RNA–Protein interactions for RNA: ENST00000599560.5

NUP62-216, Transcript of nucleoporin 62, human

TSL 2

Gene NUP62, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-216	ENST00000599560	PRAMEF1	O95521	474 aa		11.59	□□□□□ -0.55
NUP62-216	ENST00000599560	ITGAM	P11215	1152 aa		11.59	□□□□□ -0.55
NUP62-216	ENST00000599560	PEBP1	P30086	187 aa	Known RBP	11.59	□□□□□ -0.55
NUP62-216	ENST00000599560	HMGCL	P35914	325 aa		11.59	□□□□□ -0.55
NUP62-216	ENST00000599560	CACNG1	Q06432	222 aa		11.59	□□□□□ -0.55
NUP62-216	ENST00000599560	KLC1	Q07866	573 aa		11.59	□□□□□ -0.55
NUP62-216	ENST00000599560	OLIG2	Q13516	323 aa		11.59	□□□□□ -0.55
NUP62-216	ENST00000599560	SLC5A12	Q1EHB4	618 aa		11.59	□□□□□ -0.55
NUP62-216	ENST00000599560	DPCR1	Q3MIW9	517 aa		11.59	□□□□□ -0.55
NUP62-216	ENST00000599560	ZNF658B	Q4V348	819 aa	Predicted RBP	11.59	□□□□□ -0.55
NUP62-216	ENST00000599560	BOLA3	Q53S33	107 aa		11.59	□□□□□ -0.55
NUP62-216	ENST00000599560	LDLRAP1	Q5SW96	308 aa		11.59	□□□□□ -0.55
NUP62-216	ENST00000599560	ATG9B	Q674R7	924 aa		11.59	□□□□□ -0.55
NUP62-216	ENST00000599560	LAPTM4B	Q86VI4	370 aa		11.59	□□□□□ -0.55
NUP62-216	ENST00000599560	DMRTC2	Q8IXT2	367 aa	Predicted RBP	11.59	□□□□□ -0.55
NUP62-216	ENST00000599560	KBTBD2	Q8IY47	623 aa		11.59	□□□□□ -0.55
NUP62-216	ENST00000599560	ANKRD20A12P	Q8NF67	263 aa		11.59	□□□□□ -0.55
NUP62-216	ENST00000599560	FAM71B	Q8TC56	605 aa		11.59	□□□□□ -0.55
NUP62-216	ENST00000599560	IMP4	Q96G21	291 aa	Known RBP	11.59	□□□□□ -0.55
NUP62-216	ENST00000599560	ZNF559	Q9BR84	538 aa		11.59	□□□□□ -0.55
NUP62-216	ENST00000599560	OR52A5	Q9H2C5	316 aa		11.59	□□□□□ -0.55
NUP62-216	ENST00000599560	ST6GALNAC2	Q9UJ37	374 aa		11.59	□□□□□ -0.55
NUP62-216	ENST00000599560	PLEKHA6	Q9Y2H5	1048 aa		11.59	□□□□□ -0.55
NUP62-216	ENST00000599560	MRPS2	Q9Y399	296 aa	Known RBP	11.59	□□□□□ -0.55
NUP62-216	ENST00000599560	NBEAL1	Q6ZS30	2694 aa		11.58	□□□□□ -0.56
NUP62-216	ENST00000599560	NPIPA5	E9PKD4	350 aa		11.58	□□□□□ -0.56
NUP62-216	ENST00000599560	PROM1	O43490	865 aa		11.58	□□□□□ -0.56
NUP62-216	ENST00000599560	USP1	O94782	785 aa		11.58	□□□□□ -0.56
NUP62-216	ENST00000599560	TOX	O94900	526 aa		11.58	□□□□□ -0.56
NUP62-216	ENST00000599560	ALB	P02768	609 aa		11.58	□□□□□ -0.56
NUP62-216	ENST00000599560	ACPP	P15309	386 aa		11.58	□□□□□ -0.56
NUP62-216	ENST00000599560	SPAM1	P38567	509 aa		11.58	□□□□□ -0.56
NUP62-216	ENST00000599560	CHRNA4	P43681	627 aa		11.58	□□□□□ -0.56
NUP62-216	ENST00000599560	EEF1A2	Q05639	463 aa	Known RBP	11.58	□□□□□ -0.56
NUP62-216	ENST00000599560	DPYSL3	Q14195	570 aa		11.58	□□□□□ -0.56
NUP62-216	ENST00000599560	PPP2R5E	Q16537	467 aa		11.58	□□□□□ -0.56
NUP62-216	ENST00000599560	CCDC122	Q5T0U0	273 aa		11.58	□□□□□ -0.56
NUP62-216	ENST00000599560	UNC5A	Q6ZN44	842 aa		11.58	□□□□□ -0.56
NUP62-216	ENST00000599560	ARHGEF18	Q6ZSZ5	1173 aa		11.58	□□□□□ -0.56
NUP62-216	ENST00000599560	IRF2BP2	Q7Z5L9	587 aa		11.58	□□□□□ -0.56
NUP62-216	ENST00000599560	BIVM	Q86UB2	503 aa		11.58	□□□□□ -0.56
NUP62-216	ENST00000599560	SIAH3	Q8IW03	269 aa		11.58	□□□□□ -0.56
NUP62-216	ENST00000599560	PQLC3	Q8N755	202 aa		11.58	□□□□□ -0.56
NUP62-216	ENST00000599560	CCDC110	Q8TBZ0	833 aa		11.58	□□□□□ -0.56
NUP62-216	ENST00000599560	THAP3	Q8WTV1	239 aa	Predicted RBP	11.58	□□□□□ -0.56
NUP62-216	ENST00000599560	PHF10	Q8WUB8	498 aa	Known RBP	11.58	□□□□□ -0.56
NUP62-216	ENST00000599560	NINJ1	Q92982	152 aa		11.58	□□□□□ -0.56
NUP62-216	ENST00000599560	CRB3	Q9BUF7	120 aa		11.58	□□□□□ -0.56
NUP62-216	ENST00000599560	ZCCHC2	Q9C0B9	1178 aa	Known RBP	11.58	□□□□□ -0.56
NUP62-216	ENST00000599560	EURL	Q9NYK6	297 aa		11.58	□□□□□ -0.56
NUP62-216	ENST00000599560	UBP1	Q9NZI7	540 aa		11.58	□□□□□ -0.56
NUP62-216	ENST00000599560	IL17C	Q9P0M4	197 aa		11.58	□□□□□ -0.56
NUP62-216	ENST00000599560	STOX2	Q9P2F5	926 aa	Predicted RBP	11.58	□□□□□ -0.56
NUP62-216	ENST00000599560	MYO1A	Q9UBC5	1043 aa		11.58	□□□□□ -0.56
NUP62-216	ENST00000599560	PPT2	Q9UMR5	302 aa		11.58	□□□□□ -0.56
NUP62-216	ENST00000599560	NPIPA1	Q9UND3	350 aa		11.58	□□□□□ -0.56
NUP62-216	ENST00000599560	PHF3	Q92576	2039 aa	Known RBP	11.58	□□□□□ -0.56
NUP62-216	ENST00000599560	DNAJC13	O75165	2243 aa		11.58	□□□□□ -0.56
NUP62-216	ENST00000599560		A0A0J9YY10	115 aa		11.57	□□□□□ -0.56
NUP62-216	ENST00000599560	GLYATL1P3	A0A0U1RQE8	302 aa		11.57	□□□□□ -0.56
NUP62-216	ENST00000599560	OR5H15	A6NDH6	313 aa		11.57	□□□□□ -0.56
NUP62-216	ENST00000599560	FAM90A27P	A6NNH2	459 aa		11.57	□□□□□ -0.56
NUP62-216	ENST00000599560	MAP2K7	O14733	419 aa		11.57	□□□□□ -0.56
NUP62-216	ENST00000599560	DSCR3	O14972	297 aa		11.57	□□□□□ -0.56
NUP62-216	ENST00000599560	NDST3	O95803	873 aa		11.57	□□□□□ -0.56
NUP62-216	ENST00000599560	CHRM5	P08912	532 aa	Predicted RBP	11.57	□□□□□ -0.56
NUP62-216	ENST00000599560	MSH3	P20585	1137 aa		11.57	□□□□□ -0.56
NUP62-216	ENST00000599560	MSX1	P28360	303 aa		11.57	□□□□□ -0.56
NUP62-216	ENST00000599560	AKT1	P31749	480 aa		11.57	□□□□□ -0.56
NUP62-216	ENST00000599560	EFNA3	P52797	238 aa		11.57	□□□□□ -0.56
NUP62-216	ENST00000599560	IFI35	P80217	286 aa	Predicted RBP	11.57	□□□□□ -0.56
NUP62-216	ENST00000599560	FOLH1	Q04609	750 aa		11.57	□□□□□ -0.56
NUP62-216	ENST00000599560	KRT81	Q14533	505 aa		11.57	□□□□□ -0.56
NUP62-216	ENST00000599560	KRT31	Q15323	416 aa		11.57	□□□□□ -0.56
NUP62-216	ENST00000599560	LONRF2	Q1L5Z9	754 aa		11.57	□□□□□ -0.56
NUP62-216	ENST00000599560	BCL7A	Q4VC05	210 aa		11.57	□□□□□ -0.56
NUP62-216	ENST00000599560	TFDP3	Q5H9I0	405 aa		11.57	□□□□□ -0.56
NUP62-216	ENST00000599560	ZNF766	Q5HY98	468 aa		11.57	□□□□□ -0.56
NUP62-216	ENST00000599560	MLKL	Q8NB16	471 aa		11.57	□□□□□ -0.56
NUP62-216	ENST00000599560	CCNY	Q8ND76	341 aa		11.57	□□□□□ -0.56
NUP62-216	ENST00000599560	LINC00615	Q96LM1	132 aa	Predicted RBP	11.57	□□□□□ -0.56
NUP62-216	ENST00000599560	SIGLEC12	Q96PQ1	595 aa		11.57	□□□□□ -0.56
NUP62-216	ENST00000599560	TRIM51	Q9BSJ1	452 aa		11.57	□□□□□ -0.56
NUP62-216	ENST00000599560	CHRNA10	Q9GZZ6	450 aa		11.57	□□□□□ -0.56
NUP62-216	ENST00000599560	CUTC	Q9NTM9	273 aa		11.57	□□□□□ -0.56
NUP62-216	ENST00000599560	PLAGL1	Q9UM63	463 aa		11.57	□□□□□ -0.56
NUP62-216	ENST00000599560	PLCL2	Q9UPR0	1127 aa		11.57	□□□□□ -0.56
NUP62-216	ENST00000599560	ASB1	Q9Y576	335 aa		11.57	□□□□□ -0.56
NUP62-216	ENST00000599560	ATR	Q13535	2644 aa		11.56	□□□□□ -0.56
NUP62-216	ENST00000599560	NSG1	A0A0A6YYJ2	146 aa		11.56	□□□□□ -0.56
NUP62-216	ENST00000599560		E9PLN8	166 aa		11.56	□□□□□ -0.56
NUP62-216	ENST00000599560	FFAR3	O14843	346 aa		11.56	□□□□□ -0.56
NUP62-216	ENST00000599560	GPR42	O15529	346 aa		11.56	□□□□□ -0.56
NUP62-216	ENST00000599560	PMPCB	O75439	489 aa		11.56	□□□□□ -0.56
NUP62-216	ENST00000599560	FTL	P02792	175 aa	Predicted RBP	11.56	□□□□□ -0.56
NUP62-216	ENST00000599560	SERPINA7	P05543	415 aa		11.56	□□□□□ -0.56
NUP62-216	ENST00000599560	MAG	P20916	626 aa		11.56	□□□□□ -0.56
NUP62-216	ENST00000599560	GRIA3	P42263	894 aa		11.56	□□□□□ -0.56
NUP62-216	ENST00000599560	NSG1	P42857	185 aa		11.56	□□□□□ -0.56
NUP62-216	ENST00000599560	MEOX1	P50221	254 aa		11.56	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms