30 622 aa15.65■□□□□ 0.1
LSM4-206ENST00000600289 TTC23LQ6PF05 361 aa15.65■□□□□ 0.1
LSM4-206ENST00000600289 CNSTQ6PJW8 725 aa15.65■□□□□ 0.1
LSM4-206ENST00000600289 SPESP1Q6UW49 350 aa15.65■□□□□ 0.1
LSM4-206ENST00000600289 PRICKLE2Q7Z3G6 844 aa15.65■□□□□ 0.1
LSM4-206ENST00000600289 RASGRP3Q8IV61 690 aa15.65■□□□□ 0.1
LSM4-206ENST00000600289 FBXO36Q8NEA4 188 aa15.65■□□□□ 0.1
LSM4-206ENST00000600289 OR2L8Q8NGY9 312 aa15.65■□□□□ 0.1
LSM4-206ENST00000600289 OR8K5Q8NH50 307 aa15.65■□□□□ 0.1
LSM4-206ENST00000600289 GIMAP7Q8NHV1 300 aa15.65■□□□□ 0.1
LSM4-206ENST00000600289 HMGCLL1Q8TB92 370 aa15.65■□□□□ 0.1
LSM4-206ENST00000600289 MAGEC3Q8TD91 643 aa15.65■□□□□ 0.1
LSM4-206ENST00000600289 SEC14L1Q92503 715 aa15.65■□□□□ 0.1
LSM4-206ENST00000600289 RAD51AP1Q96B01 352 aa15.65■□□□□ 0.1
LSM4-206ENST00000600289 TRIM44Q96DX7 344 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms