RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 POP4O95707 220 aaKnown RBP16.7■□□□□ 0.26
SHKBP1-205ENST00000594973 GUCA1CO95843 209 aa16.7■□□□□ 0.26
SHKBP1-205ENST00000594973 RCVRNP35243 200 aa16.7■□□□□ 0.26
SHKBP1-205ENST00000594973 OPRL1P41146 370 aa16.7■□□□□ 0.26
SHKBP1-205ENST00000594973 MAPRE2Q15555 327 aa16.7■□□□□ 0.26
SHKBP1-205ENST00000594973 ZNF77Q15935 545 aa16.7■□□□□ 0.26
SHKBP1-205ENST00000594973 TIGD2Q4W5G0 525 aa16.7■□□□□ 0.26
SHKBP1-205ENST00000594973 TXNDC11Q6PKC3 985 aa16.7■□□□□ 0.26
SHKBP1-205ENST00000594973 SCIMPQ6UWF3 145 aa16.7■□□□□ 0.26
SHKBP1-205ENST00000594973 VASH1Q7L8A9 365 aaPredicted RBP16.7■□□□□ 0.26
SHKBP1-205ENST00000594973 ADGRG2Q8IZP9 1017 aa16.7■□□□□ 0.26
SHKBP1-205ENST00000594973 PCDH20Q8N6Y1 951 aaKnown RBP16.7■□□□□ 0.26
SHKBP1-205ENST00000594973 ECHDC3Q96DC8 303 aa16.7■□□□□ 0.26
SHKBP1-205ENST00000594973 CDK15Q96Q40 435 aa16.7■□□□□ 0.26
SHKBP1-205ENST00000594973 CD84Q9UIB8 345 aa16.7■□□□□ 0.26
SHKBP1-205ENST00000594973 ZNF225Q9UK10 706 aa16.7■□□□□ 0.26
SHKBP1-205ENST00000594973 POU2F3Q9UKI9 436 aa16.7■□□□□ 0.26
SHKBP1-205ENST00000594973 CARD8Q9Y2G2 431 aa16.7■□□□□ 0.26
SHKBP1-205ENST00000594973 CLOCKO15516 846 aa16.7■□□□□ 0.26
SHKBP1-205ENST00000594973 XYLBO75191 536 aa16.7■□□□□ 0.26
SHKBP1-205ENST00000594973 TIPRLO75663 272 aa16.7■□□□□ 0.26
SHKBP1-205ENST00000594973 CEBPBP17676 345 aa16.7■□□□□ 0.26
SHKBP1-205ENST00000594973 GRIA3P42263 894 aa16.7■□□□□ 0.26
SHKBP1-205ENST00000594973 STX1BP61266 288 aa16.7■□□□□ 0.26
SHKBP1-205ENST00000594973 SAMD4BQ5PRF9 694 aaKnown RBP16.7■□□□□ 0.26
SHKBP1-205ENST00000594973 ZNF773Q6PK81 442 aa16.7■□□□□ 0.26
SHKBP1-205ENST00000594973 NXPE1Q8N323 547 aa16.7■□□□□ 0.26
SHKBP1-205ENST00000594973 LYSMD1Q96S90 227 aa16.7■□□□□ 0.26
SHKBP1-205ENST00000594973 BRD9Q9H8M2 597 aa16.7■□□□□ 0.26
SHKBP1-205ENST00000594973 TRBV5-4A0A0C4DH59 114 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 E2F3O00716 465 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 SEC24DO94855 1032 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 HGFP14210 728 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 RPS3P23396 243 aaKnown RBP eCLIP16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 HOXD11P31277 338 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 MLLT10P55197 1068 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 NEDD8Q15843 81 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 ATP13A5Q4VNC0 1218 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 CCNYL2Q5T2Q4 361 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 SBSNQ6UWP8 590 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 OR52B6Q8NGF0 335 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 OR2T34Q8NGX1 318 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 OR2T3Q8NH03 318 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 LILRB4Q8NHJ6 448 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 MAGED4Q96JG8 741 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 ACOX2Q99424 681 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 APOL5Q9BWW9 433 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 SPAG4Q9NPE6 437 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 CCM2LQ9NUG4 571 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 POLG2Q9UHN1 485 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 CENPBD1B2RD01 187 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 C9JVG2 144 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 KRT75O95678 551 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 SNRPB2P08579 225 aaKnown RBP16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 CAPGP40121 348 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 DMPKQ09013 629 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 LRP8Q14114 963 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 PRSS36Q5K4E3 855 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 REP15Q6BDI9 236 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 LAYNQ6UX15 382 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 NEK10Q6ZWH5 1172 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 ADAMTSL2Q86TH1 951 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 DHFR2Q86XF0 187 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 GOLM1Q8NBJ4 401 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 OR56A4Q8NGH8 313 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 OR2A12Q8NGT7 310 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 ZUFSPQ96AP4 578 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 C1QTNF3Q9BXJ4 246 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 CPEB1Q9BZB8 566 aaKnown RBP16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 CEP44Q9C0F1 390 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 MTG2Q9H4K7 406 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 AKIP1Q9NQ31 210 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 THG1LQ9NWX6 298 aaKnown RBP16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 CACNA2D2Q9NY47 1150 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 TBC1D14Q9P2M4 693 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 B4GALT6Q9UBX8 382 aa16.69■□□□□ 0.26
SHKBP1-205ENST00000594973 SAC3D1A6NKF1 404 aa16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 TTC34A8MYJ7 566 aa16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 SLC22A1O15245 554 aa16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 MLYCDO95822 493 aa16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 RECQLP46063 649 aaPredicted RBP16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 ATP6AP1Q15904 470 aa16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 GPR33Q49SQ1 333 aa16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 C6orf10Q5SRN2 563 aa16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 SPRED1Q7Z699 444 aa16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 CBARPQ8N350 705 aaPredicted RBP16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 PARP8Q8N3A8 854 aa16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 CDYL2Q8N8U2 506 aa16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 ST13P5Q8NFI4 369 aaPredicted RBP16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 HERVK_113Q902F9 699 aa16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 VMP1Q96GC9 406 aa16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 PDLIM5Q96HC4 596 aaKnown RBP16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 SLC45A3Q96JT2 553 aa16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 OSBPL10Q9BXB5 764 aa16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 NSUN3Q9H649 340 aaKnown RBP16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 NUDT4Q9NZJ9 180 aa16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 HELZP42694 1942 aaKnown RBP16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 REV3LO60673 3130 aa16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 PRORSD1PA6NEY8 169 aa16.68■□□□□ 0.26
SHKBP1-205ENST00000594973 GRXCR1A8MXD5 290 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms