RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 UMPSP11172 480 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 HLA-EP13747 358 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 HOXB6P17509 224 aaKnown RBP10.13□□□□□ -0.79
VPS25-203ENST00000589520 CAPN3P20807 821 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 HSD17B2P37059 387 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 CASP2P42575 452 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 DPP6P42658 865 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 IL12RB1P42701 662 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 GDF5P43026 501 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 UFM1P61960 85 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 MS4A2Q01362 244 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 HYAL1Q12794 435 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 NFYCQ13952 458 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 INPP5AQ14642 412 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 TLR1Q15399 786 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 C18orf21Q32NC0 220 aaPredicted RBP10.13□□□□□ -0.79
VPS25-203ENST00000589520 RAET1GQ6H3X3 334 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 SDE2Q6IQ49 451 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 MSANTD1Q6ZTZ1 278 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 DHFR2Q86XF0 187 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 HID1Q8IV36 788 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 MMAAQ8IVH4 418 aaKnown RBP10.13□□□□□ -0.79
VPS25-203ENST00000589520 SLC15A3Q8IY34 581 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 PQLC1Q8N2U9 271 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 PHC3Q8NDX5 983 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 BHLHE22Q8NFJ8 381 aaPredicted RBP10.13□□□□□ -0.79
VPS25-203ENST00000589520 TNIP2Q8NFZ5 429 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 HM13Q8TCT9 377 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 SETD7Q8WTS6 366 aaKnown RBP10.13□□□□□ -0.79
VPS25-203ENST00000589520 NRG4Q8WWG1 115 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 SELENOMQ8WWX9 145 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 PYDC1Q8WXC3 89 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 MYLIPQ8WY64 445 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 STARD8Q92502 1023 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 REPS1Q96D71 796 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 HIC2Q96JB3 615 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 P2RY13Q9BPV8 354 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 WRAP53Q9BUR4 548 aaKnown RBP10.13□□□□□ -0.79
VPS25-203ENST00000589520 DPY30Q9C005 99 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 RSPH9Q9H1X1 276 aaPredicted RBP10.13□□□□□ -0.79
VPS25-203ENST00000589520 VCXQ9H320 206 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 ITM2CQ9NQX7 267 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 CNOT11Q9UKZ1 510 aaKnown RBP10.13□□□□□ -0.79
VPS25-203ENST00000589520 RNF11Q9Y3C5 154 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 PTGDR2Q9Y5Y4 395 aa10.13□□□□□ -0.79
VPS25-203ENST00000589520 KCNE1BA0A087WTH5 132 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 TCRBV3S1A0A5B6 114 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 PRORSD1PA6NEY8 169 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 MGAT4DA6NG13 374 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 H0YIV9 168 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 H0YJX3 145 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 H3BNX3 289 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 ANKRD28O15084 1053 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 SPINT1O43278 529 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 MMP20O60882 483 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 SEC22BO75396 215 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 MTX2O75431 263 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 CAPNS1P04632 268 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 RPN2P04844 631 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 G6PDP11413 515 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 BMP1P13497 986 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 CD1EP15812 388 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 SLC6A2P23975 617 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 SLC7A1P30825 629 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 GDI1P31150 447 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 HSPA13P48723 471 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 CLCN2P51788 898 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 SLC7A2P52569 658 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 CTSCP53634 463 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 IRF8Q02556 426 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 ABRQ12979 859 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 CSTF3Q12996 717 aaKnown RBP10.12□□□□□ -0.79
VPS25-203ENST00000589520 CAMK2GQ13555 558 aaPredicted RBP10.12□□□□□ -0.79
VPS25-203ENST00000589520 PWP1Q13610 501 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 E2F2Q14209 437 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 RFTN2Q52LD8 501 aaPredicted RBP10.12□□□□□ -0.79
VPS25-203ENST00000589520 FRG2Q64ET8 278 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 CAPN13Q6MZZ7 669 aaPredicted RBP10.12□□□□□ -0.79
VPS25-203ENST00000589520 IRGCQ6NXR0 463 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 AGTRAPQ6RW13 159 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 UNC5DQ6UXZ4 953 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 LPCAT2Q7L5N7 544 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 TRMT11Q7Z4G4 463 aaKnown RBP10.12□□□□□ -0.79
VPS25-203ENST00000589520 RETREG3Q86VR2 466 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 THOC6Q86W42 341 aaKnown RBP10.12□□□□□ -0.79
VPS25-203ENST00000589520 SPATA24Q86W54 205 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 PROSER1Q86XN7 944 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 PTRH1Q86Y79 214 aaKnown RBP10.12□□□□□ -0.79
VPS25-203ENST00000589520 VRK3Q8IV63 474 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 RGL4Q8IZJ4 473 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 ZNF366Q8N895 744 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 OR8J3Q8NGG0 315 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 OR2L2Q8NH16 312 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 OR56A3Q8NH54 315 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 CSGALNACT1Q8TDX6 532 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 COX14Q96I36 57 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 BTBD9Q96Q07 612 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 FRG2BQ96QU4 278 aa10.12□□□□□ -0.79
VPS25-203ENST00000589520 NR1H4Q96RI1 486 aaPredicted RBP10.12□□□□□ -0.79
VPS25-203ENST00000589520 S1PR5Q9H228 398 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms