RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 CYP4X1Q8N118 509 aa21.46■■□□□ 1.03
CHMP2A-204ENST00000597848 FBXO15Q8NCQ5 510 aaPredicted RBP21.46■■□□□ 1.03
CHMP2A-204ENST00000597848 RSC1A1Q92681 617 aa21.46■■□□□ 1.03
CHMP2A-204ENST00000597848 NXNL1Q96CM4 212 aa21.46■■□□□ 1.03
CHMP2A-204ENST00000597848 IL17FQ96PD4 163 aa21.46■■□□□ 1.03
CHMP2A-204ENST00000597848 OGFRQ9NZT2 677 aa21.46■■□□□ 1.03
CHMP2A-204ENST00000597848 MYO1CO00159 1063 aa21.45■■□□□ 1.02
CHMP2A-204ENST00000597848 NTN3O00634 580 aaPredicted RBP21.45■■□□□ 1.02
CHMP2A-204ENST00000597848 RFPL1O75677 317 aa21.45■■□□□ 1.02
CHMP2A-204ENST00000597848 DKK1O94907 266 aa21.45■■□□□ 1.02
CHMP2A-204ENST00000597848 POLR2CP19387 275 aaPredicted RBP21.45■■□□□ 1.02
CHMP2A-204ENST00000597848 CAPZBP47756 277 aa21.45■■□□□ 1.02
CHMP2A-204ENST00000597848 CSRP3P50461 194 aa21.45■■□□□ 1.02
CHMP2A-204ENST00000597848 RAB28P51157 221 aa21.45■■□□□ 1.02
CHMP2A-204ENST00000597848 DLG1Q12959 904 aa21.45■■□□□ 1.02
CHMP2A-204ENST00000597848 TSNQ15631 228 aaKnown RBP21.45■■□□□ 1.02
CHMP2A-204ENST00000597848 PHKG1Q16816 387 aa21.45■■□□□ 1.02
CHMP2A-204ENST00000597848 FAM83EQ2M2I3 478 aa21.45■■□□□ 1.02
CHMP2A-204ENST00000597848 IQCKQ8N0W5 287 aa21.45■■□□□ 1.02
CHMP2A-204ENST00000597848 RIBC1Q8N443 379 aaPredicted RBP21.45■■□□□ 1.02
CHMP2A-204ENST00000597848 C2orf73Q8N5S3 287 aaPredicted RBP21.45■■□□□ 1.02
CHMP2A-204ENST00000597848 CABS1Q96KC9 395 aa21.45■■□□□ 1.02
CHMP2A-204ENST00000597848 TSNARE1Q96NA8 513 aa21.45■■□□□ 1.02
CHMP2A-204ENST00000597848 NUDT22Q9BRQ3 303 aa21.45■■□□□ 1.02
CHMP2A-204ENST00000597848 TMEM109Q9BVC6 243 aa21.45■■□□□ 1.02
CHMP2A-204ENST00000597848 RAB11FIP5Q9BXF6 653 aa21.45■■□□□ 1.02
CHMP2A-204ENST00000597848 IGSF5Q9NSI5 407 aa21.45■■□□□ 1.02
CHMP2A-204ENST00000597848 UTP6Q9NYH9 597 aaKnown RBP21.45■■□□□ 1.02
CHMP2A-204ENST00000597848 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.45■■□□□ 1.02
CHMP2A-204ENST00000597848 RP1P56715 2156 aa21.45■■□□□ 1.02
CHMP2A-204ENST00000597848 DNAH14Q0VDD8 3507 aa21.45■■□□□ 1.02
CHMP2A-204ENST00000597848 GSAPA4D1B5 854 aa21.44■■□□□ 1.02
CHMP2A-204ENST00000597848 FAM221BA6H8Z2 402 aa21.44■■□□□ 1.02
CHMP2A-204ENST00000597848 OR5K3A6NET4 321 aa21.44■■□□□ 1.02
CHMP2A-204ENST00000597848 BTN3A3O00478 584 aa21.44■■□□□ 1.02
CHMP2A-204ENST00000597848 KLHL2O95198 593 aa21.44■■□□□ 1.02
CHMP2A-204ENST00000597848 PKLRP30613 574 aa21.44■■□□□ 1.02
CHMP2A-204ENST00000597848 CLDN6P56747 220 aa21.44■■□□□ 1.02
CHMP2A-204ENST00000597848 ZNF844Q08AG5 666 aa21.44■■□□□ 1.02
CHMP2A-204ENST00000597848 SQSTM1Q13501 440 aa21.44■■□□□ 1.02
CHMP2A-204ENST00000597848 KRT71Q3SY84 523 aa21.44■■□□□ 1.02
CHMP2A-204ENST00000597848 IRGCQ6NXR0 463 aa21.44■■□□□ 1.02
CHMP2A-204ENST00000597848 KLC3Q6P597 504 aa21.44■■□□□ 1.02
CHMP2A-204ENST00000597848 RBM44Q6ZP01 1051 aaKnown RBP21.44■■□□□ 1.02
CHMP2A-204ENST00000597848 FRA10AC1Q70Z53 315 aa21.44■■□□□ 1.02
CHMP2A-204ENST00000597848 ADAMTSL2Q86TH1 951 aa21.44■■□□□ 1.02
CHMP2A-204ENST00000597848 PLXDC1Q8IUK5 500 aa21.44■■□□□ 1.02
CHMP2A-204ENST00000597848 LMNTD1Q8N9Z9 388 aa21.44■■□□□ 1.02
CHMP2A-204ENST00000597848 CCDC138Q96M89 665 aa21.44■■□□□ 1.02
CHMP2A-204ENST00000597848 ZIM3Q96PE6 472 aa21.44■■□□□ 1.02
CHMP2A-204ENST00000597848 PCMTD2Q9NV79 361 aa21.44■■□□□ 1.02
CHMP2A-204ENST00000597848 ARL15Q9NXU5 204 aa21.44■■□□□ 1.02
CHMP2A-204ENST00000597848 OR6C2Q9NZP2 312 aa21.44■■□□□ 1.02
CHMP2A-204ENST00000597848 SPATA7Q9P0W8 599 aa21.44■■□□□ 1.02
CHMP2A-204ENST00000597848 NOVA2Q9UNW9 492 aaKnown RBP21.44■■□□□ 1.02
CHMP2A-204ENST00000597848 CNOT1A5YKK6 2376 aaKnown RBP21.44■■□□□ 1.02
CHMP2A-204ENST00000597848 A0A1W2PPM1 405 aa21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 FOXO6A8MYZ6 492 aa21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 D6RAR5 112 aa21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 GOLGA8RI6L899 631 aa21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 CAPN5O15484 640 aaPredicted RBP21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 MT-CO3P00414 261 aa21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 CHRM5P08912 532 aaPredicted RBP21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 ENO2P09104 434 aaPredicted RBP21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 HOXB3P14651 431 aaPredicted RBP21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 TFEBP19484 476 aa21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 MPSTP25325 297 aa21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 CSF2RBP32927 897 aa21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 GLRBP48167 497 aa21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 CFHR1Q03591 330 aa21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 CLPPQ16740 277 aaPredicted RBP21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 SNAP47Q5SQN1 464 aa21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 CEP85LQ5SZL2 805 aa21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 HES3Q5TGS1 186 aa21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 ANKS6Q68DC2 871 aa21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 WDR74Q6RFH5 385 aaPredicted RBP21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 SBSNQ6UWP8 590 aa21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 DGLUCYQ7Z3D6 616 aa21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 TAX1BP1Q86VP1 789 aa21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 ADGRF3Q8IZF5 1079 aa21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 CENPLQ8N0S6 344 aaPredicted RBP21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 OR2L8Q8NGY9 312 aa21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 MZB1Q8WU39 189 aa21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 ADAMTS14Q8WXS8 1223 aa21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 ZBTB9Q96C00 473 aa21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 TGM7Q96PF1 710 aa21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 DPYSL5Q9BPU6 564 aa21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 ALG9Q9H6U8 611 aa21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 EURLQ9NYK6 297 aa21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 KLHL3Q9UH77 587 aa21.43■■□□□ 1.02
CHMP2A-204ENST00000597848 PIPSLA2A3N6 862 aa21.42■■□□□ 1.02
CHMP2A-204ENST00000597848 ISM1B1AKI9 464 aa21.42■■□□□ 1.02
CHMP2A-204ENST00000597848 GUCA1CO95843 209 aa21.42■■□□□ 1.02
CHMP2A-204ENST00000597848 PYGBP11216 843 aa21.42■■□□□ 1.02
CHMP2A-204ENST00000597848 COL6A2P12110 1019 aa21.42■■□□□ 1.02
CHMP2A-204ENST00000597848 H2AFXP16104 143 aaPredicted RBP21.42■■□□□ 1.02
CHMP2A-204ENST00000597848 HSD17B2P37059 387 aa21.42■■□□□ 1.02
CHMP2A-204ENST00000597848 AP1S2P56377 157 aa21.42■■□□□ 1.02
CHMP2A-204ENST00000597848 TSTA3Q13630 321 aaPredicted RBP21.42■■□□□ 1.02
CHMP2A-204ENST00000597848 CASP8Q14790 479 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms