RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 CSHL1Q14406 222 aa16.59■□□□□ 0.25
RPRD1A-209ENST00000590898 TRIP6Q15654 476 aaKnown RBP16.59■□□□□ 0.25
RPRD1A-209ENST00000590898 DUS1LQ6P1R4 473 aaKnown RBP16.59■□□□□ 0.25
RPRD1A-209ENST00000590898 GUSBP11Q6P575 273 aa16.59■□□□□ 0.25
RPRD1A-209ENST00000590898 CDHR3Q6ZTQ4 885 aa16.59■□□□□ 0.25
RPRD1A-209ENST00000590898 UBE2R2Q712K3 238 aaPredicted RBP16.59■□□□□ 0.25
RPRD1A-209ENST00000590898 ALYREFQ86V81 257 aaKnown RBP16.59■□□□□ 0.25
RPRD1A-209ENST00000590898 TAX1BP1Q86VP1 789 aa16.59■□□□□ 0.25
RPRD1A-209ENST00000590898 SPNS2Q8IVW8 549 aa16.59■□□□□ 0.25
RPRD1A-209ENST00000590898 CENPLQ8N0S6 344 aaPredicted RBP16.59■□□□□ 0.25
RPRD1A-209ENST00000590898 FAM107BQ9H098 131 aa16.59■□□□□ 0.25
RPRD1A-209ENST00000590898 EPN3Q9H201 632 aa16.59■□□□□ 0.25
RPRD1A-209ENST00000590898 EPB41L1Q9H4G0 881 aa16.59■□□□□ 0.25
RPRD1A-209ENST00000590898 SLC17A7Q9P2U7 560 aa16.59■□□□□ 0.25
RPRD1A-209ENST00000590898 PCDHGA1Q9Y5H4 931 aa16.59■□□□□ 0.25
RPRD1A-209ENST00000590898 PRAMEF33A0A0G2JMD5 474 aa16.58■□□□□ 0.25
RPRD1A-209ENST00000590898 ENO2P09104 434 aaPredicted RBP16.58■□□□□ 0.25
RPRD1A-209ENST00000590898 MYF5P13349 255 aa16.58■□□□□ 0.25
RPRD1A-209ENST00000590898 CEACAM1P13688 526 aa16.58■□□□□ 0.25
RPRD1A-209ENST00000590898 CYP2A7P20853 494 aa16.58■□□□□ 0.25
RPRD1A-209ENST00000590898 GMPRP36959 345 aa16.58■□□□□ 0.25
RPRD1A-209ENST00000590898 EFL1Q7Z2Z2 1120 aaKnown RBP16.58■□□□□ 0.25
RPRD1A-209ENST00000590898 ADAMTSL2Q86TH1 951 aa16.58■□□□□ 0.25
RPRD1A-209ENST00000590898 IFI44Q8TCB0 444 aa16.58■□□□□ 0.25
RPRD1A-209ENST00000590898 BCAS4Q8TDM0 211 aa16.58■□□□□ 0.25
RPRD1A-209ENST00000590898 TCP10LQ8TDR4 215 aa16.58■□□□□ 0.25
RPRD1A-209ENST00000590898 DLG3Q92796 817 aa16.58■□□□□ 0.25
RPRD1A-209ENST00000590898 KIAA1191Q96A73 305 aa16.58■□□□□ 0.25
RPRD1A-209ENST00000590898 PAIP2Q9BPZ3 127 aaKnown RBP16.58■□□□□ 0.25
RPRD1A-209ENST00000590898 TRIM54Q9BYV2 358 aa16.58■□□□□ 0.25
RPRD1A-209ENST00000590898 VPS11Q9H270 941 aa16.58■□□□□ 0.25
RPRD1A-209ENST00000590898 NKIRAS1Q9NYS0 192 aa16.58■□□□□ 0.25
RPRD1A-209ENST00000590898 RUVBL2Q9Y230 463 aaKnown RBP16.58■□□□□ 0.25
RPRD1A-209ENST00000590898 FAM221BA6H8Z2 402 aa16.58■□□□□ 0.24
RPRD1A-209ENST00000590898 ARHGEF33A8MVX0 844 aa16.58■□□□□ 0.24
RPRD1A-209ENST00000590898 CDK4P11802 303 aa16.58■□□□□ 0.24
RPRD1A-209ENST00000590898 GPLD1P80108 840 aa16.58■□□□□ 0.24
RPRD1A-209ENST00000590898 SLC18A2Q05940 514 aa16.58■□□□□ 0.24
RPRD1A-209ENST00000590898 PRKG2Q13237 762 aa16.58■□□□□ 0.24
RPRD1A-209ENST00000590898 SQSTM1Q13501 440 aa16.58■□□□□ 0.24
RPRD1A-209ENST00000590898 ACAP2Q15057 778 aa16.58■□□□□ 0.24
RPRD1A-209ENST00000590898 TSNAXIP1Q2TAA8 658 aa16.58■□□□□ 0.24
RPRD1A-209ENST00000590898 TUBB8Q3ZCM7 444 aa16.58■□□□□ 0.24
RPRD1A-209ENST00000590898 SBSNQ6UWP8 590 aa16.58■□□□□ 0.24
RPRD1A-209ENST00000590898 ZNF771Q7L3S4 317 aaPredicted RBP16.58■□□□□ 0.24
RPRD1A-209ENST00000590898 CLEC14AQ86T13 490 aa16.58■□□□□ 0.24
RPRD1A-209ENST00000590898 ISCA2Q86U28 154 aa16.58■□□□□ 0.24
RPRD1A-209ENST00000590898 OR52E1Q8NGJ3 308 aa16.58■□□□□ 0.24
RPRD1A-209ENST00000590898 OR9A1PQ8NGU1 263 aa16.58■□□□□ 0.24
RPRD1A-209ENST00000590898 RHEBL1Q8TAI7 183 aa16.58■□□□□ 0.24
RPRD1A-209ENST00000590898 DYDC1Q8WWB3 177 aa16.58■□□□□ 0.24
RPRD1A-209ENST00000590898 CCDC74AQ96AQ1 378 aa16.58■□□□□ 0.24
RPRD1A-209ENST00000590898 NXNL1Q96CM4 212 aa16.58■□□□□ 0.24
RPRD1A-209ENST00000590898 RTKNQ9BST9 563 aa16.58■□□□□ 0.24
RPRD1A-209ENST00000590898 RDH14Q9HBH5 336 aa16.58■□□□□ 0.24
RPRD1A-209ENST00000590898 IGSF5Q9NSI5 407 aa16.58■□□□□ 0.24
RPRD1A-209ENST00000590898 PCMTD2Q9NV79 361 aa16.58■□□□□ 0.24
RPRD1A-209ENST00000590898 TSR3Q9UJK0 312 aaKnown RBP16.58■□□□□ 0.24
RPRD1A-209ENST00000590898 SPEGQ15772 3267 aa16.58■□□□□ 0.24
RPRD1A-209ENST00000590898 MYO1CO00159 1063 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 BTN3A1O00481 513 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 HIST1H2AGP0C0S8 130 aaPredicted RBP16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 HIST1H2ADP20671 130 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 HSD17B2P37059 387 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 ACADVLP49748 655 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 AP1S2P56377 157 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 DLG1Q12959 904 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 GRB7Q14451 532 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 KLC3Q6P597 504 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 KLHL35Q6PF15 583 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 FOXR1Q6PIV2 292 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 DEFB124Q8NES8 71 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 STAG3L4Q8TBR4 150 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 APOPT1Q96IL0 206 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 HIST1H2AHQ96KK5 128 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 GPR78Q96P69 363 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 HIST1H2AJQ99878 128 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 H2AFJQ9BTM1 129 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 HGH1Q9BTY7 390 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 RAB11FIP5Q9BXF6 653 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 SSU72Q9NP77 194 aaKnown RBP16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 DCDC2Q9UHG0 476 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 LNPEPQ9UIQ6 1025 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 ADAMTS6Q9UKP5 1117 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 PDE10AQ9Y233 779 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 TDRKHQ9Y2W6 561 aaKnown RBP16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 CDC7O00311 574 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 B4GAT1O43505 415 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 GSTA1P08263 222 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 IRF9Q00978 393 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 E2F1Q01094 437 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 ARHGAP19Q14CB8 494 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 PLCL1Q15111 1095 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 CLPPQ16740 277 aaPredicted RBP16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 RSPO4Q2I0M5 234 aaPredicted RBP16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 PERM1Q5SV97 790 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 SPRED1Q7Z699 444 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 SPATA6LQ8N4H0 392 aa16.57■□□□□ 0.24
RPRD1A-209ENST00000590898 RAB42Q8N4Z0 105 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms