RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 ABCA7Q8IZY2 2146 aa15.03■□□□□ -0
UPF1-206ENST00000598471 AFAP1L2Q8N4X5 818 aa15.03■□□□□ -0
UPF1-206ENST00000598471 CCL4L1Q8NHW4 92 aa15.03■□□□□ -0
UPF1-206ENST00000598471 LMX1AQ8TE12 382 aa15.03■□□□□ -0
UPF1-206ENST00000598471 ZNF483Q8TF39 744 aaPredicted RBP15.03■□□□□ -0
UPF1-206ENST00000598471 GRAMD1AQ96CP6 724 aa15.03■□□□□ -0
UPF1-206ENST00000598471 PHOX2BQ99453 314 aa15.03■□□□□ -0
UPF1-206ENST00000598471 TMEM79Q9BSE2 394 aa15.03■□□□□ -0
UPF1-206ENST00000598471 HGH1Q9BTY7 390 aa15.03■□□□□ -0
UPF1-206ENST00000598471 FAM107BQ9H098 131 aa15.03■□□□□ -0
UPF1-206ENST00000598471 GSTO2Q9H4Y5 243 aa15.03■□□□□ -0
UPF1-206ENST00000598471 SLCO1B3Q9NPD5 702 aa15.03■□□□□ -0
UPF1-206ENST00000598471 STOX2Q9P2F5 926 aaPredicted RBP15.03■□□□□ -0
UPF1-206ENST00000598471 PCTPQ9UKL6 214 aa15.03■□□□□ -0
UPF1-206ENST00000598471 RAB23Q9ULC3 237 aa15.03■□□□□ -0
UPF1-206ENST00000598471 TDRKHQ9Y2W6 561 aaKnown RBP15.03■□□□□ -0
UPF1-206ENST00000598471 ST14Q9Y5Y6 855 aa15.03■□□□□ -0
UPF1-206ENST00000598471 CFAP20Q9Y6A4 193 aaKnown RBP15.03■□□□□ -0
UPF1-206ENST00000598471 R4GN57 208 aa15.03■□□□□ -0
UPF1-206ENST00000598471 KIR2DS5A0A0G2JLQ3 304 aa15.02■□□□□ -0
UPF1-206ENST00000598471 A0A0G2JNG1 304 aa15.02■□□□□ -0
UPF1-206ENST00000598471 A6NCN8 305 aa15.02■□□□□ -0
UPF1-206ENST00000598471 OR52A4PA6NMU1 304 aa15.02■□□□□ -0
UPF1-206ENST00000598471 KIR2DS3K7RE56 304 aa15.02■□□□□ -0
UPF1-206ENST00000598471 TAPBPO15533 448 aa15.02■□□□□ -0
UPF1-206ENST00000598471 AQP9O43315 295 aa15.02■□□□□ -0
UPF1-206ENST00000598471 CCNT2O60583 730 aaKnown RBP15.02■□□□□ -0
UPF1-206ENST00000598471 KATNA1O75449 491 aa15.02■□□□□ -0
UPF1-206ENST00000598471 TROVE2P10155 538 aaKnown RBP eCLIP15.02■□□□□ -0
UPF1-206ENST00000598471 AGTR2P50052 363 aa15.02■□□□□ -0
UPF1-206ENST00000598471 CLCQ05315 142 aa15.02■□□□□ -0
UPF1-206ENST00000598471 LCP2Q13094 533 aa15.02■□□□□ -0
UPF1-206ENST00000598471 C1orf61Q13536 156 aa15.02■□□□□ -0
UPF1-206ENST00000598471 KIR2DS5Q14953 304 aa15.02■□□□□ -0
UPF1-206ENST00000598471 ARHGAP19Q14CB8 494 aa15.02■□□□□ -0
UPF1-206ENST00000598471 RBBP7Q16576 425 aa15.02■□□□□ -0
UPF1-206ENST00000598471 CCSMST1Q4G0I0 132 aa15.02■□□□□ -0
UPF1-206ENST00000598471 ARL13AQ5H913 290 aaPredicted RBP15.02■□□□□ -0
UPF1-206ENST00000598471 AGTRAPQ6RW13 159 aa15.02■□□□□ -0
UPF1-206ENST00000598471 SYTL1Q8IYJ3 562 aa15.02■□□□□ -0
UPF1-206ENST00000598471 AVL9Q8NBF6 648 aa15.02■□□□□ -0
UPF1-206ENST00000598471 ILKAPQ9H0C8 392 aaPredicted RBP15.02■□□□□ -0
UPF1-206ENST00000598471 SLC32A1Q9H598 525 aa15.02■□□□□ -0
UPF1-206ENST00000598471 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.02■□□□□ -0
UPF1-206ENST00000598471 RAP2CQ9Y3L5 183 aa15.02■□□□□ -0
UPF1-206ENST00000598471 LRRC14BA6NHZ5 514 aa15.01□□□□□ -0.01
UPF1-206ENST00000598471 ITM2AO43736 263 aa15.01□□□□□ -0.01
UPF1-206ENST00000598471 LYPLA1O75608 230 aaPredicted RBP15.01□□□□□ -0.01
UPF1-206ENST00000598471 WDR47O94967 919 aa15.01□□□□□ -0.01
UPF1-206ENST00000598471 SLC16A8O95907 504 aa15.01□□□□□ -0.01
UPF1-206ENST00000598471 CFIP05156 583 aa15.01□□□□□ -0.01
UPF1-206ENST00000598471 ANXA6P08133 673 aa15.01□□□□□ -0.01
UPF1-206ENST00000598471 EPB42P16452 691 aa15.01□□□□□ -0.01
UPF1-206ENST00000598471 DRD4P21917 467 aa15.01□□□□□ -0.01
UPF1-206ENST00000598471 CCND1P24385 295 aa15.01□□□□□ -0.01
UPF1-206ENST00000598471 IMPA1P29218 277 aa15.01□□□□□ -0.01
UPF1-206ENST00000598471 SLC6A12P48065 614 aa15.01□□□□□ -0.01
UPF1-206ENST00000598471 HK2P52789 917 aa15.01□□□□□ -0.01
UPF1-206ENST00000598471 PNLIPRP1P54315 467 aa15.01□□□□□ -0.01
UPF1-206ENST00000598471 PRKG2Q13237 762 aa15.01□□□□□ -0.01
UPF1-206ENST00000598471 GTF2H2Q13888 395 aa15.01□□□□□ -0.01
UPF1-206ENST00000598471 KIF19Q2TAC6 998 aa15.01□□□□□ -0.01
UPF1-206ENST00000598471 FBXO48Q5FWF7 155 aa15.01□□□□□ -0.01
UPF1-206ENST00000598471 CES4AQ5XG92 561 aa15.01□□□□□ -0.01
UPF1-206ENST00000598471 CAPN13Q6MZZ7 669 aaPredicted RBP15.01□□□□□ -0.01
UPF1-206ENST00000598471 GTF2H2CQ6P1K8 395 aa15.01□□□□□ -0.01
UPF1-206ENST00000598471 DUS1LQ6P1R4 473 aaKnown RBP15.01□□□□□ -0.01
UPF1-206ENST00000598471 GOLGA7Q7Z5G4 137 aa15.01□□□□□ -0.01
UPF1-206ENST00000598471 KLHDC8AQ8IYD2 350 aa15.01□□□□□ -0.01
UPF1-206ENST00000598471 TEX9Q8N6V9 391 aa15.01□□□□□ -0.01
UPF1-206ENST00000598471 ZNF548Q8NEK5 533 aaPredicted RBP15.01□□□□□ -0.01
UPF1-206ENST00000598471 FAM46DQ8NEK8 389 aa15.01□□□□□ -0.01
UPF1-206ENST00000598471 ZFPM2Q8WW38 1151 aa15.01□□□□□ -0.01
UPF1-206ENST00000598471 LOXL4Q96JB6 756 aa15.01□□□□□ -0.01
UPF1-206ENST00000598471 CAMK1GQ96NX5 476 aa15.01□□□□□ -0.01
UPF1-206ENST00000598471 ELF4Q99607 663 aaPredicted RBP15.01□□□□□ -0.01
UPF1-206ENST00000598471 STN1Q9H668 368 aaKnown RBP15.01□□□□□ -0.01
UPF1-206ENST00000598471 TMEM74BQ9NUR3 256 aa15.01□□□□□ -0.01
UPF1-206ENST00000598471 POT1Q9NUX5 634 aa15.01□□□□□ -0.01
UPF1-206ENST00000598471 DNAJC11Q9NVH1 559 aa15.01□□□□□ -0.01
UPF1-206ENST00000598471 SNX11Q9Y5W9 270 aa15.01□□□□□ -0.01
UPF1-206ENST00000598471 LMO7DNF2Z398 122 aa15□□□□□ -0.01
UPF1-206ENST00000598471 E2F3O00716 465 aa15□□□□□ -0.01
UPF1-206ENST00000598471 YKT6O15498 198 aa15□□□□□ -0.01
UPF1-206ENST00000598471 DFNA5O60443 496 aa15□□□□□ -0.01
UPF1-206ENST00000598471 PIAS2O75928 621 aa15□□□□□ -0.01
UPF1-206ENST00000598471 TGDSO95455 350 aa15□□□□□ -0.01
UPF1-206ENST00000598471 FAM107AO95990 144 aa15□□□□□ -0.01
UPF1-206ENST00000598471 VIPP01282 170 aa15□□□□□ -0.01
UPF1-206ENST00000598471 CELA2BP08218 269 aaPredicted RBP15□□□□□ -0.01
UPF1-206ENST00000598471 ARL1P40616 181 aaPredicted RBP15□□□□□ -0.01
UPF1-206ENST00000598471 CDH13P55290 713 aa15□□□□□ -0.01
UPF1-206ENST00000598471 PKNOX1P55347 436 aa15□□□□□ -0.01
UPF1-206ENST00000598471 NHLH1Q02575 133 aa15□□□□□ -0.01
UPF1-206ENST00000598471 GABPB1Q06547 395 aaPredicted RBP15□□□□□ -0.01
UPF1-206ENST00000598471 NAE1Q13564 534 aa15□□□□□ -0.01
UPF1-206ENST00000598471 C18orf21Q32NC0 220 aaPredicted RBP15□□□□□ -0.01
UPF1-206ENST00000598471 PTCHD3Q3KNS1 767 aa15□□□□□ -0.01
UPF1-206ENST00000598471 IYDQ6PHW0 289 aa15□□□□□ -0.01
UPF1-206ENST00000598471 IL27RAQ6UWB1 636 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms