RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	SLC16A5	O15375	505 aa		21.35	■■□□□ 1.01
LTBP4-227	ENST00000600026	ZBTB14	O43829	449 aa		21.35	■■□□□ 1.01
LTBP4-227	ENST00000600026	MATN4	O95460	622 aa		21.35	■■□□□ 1.01
LTBP4-227	ENST00000600026	CAT	P04040	527 aa	Known RBP	21.35	■■□□□ 1.01
LTBP4-227	ENST00000600026	RPN2	P04844	631 aa		21.35	■■□□□ 1.01
LTBP4-227	ENST00000600026	CREB1	P16220	341 aa		21.35	■■□□□ 1.01
LTBP4-227	ENST00000600026	GLRB	P48167	497 aa		21.35	■■□□□ 1.01
LTBP4-227	ENST00000600026	SP140	Q13342	867 aa		21.35	■■□□□ 1.01
LTBP4-227	ENST00000600026	GPR18	Q14330	331 aa		21.35	■■□□□ 1.01
LTBP4-227	ENST00000600026	UNC5D	Q6UXZ4	953 aa		21.35	■■□□□ 1.01
LTBP4-227	ENST00000600026	ADAMTSL2	Q86TH1	951 aa		21.35	■■□□□ 1.01
LTBP4-227	ENST00000600026	STAG3L4	Q8TBR4	150 aa		21.35	■■□□□ 1.01
LTBP4-227	ENST00000600026	ASB11	Q8WXH4	323 aa		21.35	■■□□□ 1.01
LTBP4-227	ENST00000600026	KIAA1191	Q96A73	305 aa		21.35	■■□□□ 1.01
LTBP4-227	ENST00000600026	FERD3L	Q96RJ6	166 aa		21.35	■■□□□ 1.01
LTBP4-227	ENST00000600026	TBC1D10A	Q9BXI6	508 aa		21.35	■■□□□ 1.01
LTBP4-227	ENST00000600026	TRIM54	Q9BYV2	358 aa		21.35	■■□□□ 1.01
LTBP4-227	ENST00000600026	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	21.35	■■□□□ 1.01
LTBP4-227	ENST00000600026	UCK1	Q9HA47	277 aa		21.35	■■□□□ 1.01
LTBP4-227	ENST00000600026	ZNF358	Q9NW07	568 aa		21.35	■■□□□ 1.01
LTBP4-227	ENST00000600026	LILRA5	A6NI73	299 aa		21.34	■■□□□ 1.01
LTBP4-227	ENST00000600026	CDC7	O00311	574 aa		21.34	■■□□□ 1.01
LTBP4-227	ENST00000600026	PRPF4	O43172	522 aa	Known RBP eCLIP	21.34	■■□□□ 1.01
LTBP4-227	ENST00000600026	TOP3B	O95985	862 aa	Known RBP	21.34	■■□□□ 1.01
LTBP4-227	ENST00000600026	CYP2A7	P20853	494 aa		21.34	■■□□□ 1.01
LTBP4-227	ENST00000600026	NDUFS1	P28331	727 aa		21.34	■■□□□ 1.01
LTBP4-227	ENST00000600026	GPR3	P46089	330 aa		21.34	■■□□□ 1.01
LTBP4-227	ENST00000600026	OR1D5	P58170	312 aa		21.34	■■□□□ 1.01
LTBP4-227	ENST00000600026	CCL7	P80098	99 aa		21.34	■■□□□ 1.01
LTBP4-227	ENST00000600026	E2F1	Q01094	437 aa		21.34	■■□□□ 1.01
LTBP4-227	ENST00000600026	KRT33B	Q14525	404 aa		21.34	■■□□□ 1.01
LTBP4-227	ENST00000600026	CCDC153	Q494R4	210 aa		21.34	■■□□□ 1.01
LTBP4-227	ENST00000600026	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	21.34	■■□□□ 1.01
LTBP4-227	ENST00000600026	TTC23L	Q6PF05	361 aa		21.34	■■□□□ 1.01
LTBP4-227	ENST00000600026	DHRS13	Q6UX07	377 aa		21.34	■■□□□ 1.01
LTBP4-227	ENST00000600026	FRA10AC1	Q70Z53	315 aa		21.34	■■□□□ 1.01
LTBP4-227	ENST00000600026	UBE2R2	Q712K3	238 aa	Predicted RBP	21.34	■■□□□ 1.01
LTBP4-227	ENST00000600026	PHC3	Q8NDX5	983 aa		21.34	■■□□□ 1.01
LTBP4-227	ENST00000600026	OR5AR1	Q8NGP9	310 aa		21.34	■■□□□ 1.01
LTBP4-227	ENST00000600026	RHEBL1	Q8TAI7	183 aa		21.34	■■□□□ 1.01
LTBP4-227	ENST00000600026	GPR78	Q96P69	363 aa		21.34	■■□□□ 1.01
LTBP4-227	ENST00000600026	MRPL57	Q9BQC6	102 aa	Known RBP	21.34	■■□□□ 1.01
LTBP4-227	ENST00000600026	HGH1	Q9BTY7	390 aa		21.34	■■□□□ 1.01
LTBP4-227	ENST00000600026	ALG9	Q9H6U8	611 aa		21.34	■■□□□ 1.01
LTBP4-227	ENST00000600026	SYNDIG1	Q9H7V2	258 aa		21.34	■■□□□ 1.01
LTBP4-227	ENST00000600026	KCNK4	Q9NYG8	393 aa		21.34	■■□□□ 1.01
LTBP4-227	ENST00000600026	TMEM216	Q9P0N5	145 aa		21.34	■■□□□ 1.01
LTBP4-227	ENST00000600026	RNF112	Q9ULX5	631 aa		21.34	■■□□□ 1.01
LTBP4-227	ENST00000600026	ASF1A	Q9Y294	204 aa		21.34	■■□□□ 1.01
LTBP4-227	ENST00000600026	COLEC10	Q9Y6Z7	277 aa		21.34	■■□□□ 1.01
LTBP4-227	ENST00000600026	CNOT1	A5YKK6	2376 aa	Known RBP	21.33	■■□□□ 1.01
LTBP4-227	ENST00000600026		A0A1W2PQM1	296 aa		21.33	■■□□□ 1.01
LTBP4-227	ENST00000600026	B4GAT1	O43505	415 aa		21.33	■■□□□ 1.01
LTBP4-227	ENST00000600026	TYROBP	O43914	113 aa		21.33	■■□□□ 1.01
LTBP4-227	ENST00000600026	PSIP1	O75475	530 aa	Known RBP	21.33	■■□□□ 1.01
LTBP4-227	ENST00000600026	RPLP0	P05388	317 aa	Known RBP	21.33	■■□□□ 1.01
LTBP4-227	ENST00000600026	ENO2	P09104	434 aa	Predicted RBP	21.33	■■□□□ 1.01
LTBP4-227	ENST00000600026	MAP4	P27816	1152 aa	Known RBP	21.33	■■□□□ 1.01
LTBP4-227	ENST00000600026	ALDH4A1	P30038	563 aa		21.33	■■□□□ 1.01
LTBP4-227	ENST00000600026	TSN	Q15631	228 aa	Known RBP	21.33	■■□□□ 1.01
LTBP4-227	ENST00000600026	ISCA2	Q86U28	154 aa		21.33	■■□□□ 1.01
LTBP4-227	ENST00000600026	MAGEC3	Q8TD91	643 aa		21.33	■■□□□ 1.01
LTBP4-227	ENST00000600026	MCOLN3	Q8TDD5	553 aa		21.33	■■□□□ 1.01
LTBP4-227	ENST00000600026	JPH3	Q8WXH2	748 aa	Predicted RBP	21.33	■■□□□ 1.01
LTBP4-227	ENST00000600026	SELENOS	Q9BQE4	189 aa		21.33	■■□□□ 1.01
LTBP4-227	ENST00000600026	MRPL46	Q9H2W6	279 aa	Known RBP	21.33	■■□□□ 1.01
LTBP4-227	ENST00000600026	TRIT1	Q9H3H1	467 aa	Known RBP	21.33	■■□□□ 1.01
LTBP4-227	ENST00000600026	LRRN3	Q9H3W5	708 aa		21.33	■■□□□ 1.01
LTBP4-227	ENST00000600026	KIR3DX1	Q9H7L2	352 aa		21.33	■■□□□ 1.01
LTBP4-227	ENST00000600026	MVB12B	Q9H7P6	319 aa		21.33	■■□□□ 1.01
LTBP4-227	ENST00000600026	MID2	Q9UJV3	735 aa		21.33	■■□□□ 1.01
LTBP4-227	ENST00000600026	PLLP	Q9Y342	182 aa		21.33	■■□□□ 1.01
LTBP4-227	ENST00000600026	PTPRB	P23467	1997 aa		21.33	■■□□□ 1.01
LTBP4-227	ENST00000600026	IGHV1OR21-1	A0A087WYE8	117 aa		21.32	■■□□□ 1
LTBP4-227	ENST00000600026	SYCE1L	A8MT33	242 aa		21.32	■■□□□ 1
LTBP4-227	ENST00000600026	GFY	I3L273	518 aa		21.32	■■□□□ 1
LTBP4-227	ENST00000600026	TM9SF1	O15321	606 aa		21.32	■■□□□ 1
LTBP4-227	ENST00000600026	ZWINT	O95229	277 aa		21.32	■■□□□ 1
LTBP4-227	ENST00000600026	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	21.32	■■□□□ 1
LTBP4-227	ENST00000600026	CDK4	P11802	303 aa		21.32	■■□□□ 1
LTBP4-227	ENST00000600026	HIST1H2AD	P20671	130 aa		21.32	■■□□□ 1
LTBP4-227	ENST00000600026	HPD	P32754	393 aa	Predicted RBP	21.32	■■□□□ 1
LTBP4-227	ENST00000600026	EPHA4	P54764	986 aa		21.32	■■□□□ 1
LTBP4-227	ENST00000600026	INSM1	Q01101	510 aa	Predicted RBP	21.32	■■□□□ 1
LTBP4-227	ENST00000600026	TECRL	Q5HYJ1	363 aa		21.32	■■□□□ 1
LTBP4-227	ENST00000600026	C16orf46	Q6P387	395 aa		21.32	■■□□□ 1
LTBP4-227	ENST00000600026	CDHR3	Q6ZTQ4	885 aa		21.32	■■□□□ 1
LTBP4-227	ENST00000600026	GPSM1	Q86YR5	675 aa		21.32	■■□□□ 1
LTBP4-227	ENST00000600026	TBC1D21	Q8IYX1	336 aa		21.32	■■□□□ 1
LTBP4-227	ENST00000600026	CCDC63	Q8NA47	563 aa		21.32	■■□□□ 1
LTBP4-227	ENST00000600026	OR5K2	Q8NHB8	316 aa		21.32	■■□□□ 1
LTBP4-227	ENST00000600026	TCP10L	Q8TDR4	215 aa		21.32	■■□□□ 1
LTBP4-227	ENST00000600026	ZFPM2	Q8WW38	1151 aa		21.32	■■□□□ 1
LTBP4-227	ENST00000600026	PTER	Q96BW5	349 aa		21.32	■■□□□ 1
LTBP4-227	ENST00000600026	HIST1H2AH	Q96KK5	128 aa		21.32	■■□□□ 1
LTBP4-227	ENST00000600026	HIST1H2AJ	Q99878	128 aa		21.32	■■□□□ 1
LTBP4-227	ENST00000600026	H2AFJ	Q9BTM1	129 aa		21.32	■■□□□ 1
LTBP4-227	ENST00000600026	SLC12A9	Q9BXP2	914 aa		21.32	■■□□□ 1
LTBP4-227	ENST00000600026	ABCG4	Q9H172	646 aa		21.32	■■□□□ 1
LTBP4-227	ENST00000600026	PARVB	Q9HBI1	364 aa		21.32	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms