RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 SPTBP11277 2137 aa18.2■□□□□ 0.5
CCDC43-205ENST00000592333 USP9XQ93008 2570 aaPredicted RBP18.19■□□□□ 0.5
CCDC43-205ENST00000592333 E7EVH7 732 aa18.19■□□□□ 0.5
CCDC43-205ENST00000592333 ZSCAN9O15535 394 aaPredicted RBP18.19■□□□□ 0.5
CCDC43-205ENST00000592333 GPC4O75487 556 aa18.19■□□□□ 0.5
CCDC43-205ENST00000592333 GOT2P00505 430 aaKnown RBP18.19■□□□□ 0.5
CCDC43-205ENST00000592333 TPBGLP0DKB5 382 aa18.19■□□□□ 0.5
CCDC43-205ENST00000592333 SOX8P57073 446 aa18.19■□□□□ 0.5
CCDC43-205ENST00000592333 KYNUQ16719 465 aa18.19■□□□□ 0.5
CCDC43-205ENST00000592333 FASTKD1Q53R41 847 aaKnown RBP18.19■□□□□ 0.5
CCDC43-205ENST00000592333 JMJD6Q6NYC1 403 aaPredicted RBP18.19■□□□□ 0.5
CCDC43-205ENST00000592333 UNC5DQ6UXZ4 953 aa18.19■□□□□ 0.5
CCDC43-205ENST00000592333 C4orf22Q6V702 233 aa18.19■□□□□ 0.5
CCDC43-205ENST00000592333 PPP1R21Q6ZMI0 780 aa18.19■□□□□ 0.5
CCDC43-205ENST00000592333 OR2Y1Q8NGV0 311 aa18.19■□□□□ 0.5
CCDC43-205ENST00000592333 PNPLA2Q96AD5 504 aa18.19■□□□□ 0.5
CCDC43-205ENST00000592333 PTERQ96BW5 349 aa18.19■□□□□ 0.5
CCDC43-205ENST00000592333 TSGA10Q9BZW7 698 aa18.19■□□□□ 0.5
CCDC43-205ENST00000592333 CASS4Q9NQ75 786 aa18.19■□□□□ 0.5
CCDC43-205ENST00000592333 ANAPC5Q9UJX4 755 aa18.19■□□□□ 0.5
CCDC43-205ENST00000592333 TDRKHQ9Y2W6 561 aaKnown RBP18.19■□□□□ 0.5
CCDC43-205ENST00000592333 MED13Q9UHV7 2174 aa18.18■□□□□ 0.5
CCDC43-205ENST00000592333 TCRBV7S2A1N4TA0A589 114 aa18.18■□□□□ 0.5
CCDC43-205ENST00000592333 KPNA5O15131 536 aa18.18■□□□□ 0.5
CCDC43-205ENST00000592333 IPO13O94829 963 aaKnown RBP18.18■□□□□ 0.5
CCDC43-205ENST00000592333 ONECUT2O95948 504 aa18.18■□□□□ 0.5
CCDC43-205ENST00000592333 S1PR4O95977 384 aa18.18■□□□□ 0.5
CCDC43-205ENST00000592333 APOA4P06727 396 aa18.18■□□□□ 0.5
CCDC43-205ENST00000592333 CDC25BP30305 580 aa18.18■□□□□ 0.5
CCDC43-205ENST00000592333 ARSFP54793 590 aa18.18■□□□□ 0.5
CCDC43-205ENST00000592333 PRAMEP78395 509 aa18.18■□□□□ 0.5
CCDC43-205ENST00000592333 ZIC1Q15915 447 aa18.18■□□□□ 0.5
CCDC43-205ENST00000592333 NADK2Q4G0N4 442 aa18.18■□□□□ 0.5
CCDC43-205ENST00000592333 CCDC38Q502W7 563 aa18.18■□□□□ 0.5
CCDC43-205ENST00000592333 VWA5B1Q5TIE3 1220 aa18.18■□□□□ 0.5
CCDC43-205ENST00000592333 MRPL14Q6P1L8 145 aaKnown RBP18.18■□□□□ 0.5
CCDC43-205ENST00000592333 DLG3Q92796 817 aa18.18■□□□□ 0.5
CCDC43-205ENST00000592333 NRTNQ99748 197 aa18.18■□□□□ 0.5
CCDC43-205ENST00000592333 NDC1Q9BTX1 674 aa18.18■□□□□ 0.5
CCDC43-205ENST00000592333 NUDT9Q9BW91 350 aa18.18■□□□□ 0.5
CCDC43-205ENST00000592333 RAB11FIP5Q9BXF6 653 aa18.18■□□□□ 0.5
CCDC43-205ENST00000592333 KLHL25Q9H0H3 589 aa18.18■□□□□ 0.5
CCDC43-205ENST00000592333 TXLNGQ9NUQ3 528 aa18.18■□□□□ 0.5
CCDC43-205ENST00000592333 INTS7Q9NVH2 962 aaKnown RBP18.18■□□□□ 0.5
CCDC43-205ENST00000592333 CUEDC1Q9NWM3 386 aaPredicted RBP18.18■□□□□ 0.5
CCDC43-205ENST00000592333 PIH1D1Q9NWS0 290 aaKnown RBP18.18■□□□□ 0.5
CCDC43-205ENST00000592333 SPHK1Q9NYA1 384 aa18.18■□□□□ 0.5
CCDC43-205ENST00000592333 PAK5Q9P286 719 aa18.18■□□□□ 0.5
CCDC43-205ENST00000592333 NDOR1Q9UHB4 597 aa18.18■□□□□ 0.5
CCDC43-205ENST00000592333 ZNF148Q9UQR1 794 aa18.18■□□□□ 0.5
CCDC43-205ENST00000592333 RP1L1Q8IWN7 2480 aaPredicted RBP18.17■□□□□ 0.5
CCDC43-205ENST00000592333 OR51F1A6NGY5 319 aa18.17■□□□□ 0.5
CCDC43-205ENST00000592333 ISM1B1AKI9 464 aa18.17■□□□□ 0.5
CCDC43-205ENST00000592333 PEX12O00623 359 aa18.17■□□□□ 0.5
CCDC43-205ENST00000592333 ZNF185O15231 689 aa18.17■□□□□ 0.5
CCDC43-205ENST00000592333 OR1I1O60431 355 aa18.17■□□□□ 0.5
CCDC43-205ENST00000592333 SLCO2B1O94956 709 aa18.17■□□□□ 0.5
CCDC43-205ENST00000592333 ALPPP05187 535 aa18.17■□□□□ 0.5
CCDC43-205ENST00000592333 CBSLP0DN79 551 aa18.17■□□□□ 0.5
CCDC43-205ENST00000592333 PIM1P11309 404 aaPredicted RBP18.17■□□□□ 0.5
CCDC43-205ENST00000592333 PKLRP30613 574 aa18.17■□□□□ 0.5
CCDC43-205ENST00000592333 CCR7P32248 378 aa18.17■□□□□ 0.5
CCDC43-205ENST00000592333 CBSP35520 551 aa18.17■□□□□ 0.5
CCDC43-205ENST00000592333 FOLR3P41439 243 aa18.17■□□□□ 0.5
CCDC43-205ENST00000592333 TTPAP49638 278 aa18.17■□□□□ 0.5
CCDC43-205ENST00000592333 ATP1A4Q13733 1029 aa18.17■□□□□ 0.5
CCDC43-205ENST00000592333 BRD3Q15059 726 aa18.17■□□□□ 0.5
CCDC43-205ENST00000592333 FHL5Q5TD97 284 aa18.17■□□□□ 0.5
CCDC43-205ENST00000592333 YOD1Q5VVQ6 348 aaPredicted RBP18.17■□□□□ 0.5
CCDC43-205ENST00000592333 DRICH1Q6PGQ1 229 aaPredicted RBP18.17■□□□□ 0.5
CCDC43-205ENST00000592333 IGFL3Q6UXB1 125 aa18.17■□□□□ 0.5
CCDC43-205ENST00000592333 ZNF534Q76KX8 674 aa18.17■□□□□ 0.5
CCDC43-205ENST00000592333 MRGPREQ86SM8 312 aa18.17■□□□□ 0.5
CCDC43-205ENST00000592333 LRRC6Q86X45 466 aa18.17■□□□□ 0.5
CCDC43-205ENST00000592333 SLC13A5Q86YT5 568 aaPredicted RBP18.17■□□□□ 0.5
CCDC43-205ENST00000592333 DCUN1D3Q8IWE4 304 aa18.17■□□□□ 0.5
CCDC43-205ENST00000592333 MPP5Q8N3R9 675 aa18.17■□□□□ 0.5
CCDC43-205ENST00000592333 CLEC1AQ8NC01 280 aa18.17■□□□□ 0.5
CCDC43-205ENST00000592333 OR6P1Q8NGX9 317 aa18.17■□□□□ 0.5
CCDC43-205ENST00000592333 SLC29A3Q9BZD2 475 aa18.17■□□□□ 0.5
CCDC43-205ENST00000592333 SLAMF7Q9NQ25 335 aa18.17■□□□□ 0.5
CCDC43-205ENST00000592333 EIF2B3Q9NR50 452 aaKnown RBP18.17■□□□□ 0.5
CCDC43-205ENST00000592333 IFT80Q9P2H3 777 aaPredicted RBP18.17■□□□□ 0.5
CCDC43-205ENST00000592333 CDYLQ9Y232 598 aa18.17■□□□□ 0.5
CCDC43-205ENST00000592333 TCAF1Q9Y4C2 921 aa18.17■□□□□ 0.5
CCDC43-205ENST00000592333 CAPN6Q9Y6Q1 641 aa18.17■□□□□ 0.5
CCDC43-205ENST00000592333 PRMT5O14744 637 aaPredicted RBP18.16■□□□□ 0.5
CCDC43-205ENST00000592333 KRT86O43790 486 aa18.16■□□□□ 0.5
CCDC43-205ENST00000592333 IFNB1P01574 187 aa18.16■□□□□ 0.5
CCDC43-205ENST00000592333 ALBP02768 609 aa18.16■□□□□ 0.5
CCDC43-205ENST00000592333 CD9P21926 228 aa18.16■□□□□ 0.5
CCDC43-205ENST00000592333 GCGRP47871 477 aa18.16■□□□□ 0.5
CCDC43-205ENST00000592333 INPP5JQ15735 1006 aaPredicted RBP18.16■□□□□ 0.5
CCDC43-205ENST00000592333 ZC3H12BQ5HYM0 836 aaKnown RBP18.16■□□□□ 0.5
CCDC43-205ENST00000592333 PCID2Q5JVF3 399 aa18.16■□□□□ 0.5
CCDC43-205ENST00000592333 DCAF10Q5QP82 559 aa18.16■□□□□ 0.5
CCDC43-205ENST00000592333 MLIPQ5VWP3 458 aa18.16■□□□□ 0.5
CCDC43-205ENST00000592333 ARMC3Q5W041 872 aa18.16■□□□□ 0.5
CCDC43-205ENST00000592333 CCDC89Q8N998 374 aa18.16■□□□□ 0.5
CCDC43-205ENST00000592333 PPHLN1Q8NEY8 458 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms