RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 SLC5A2P31639 672 aa20.87■□□□□ 0.93
R3HDM4-206ENST00000590454 LIMK2P53671 638 aa20.87■□□□□ 0.93
R3HDM4-206ENST00000590454 PRKG2Q13237 762 aa20.87■□□□□ 0.93
R3HDM4-206ENST00000590454 EIF3IQ13347 325 aaKnown RBP20.87■□□□□ 0.93
R3HDM4-206ENST00000590454 NAB1Q13506 487 aa20.87■□□□□ 0.93
R3HDM4-206ENST00000590454 UAP1Q16222 522 aaPredicted RBP20.87■□□□□ 0.93
R3HDM4-206ENST00000590454 KLHL38Q2WGJ6 581 aa20.87■□□□□ 0.93
R3HDM4-206ENST00000590454 AMZ1Q400G9 498 aa20.87■□□□□ 0.93
R3HDM4-206ENST00000590454 GRTP1Q5TC63 336 aa20.87■□□□□ 0.93
R3HDM4-206ENST00000590454 FAM45BPQ6NSW5 357 aa20.87■□□□□ 0.93
R3HDM4-206ENST00000590454 TMEM207Q6UWW9 146 aa20.87■□□□□ 0.93
R3HDM4-206ENST00000590454 TMPRSS9Q7Z410 1059 aa20.87■□□□□ 0.93
R3HDM4-206ENST00000590454 FBXO39Q8N4B4 442 aa20.87■□□□□ 0.93
R3HDM4-206ENST00000590454 FAM45AQ8TCE6 357 aa20.87■□□□□ 0.93
R3HDM4-206ENST00000590454 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.87■□□□□ 0.932e-8■■■■■ 72.2
R3HDM4-206ENST00000590454 SYNDIG1Q9H7V2 258 aa20.87■□□□□ 0.93
R3HDM4-206ENST00000590454 KCNK4Q9NYG8 393 aa20.87■□□□□ 0.93
R3HDM4-206ENST00000590454 CIDEBQ9UHD4 219 aa20.87■□□□□ 0.93
R3HDM4-206ENST00000590454 TRMT6Q9UJA5 497 aaKnown RBP20.87■□□□□ 0.93
R3HDM4-206ENST00000590454 RAB21Q9UL25 225 aa20.87■□□□□ 0.93
R3HDM4-206ENST00000590454 SLC39A10Q9ULF5 831 aa20.87■□□□□ 0.93
R3HDM4-206ENST00000590454 ASF1AQ9Y294 204 aa20.87■□□□□ 0.93
R3HDM4-206ENST00000590454 SPTA1P02549 2419 aa20.87■□□□□ 0.93
R3HDM4-206ENST00000590454 IGHV1OR21-1A0A087WYE8 117 aa20.86■□□□□ 0.93
R3HDM4-206ENST00000590454 HMX2A2RU54 273 aa20.86■□□□□ 0.93
R3HDM4-206ENST00000590454 KRT87PA6NCN2 255 aa20.86■□□□□ 0.93
R3HDM4-206ENST00000590454 SUV39H1O43463 412 aa20.86■□□□□ 0.93
R3HDM4-206ENST00000590454 ABHD2P08910 425 aa20.86■□□□□ 0.93
R3HDM4-206ENST00000590454 CD1CP29017 333 aa20.86■□□□□ 0.93
R3HDM4-206ENST00000590454 GMPRP36959 345 aa20.86■□□□□ 0.93
R3HDM4-206ENST00000590454 BMPR2Q13873 1038 aa20.86■□□□□ 0.93
R3HDM4-206ENST00000590454 CYHR1Q6ZMK1 362 aa20.86■□□□□ 0.93
R3HDM4-206ENST00000590454 ZNF574Q6ZN55 896 aaPredicted RBP20.86■□□□□ 0.93
R3HDM4-206ENST00000590454 PIWIL4Q7Z3Z4 852 aaKnown RBP20.86■□□□□ 0.93
R3HDM4-206ENST00000590454 LURAP1LQ8IV03 231 aa20.86■□□□□ 0.93
R3HDM4-206ENST00000590454 EEF1AKMT1Q8WVE0 214 aa20.86■□□□□ 0.93
R3HDM4-206ENST00000590454 SKA2Q8WVK7 121 aaPredicted RBP20.86■□□□□ 0.93
R3HDM4-206ENST00000590454 EXTL1Q92935 676 aa20.86■□□□□ 0.93
R3HDM4-206ENST00000590454 GPR22Q99680 433 aa20.86■□□□□ 0.93
R3HDM4-206ENST00000590454 HGH1Q9BTY7 390 aa20.86■□□□□ 0.93
R3HDM4-206ENST00000590454 LRRN3Q9H3W5 708 aa20.86■□□□□ 0.93
R3HDM4-206ENST00000590454 STN1Q9H668 368 aaKnown RBP20.86■□□□□ 0.93
R3HDM4-206ENST00000590454 OGFRQ9NZT2 677 aa20.86■□□□□ 0.93
R3HDM4-206ENST00000590454 KLHL42Q9P2K6 505 aa20.86■□□□□ 0.93
R3HDM4-206ENST00000590454 SLC24A2Q9UI40 661 aa20.86■□□□□ 0.93
R3HDM4-206ENST00000590454 UNC13CQ8NB66 2214 aa20.85■□□□□ 0.93
R3HDM4-206ENST00000590454 POC1B-GALNT4F8VUJ3 575 aa20.85■□□□□ 0.93
R3HDM4-206ENST00000590454 TMX2-CTNND1H3BSU7 103 aa20.85■□□□□ 0.93
R3HDM4-206ENST00000590454 NTN3O00634 580 aaPredicted RBP20.85■□□□□ 0.93
R3HDM4-206ENST00000590454 CD9P21926 228 aa20.85■□□□□ 0.93
R3HDM4-206ENST00000590454 GCAP28676 217 aa20.85■□□□□ 0.93
R3HDM4-206ENST00000590454 ATP5DP30049 168 aa20.85■□□□□ 0.93
R3HDM4-206ENST00000590454 MAPK9P45984 424 aa20.85■□□□□ 0.93
R3HDM4-206ENST00000590454 GPR3P46089 330 aa20.85■□□□□ 0.93
R3HDM4-206ENST00000590454 BDKRB1P46663 353 aa20.85■□□□□ 0.93
R3HDM4-206ENST00000590454 NFKB2Q00653 900 aa20.85■□□□□ 0.93
R3HDM4-206ENST00000590454 KRT33BQ14525 404 aa20.85■□□□□ 0.93
R3HDM4-206ENST00000590454 CCSMST1Q4G0I0 132 aa20.85■□□□□ 0.93
R3HDM4-206ENST00000590454 UBLCP1Q8WVY7 318 aaPredicted RBP20.85■□□□□ 0.93
R3HDM4-206ENST00000590454 SLC44A1Q8WWI5 657 aa20.85■□□□□ 0.93
R3HDM4-206ENST00000590454 PAFAH2Q99487 392 aa20.85■□□□□ 0.93
R3HDM4-206ENST00000590454 KIR3DX1Q9H7L2 352 aa20.85■□□□□ 0.93
R3HDM4-206ENST00000590454 UCK1Q9HA47 277 aa20.85■□□□□ 0.93
R3HDM4-206ENST00000590454 ACSL6Q9UKU0 697 aa20.85■□□□□ 0.93
R3HDM4-206ENST00000590454 PLAGL1Q9UM63 463 aa20.85■□□□□ 0.93
R3HDM4-206ENST00000590454 HEBP2Q9Y5Z4 205 aa20.85■□□□□ 0.93
R3HDM4-206ENST00000590454 LILRA5A6NI73 299 aa20.84■□□□□ 0.93
R3HDM4-206ENST00000590454 PHGDHO43175 533 aaKnown RBP20.84■□□□□ 0.93
R3HDM4-206ENST00000590454 MATN4O95460 622 aa20.84■□□□□ 0.93
R3HDM4-206ENST00000590454 TSPAN12O95859 305 aa20.84■□□□□ 0.93
R3HDM4-206ENST00000590454 SHBGP04278 402 aa20.84■□□□□ 0.93
R3HDM4-206ENST00000590454 TYRP1P17643 537 aa20.84■□□□□ 0.93
R3HDM4-206ENST00000590454 CSF2RBP32927 897 aa20.84■□□□□ 0.93
R3HDM4-206ENST00000590454 SPRP35270 261 aaPredicted RBP20.84■□□□□ 0.93
R3HDM4-206ENST00000590454 SKIV2L2P42285 1042 aaKnown RBP20.84■□□□□ 0.93
R3HDM4-206ENST00000590454 PDAP1Q13442 181 aaKnown RBP20.84■□□□□ 0.93
R3HDM4-206ENST00000590454 TTLL9Q3SXZ7 439 aa20.84■□□□□ 0.93
R3HDM4-206ENST00000590454 RAB11FIP2Q7L804 512 aa20.84■□□□□ 0.93
R3HDM4-206ENST00000590454 LMNTD1Q8N9Z9 388 aa20.84■□□□□ 0.93
R3HDM4-206ENST00000590454 AVL9Q8NBF6 648 aa20.84■□□□□ 0.93
R3HDM4-206ENST00000590454 OR52E1Q8NGJ3 308 aa20.84■□□□□ 0.93
R3HDM4-206ENST00000590454 DCAKDQ8WVC6 231 aa20.84■□□□□ 0.93
R3HDM4-206ENST00000590454 SH3KBP1Q96B97 665 aa20.84■□□□□ 0.93
R3HDM4-206ENST00000590454 NUDT22Q9BRQ3 303 aa20.84■□□□□ 0.93
R3HDM4-206ENST00000590454 STRADBQ9C0K7 418 aa20.84■□□□□ 0.93
R3HDM4-206ENST00000590454 XKR8Q9H6D3 395 aa20.84■□□□□ 0.93
R3HDM4-206ENST00000590454 MVB12BQ9H7P6 319 aa20.84■□□□□ 0.93
R3HDM4-206ENST00000590454 RDH14Q9HBH5 336 aa20.84■□□□□ 0.93
R3HDM4-206ENST00000590454 TMEM9Q9P0T7 183 aa20.84■□□□□ 0.93
R3HDM4-206ENST00000590454 IKZF3Q9UKT9 509 aa20.84■□□□□ 0.93
R3HDM4-206ENST00000590454 TDRKHQ9Y2W6 561 aaKnown RBP20.84■□□□□ 0.93
R3HDM4-206ENST00000590454 COLEC10Q9Y6Z7 277 aa20.84■□□□□ 0.93
R3HDM4-206ENST00000590454 WISP3O95389 354 aaPredicted RBP20.83■□□□□ 0.93
R3HDM4-206ENST00000590454 C1orf105O95561 183 aa20.83■□□□□ 0.93
R3HDM4-206ENST00000590454 HSD17B3P37058 310 aa20.83■□□□□ 0.93
R3HDM4-206ENST00000590454 POU4F1Q01851 419 aa20.83■□□□□ 0.93
R3HDM4-206ENST00000590454 GRB7Q14451 532 aa20.83■□□□□ 0.93
R3HDM4-206ENST00000590454 USP10Q14694 798 aaKnown RBP20.83■□□□□ 0.93
R3HDM4-206ENST00000590454 TGIF1Q15583 401 aa20.83■□□□□ 0.93
R3HDM4-206ENST00000590454 MROH9Q5TGP6 573 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms