RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 C2P06681 752 aa18.32■□□□□ 0.52
CCDC9-205ENST00000600117 TPBGLP0DKB5 382 aa18.32■□□□□ 0.52
CCDC9-205ENST00000600117 GPR18Q14330 331 aa18.32■□□□□ 0.52
CCDC9-205ENST00000600117 GRB7Q14451 532 aa18.32■□□□□ 0.52
CCDC9-205ENST00000600117 LGSNQ5TDP6 509 aa18.32■□□□□ 0.52
CCDC9-205ENST00000600117 TIFABQ6ZNK6 161 aa18.32■□□□□ 0.52
CCDC9-205ENST00000600117 RBM12BQ8IXT5 1001 aaKnown RBP18.32■□□□□ 0.52
CCDC9-205ENST00000600117 MYO1HQ8N1T3 1032 aa18.32■□□□□ 0.52
CCDC9-205ENST00000600117 NKAPQ8N5F7 415 aaKnown RBP18.32■□□□□ 0.52
CCDC9-205ENST00000600117 OR5K2Q8NHB8 316 aa18.32■□□□□ 0.52
CCDC9-205ENST00000600117 ZFPM2Q8WW38 1151 aa18.32■□□□□ 0.52
CCDC9-205ENST00000600117 ASB11Q8WXH4 323 aa18.32■□□□□ 0.52
CCDC9-205ENST00000600117 SH3KBP1Q96B97 665 aa18.32■□□□□ 0.52
CCDC9-205ENST00000600117 MTBPQ96DY7 904 aa18.32■□□□□ 0.52
CCDC9-205ENST00000600117 UBXN10Q96LJ8 280 aa18.32■□□□□ 0.52
CCDC9-205ENST00000600117 HGH1Q9BTY7 390 aa18.32■□□□□ 0.52
CCDC9-205ENST00000600117 NRSN2Q9GZP1 204 aa18.32■□□□□ 0.52
CCDC9-205ENST00000600117 TRIT1Q9H3H1 467 aaKnown RBP18.32■□□□□ 0.52
CCDC9-205ENST00000600117 TBK1Q9UHD2 729 aa18.32■□□□□ 0.52
CCDC9-205ENST00000600117 COLEC10Q9Y6Z7 277 aa18.32■□□□□ 0.52
CCDC9-205ENST00000600117 IQANK1A0A1B0GTG1 560 aa18.31■□□□□ 0.52
CCDC9-205ENST00000600117 SMIM23A6NLE4 172 aa18.31■□□□□ 0.52
CCDC9-205ENST00000600117 ARHGEF33A8MVX0 844 aa18.31■□□□□ 0.52
CCDC9-205ENST00000600117 GFYI3L273 518 aa18.31■□□□□ 0.52
CCDC9-205ENST00000600117 RASGRF2O14827 1237 aa18.31■□□□□ 0.52
CCDC9-205ENST00000600117 CDH16O75309 829 aa18.31■□□□□ 0.52
CCDC9-205ENST00000600117 RFPL1O75677 317 aa18.31■□□□□ 0.52
CCDC9-205ENST00000600117 TYK2P29597 1187 aa18.31■□□□□ 0.52
CCDC9-205ENST00000600117 BDKRB1P46663 353 aa18.31■□□□□ 0.52
CCDC9-205ENST00000600117 ZNF844Q08AG5 666 aa18.31■□□□□ 0.52
CCDC9-205ENST00000600117 IFFO1Q0D2I5 559 aa18.31■□□□□ 0.52
CCDC9-205ENST00000600117 DLG1Q12959 904 aa18.31■□□□□ 0.52
CCDC9-205ENST00000600117 BIRC2Q13490 618 aa18.31■□□□□ 0.52
CCDC9-205ENST00000600117 CCSMST1Q4G0I0 132 aa18.31■□□□□ 0.52
CCDC9-205ENST00000600117 FBXO38Q6PIJ6 1188 aa18.31■□□□□ 0.52
CCDC9-205ENST00000600117 PCSK4Q6UW60 755 aa18.31■□□□□ 0.52
CCDC9-205ENST00000600117 DCUN1D3Q8IWE4 304 aa18.31■□□□□ 0.52
CCDC9-205ENST00000600117 CYP4X1Q8N118 509 aa18.31■□□□□ 0.52
CCDC9-205ENST00000600117 JPH3Q8WXH2 748 aaPredicted RBP18.31■□□□□ 0.52
CCDC9-205ENST00000600117 DLG3Q92796 817 aa18.31■□□□□ 0.52
CCDC9-205ENST00000600117 FOPNLQ96NB1 174 aa18.31■□□□□ 0.52
CCDC9-205ENST00000600117 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.31■□□□□ 0.52
CCDC9-205ENST00000600117 ROPN1BQ9BZX4 212 aaPredicted RBP18.31■□□□□ 0.52
CCDC9-205ENST00000600117 ROPN1Q9HAT0 212 aaPredicted RBP18.31■□□□□ 0.52
CCDC9-205ENST00000600117 A0A096LPK6 155 aa18.3■□□□□ 0.52
CCDC9-205ENST00000600117 CASC3O15234 703 aaKnown RBP18.3■□□□□ 0.52
CCDC9-205ENST00000600117 B4GAT1O43505 415 aa18.3■□□□□ 0.52
CCDC9-205ENST00000600117 RFPL3O75679 317 aa18.3■□□□□ 0.52
CCDC9-205ENST00000600117 GP1BAP07359 652 aa18.3■□□□□ 0.52
CCDC9-205ENST00000600117 CCDC166P0CW27 439 aa18.3■□□□□ 0.52
CCDC9-205ENST00000600117 GPR3P46089 330 aa18.3■□□□□ 0.52
CCDC9-205ENST00000600117 OR1D5P58170 312 aa18.3■□□□□ 0.52
CCDC9-205ENST00000600117 IRF9Q00978 393 aa18.3■□□□□ 0.52
CCDC9-205ENST00000600117 TARDBPQ13148 414 aaKnown RBP eCLIP18.3■□□□□ 0.52
CCDC9-205ENST00000600117 PRKG2Q13237 762 aa18.3■□□□□ 0.52
CCDC9-205ENST00000600117 KRT33BQ14525 404 aa18.3■□□□□ 0.52
CCDC9-205ENST00000600117 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.3■□□□□ 0.52
CCDC9-205ENST00000600117 RAPH1Q70E73 1250 aa18.3■□□□□ 0.52
CCDC9-205ENST00000600117 SPRED1Q7Z699 444 aa18.3■□□□□ 0.52
CCDC9-205ENST00000600117 CENPLQ8N0S6 344 aaPredicted RBP18.3■□□□□ 0.52
CCDC9-205ENST00000600117 CNPY4Q8N129 248 aa18.3■□□□□ 0.52
CCDC9-205ENST00000600117 RIBC1Q8N443 379 aaPredicted RBP18.3■□□□□ 0.52
CCDC9-205ENST00000600117 SPATA6LQ8N4H0 392 aa18.3■□□□□ 0.52
CCDC9-205ENST00000600117 FBXO15Q8NCQ5 510 aaPredicted RBP18.3■□□□□ 0.52
CCDC9-205ENST00000600117 OR52E1Q8NGJ3 308 aa18.3■□□□□ 0.52
CCDC9-205ENST00000600117 ANKRD7Q92527 254 aa18.3■□□□□ 0.52
CCDC9-205ENST00000600117 FGF11Q92914 225 aa18.3■□□□□ 0.52
CCDC9-205ENST00000600117 ZIM3Q96PE6 472 aa18.3■□□□□ 0.52
CCDC9-205ENST00000600117 SLC38A3Q99624 504 aa18.3■□□□□ 0.52
CCDC9-205ENST00000600117 NRTNQ99748 197 aa18.3■□□□□ 0.52
CCDC9-205ENST00000600117 CCDC3Q9BQI4 270 aa18.3■□□□□ 0.52
CCDC9-205ENST00000600117 TBC1D10AQ9BXI6 508 aa18.3■□□□□ 0.52
CCDC9-205ENST00000600117 DERL2Q9GZP9 239 aa18.3■□□□□ 0.52
CCDC9-205ENST00000600117 POLG2Q9UHN1 485 aa18.3■□□□□ 0.52
CCDC9-205ENST00000600117 LGALS13Q9UHV8 139 aa18.3■□□□□ 0.52
CCDC9-205ENST00000600117 ADAMTS6Q9UKP5 1117 aa18.3■□□□□ 0.52
CCDC9-205ENST00000600117 ACOT9Q9Y305 439 aa18.3■□□□□ 0.52
CCDC9-205ENST00000600117 A0A087X1B8 175 aa18.29■□□□□ 0.52
CCDC9-205ENST00000600117 TLDC2A0PJX2 215 aa18.29■□□□□ 0.52
CCDC9-205ENST00000600117 CATP04040 527 aaKnown RBP18.29■□□□□ 0.52
CCDC9-205ENST00000600117 RPN2P04844 631 aa18.29■□□□□ 0.52
CCDC9-205ENST00000600117 C8GP07360 202 aa18.29■□□□□ 0.52
CCDC9-205ENST00000600117 SLC26A3P40879 764 aa18.29■□□□□ 0.52
CCDC9-205ENST00000600117 CCNFP41002 786 aa18.29■□□□□ 0.52
CCDC9-205ENST00000600117 MAPK9P45984 424 aa18.29■□□□□ 0.52
CCDC9-205ENST00000600117 EPHA4P54764 986 aa18.29■□□□□ 0.52
CCDC9-205ENST00000600117 CLDN6P56747 220 aa18.29■□□□□ 0.52
CCDC9-205ENST00000600117 CCDC91Q7Z6B0 441 aa18.29■□□□□ 0.52
CCDC9-205ENST00000600117 Q8N9G6 341 aaPredicted RBP18.29■□□□□ 0.52
CCDC9-205ENST00000600117 KCTD4Q8WVF5 259 aa18.29■□□□□ 0.52
CCDC9-205ENST00000600117 MENTQ9BUN1 341 aa18.29■□□□□ 0.52
CCDC9-205ENST00000600117 TFB2MQ9H5Q4 396 aaKnown RBP18.29■□□□□ 0.52
CCDC9-205ENST00000600117 IGSF5Q9NSI5 407 aa18.29■□□□□ 0.52
CCDC9-205ENST00000600117 ARGLU1Q9NWB6 273 aaPredicted RBP18.29■□□□□ 0.52
CCDC9-205ENST00000600117 KCNK4Q9NYG8 393 aa18.29■□□□□ 0.52
CCDC9-205ENST00000600117 OGFRQ9NZT2 677 aa18.29■□□□□ 0.52
CCDC9-205ENST00000600117 IGHV1OR21-1A0A087WYE8 117 aa18.28■□□□□ 0.52
CCDC9-205ENST00000600117 KRT87PA6NCN2 255 aa18.28■□□□□ 0.52
CCDC9-205ENST00000600117 NPEPPSL1A6NEC2 478 aa18.28■□□□□ 0.52
CCDC9-205ENST00000600117 FOXO6A8MYZ6 492 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms