RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 BIRC7Q96CA5 298 aa7.25□□□□□ -1.25
ZNF540-206ENST00000589117 SCLYQ96I15 445 aa7.25□□□□□ -1.25
ZNF540-206ENST00000589117 TEX37Q96LM6 180 aa7.25□□□□□ -1.25
ZNF540-206ENST00000589117 FERD3LQ96RJ6 166 aa7.25□□□□□ -1.25
ZNF540-206ENST00000589117 CGREF1Q99674 301 aa7.25□□□□□ -1.25
ZNF540-206ENST00000589117 C17orf80Q9BSJ5 609 aa7.25□□□□□ -1.25
ZNF540-206ENST00000589117 HERC2P3Q9BVR0 1158 aa7.25□□□□□ -1.25
ZNF540-206ENST00000589117 EMILIN2Q9BXX0 1053 aa7.25□□□□□ -1.25
ZNF540-206ENST00000589117 SLC29A3Q9BZD2 475 aa7.25□□□□□ -1.25
ZNF540-206ENST00000589117 NSUN3Q9H649 340 aaKnown RBP7.25□□□□□ -1.25
ZNF540-206ENST00000589117 ABCB8Q9NUT2 735 aa7.25□□□□□ -1.25
ZNF540-206ENST00000589117 OLAHQ9NV23 265 aa7.25□□□□□ -1.25
ZNF540-206ENST00000589117 TOR4AQ9NXH8 423 aa7.25□□□□□ -1.25
ZNF540-206ENST00000589117 RSL24D1Q9UHA3 163 aaKnown RBP7.25□□□□□ -1.25
ZNF540-206ENST00000589117 TRPS1Q9UHF7 1281 aa7.25□□□□□ -1.25
ZNF540-206ENST00000589117 RNF11Q9Y3C5 154 aa7.25□□□□□ -1.25
ZNF540-206ENST00000589117 INSL5Q9Y5Q6 135 aa7.25□□□□□ -1.25
ZNF540-206ENST00000589117 TRAV19A0A0A6YYK7 116 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 H0YAE9 185 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 OR7A17O14581 309 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 GDF9O60383 454 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 SEC22BO75396 215 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 OR6B1O95007 311 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 CLDN7O95471 211 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 CLDN9O95484 217 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 ALBP02768 609 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 ANXA6P08133 673 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 CNPP09543 421 aaKnown RBP7.24□□□□□ -1.25
ZNF540-206ENST00000589117 ETS2P15036 469 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 PFKLP17858 780 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 PPM1AP35813 382 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 HNMTP50135 292 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 EPS8Q12929 822 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 ARHGEF7Q14155 803 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 GK3PQ14409 553 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 ABRAXAS2Q15018 415 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 FXNQ16595 210 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 MYLK3Q32MK0 819 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 SLC36A3Q495N2 470 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 GPRC6AQ5T6X5 926 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 MRM1Q6IN84 353 aaKnown RBP7.24□□□□□ -1.25
ZNF540-206ENST00000589117 Q6ZNB5 142 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 TPRG1Q6ZUI0 275 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 TRIM46Q7Z4K8 759 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 GPR141Q7Z602 305 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 SPRED1Q7Z699 444 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 PATL1Q86TB9 770 aaKnown RBP7.24□□□□□ -1.25
ZNF540-206ENST00000589117 DDX53Q86TM3 631 aaKnown RBP7.24□□□□□ -1.25
ZNF540-206ENST00000589117 NXPE1Q8N323 547 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 ZNF786Q8N393 782 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 OR2AP1Q8NGE2 309 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 PNPT1Q8TCS8 783 aaKnown RBP7.24□□□□□ -1.25
ZNF540-206ENST00000589117 UBTD2Q8WUN7 234 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 SLC13A3Q8WWT9 602 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 ISG20Q96AZ6 181 aaKnown RBP7.24□□□□□ -1.25
ZNF540-206ENST00000589117 ALG14Q96F25 216 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 SCRN2Q96FV2 425 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 VPS50Q96JG6 964 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 SMIM14Q96QK8 99 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 LYSMD1Q96S90 227 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 COPS8Q99627 209 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 IER2Q9BTL4 223 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 THUMPD3Q9BV44 507 aaKnown RBP7.24□□□□□ -1.25
ZNF540-206ENST00000589117 CHID1Q9BWS9 393 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 RMND5AQ9H871 391 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 GORASP2Q9H8Y8 452 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 DUS2Q9NX74 493 aaKnown RBP7.24□□□□□ -1.25
ZNF540-206ENST00000589117 ZNF490Q9ULM2 529 aaPredicted RBP7.24□□□□□ -1.25
ZNF540-206ENST00000589117 SNX6Q9UNH7 406 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 ZNF701M0R085 212 aaPredicted RBP7.24□□□□□ -1.25
ZNF540-206ENST00000589117 FKTNO75072 461 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 TRMUO75648 421 aaKnown RBP7.24□□□□□ -1.25
ZNF540-206ENST00000589117 OLFM2O95897 454 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 LRG1P02750 347 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 C8GP07360 202 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 MTHFD1P11586 935 aaKnown RBP7.24□□□□□ -1.25
ZNF540-206ENST00000589117 BPIP17213 487 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 ITGB6P18564 788 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 CDH2P19022 906 aaPredicted RBP7.24□□□□□ -1.25
ZNF540-206ENST00000589117 ITPKAP23677 461 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 CAPGP40121 348 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 RPL38P63173 70 aaKnown RBP7.24□□□□□ -1.25
ZNF540-206ENST00000589117 TRAF3Q13114 568 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 CHRNA6Q15825 494 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 RFTN2Q52LD8 501 aaPredicted RBP7.24□□□□□ -1.25
ZNF540-206ENST00000589117 TXNDC8Q6A555 127 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 SLC2A7Q6PXP3 512 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 TPGS1Q6ZTW0 290 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 CCDC149Q6ZUS6 474 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 ANKRD33Q7Z3H0 272 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 ZDHHC13Q8IUH4 622 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 ERI1Q8IV48 349 aaKnown RBP7.24□□□□□ -1.25
ZNF540-206ENST00000589117 CLDN19Q8N6F1 224 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 METTL25Q8N6Q8 603 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 DCBLD1Q8N8Z6 715 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 OR2T12Q8NG77 320 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 MAGEE2Q8TD90 523 aaPredicted RBP7.24□□□□□ -1.25
ZNF540-206ENST00000589117 BHMTQ93088 406 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 RHBDF1Q96CC6 855 aa7.24□□□□□ -1.25
ZNF540-206ENST00000589117 PPM1MQ96MI6 270 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms