RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 PRPSAP1Q14558 356 aa17.74■□□□□ 0.43
CCDC43-204ENST00000588687 PACS1Q6VY07 963 aa17.74■□□□□ 0.43
CCDC43-204ENST00000588687 TBC1D21Q8IYX1 336 aa17.74■□□□□ 0.43
CCDC43-204ENST00000588687 ZNF655Q8N720 491 aaPredicted RBP17.74■□□□□ 0.43
CCDC43-204ENST00000588687 OR5K2Q8NHB8 316 aa17.74■□□□□ 0.43
CCDC43-204ENST00000588687 CDKN2AIPNLQ96HQ2 116 aa17.74■□□□□ 0.43
CCDC43-204ENST00000588687 AP1M1Q9BXS5 423 aa17.74■□□□□ 0.43
CCDC43-204ENST00000588687 OSBPL8Q9BZF1 889 aa17.74■□□□□ 0.43
CCDC43-204ENST00000588687 ILKAPQ9H0C8 392 aaPredicted RBP17.74■□□□□ 0.43
CCDC43-204ENST00000588687 IFT80Q9P2H3 777 aaPredicted RBP17.74■□□□□ 0.43
CCDC43-204ENST00000588687 ASF1AQ9Y294 204 aa17.74■□□□□ 0.43
CCDC43-204ENST00000588687 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.74■□□□□ 0.43
CCDC43-204ENST00000588687 PCDHA3Q9Y5H8 950 aa17.74■□□□□ 0.43
CCDC43-204ENST00000588687 AKR1B15C9JRZ8 316 aaPredicted RBP17.73■□□□□ 0.43
CCDC43-204ENST00000588687 IGHEP01854 428 aa17.73■□□□□ 0.43
CCDC43-204ENST00000588687 CACNG1Q06432 222 aa17.73■□□□□ 0.43
CCDC43-204ENST00000588687 SLC5A12Q1EHB4 618 aa17.73■□□□□ 0.43
CCDC43-204ENST00000588687 LYPLAL1Q5VWZ2 237 aa17.73■□□□□ 0.43
CCDC43-204ENST00000588687 AADACL2Q6P093 401 aa17.73■□□□□ 0.43
CCDC43-204ENST00000588687 TLDC1Q6P9B6 456 aa17.73■□□□□ 0.43
CCDC43-204ENST00000588687 IGFL2Q6UWQ7 119 aa17.73■□□□□ 0.43
CCDC43-204ENST00000588687 TC2NQ8N9U0 490 aa17.73■□□□□ 0.43
CCDC43-204ENST00000588687 ALG3Q92685 438 aa17.73■□□□□ 0.43
CCDC43-204ENST00000588687 PTERQ96BW5 349 aa17.73■□□□□ 0.43
CCDC43-204ENST00000588687 C5orf34Q96MH7 638 aa17.73■□□□□ 0.43
CCDC43-204ENST00000588687 PPP1R2P1Q96PQ5 205 aa17.73■□□□□ 0.43
CCDC43-204ENST00000588687 NDOR1Q9UHB4 597 aa17.73■□□□□ 0.43
CCDC43-204ENST00000588687 PLAGL1Q9UM63 463 aa17.73■□□□□ 0.43
CCDC43-204ENST00000588687 CNTRLQ7Z7A1 2325 aa17.73■□□□□ 0.43
CCDC43-204ENST00000588687 RCCD1A6NED2 376 aa17.72■□□□□ 0.43
CCDC43-204ENST00000588687 MROH6A6NGR9 719 aa17.72■□□□□ 0.43
CCDC43-204ENST00000588687 AGPSO00116 658 aa17.72■□□□□ 0.43
CCDC43-204ENST00000588687 PEX12O00623 359 aa17.72■□□□□ 0.43
CCDC43-204ENST00000588687 STK10O94804 968 aaKnown RBP17.72■□□□□ 0.43
CCDC43-204ENST00000588687 IPO13O94829 963 aaKnown RBP17.72■□□□□ 0.43
CCDC43-204ENST00000588687 METTL18O95568 372 aa17.72■□□□□ 0.43
CCDC43-204ENST00000588687 ONECUT2O95948 504 aa17.72■□□□□ 0.43
CCDC43-204ENST00000588687 PKLRP30613 574 aa17.72■□□□□ 0.43
CCDC43-204ENST00000588687 FOXN2P32314 431 aa17.72■□□□□ 0.43
CCDC43-204ENST00000588687 NSG1P42857 185 aa17.72■□□□□ 0.43
CCDC43-204ENST00000588687 ITIH4Q14624 930 aa17.72■□□□□ 0.43
CCDC43-204ENST00000588687 POU6F1Q14863 301 aa17.72■□□□□ 0.43
CCDC43-204ENST00000588687 CCDC181Q5TID7 509 aa17.72■□□□□ 0.43
CCDC43-204ENST00000588687 NAPRTQ6XQN6 538 aa17.72■□□□□ 0.43
CCDC43-204ENST00000588687 COX15Q7KZN9 410 aa17.72■□□□□ 0.43
CCDC43-204ENST00000588687 TAS2R42Q7RTR8 314 aa17.72■□□□□ 0.43
CCDC43-204ENST00000588687 FAM20CQ8IXL6 584 aa17.72■□□□□ 0.43
CCDC43-204ENST00000588687 LINC01555Q8NAE3 123 aa17.72■□□□□ 0.43
CCDC43-204ENST00000588687 N4BP2L2Q92802 583 aaPredicted RBP17.72■□□□□ 0.43
CCDC43-204ENST00000588687 SPSB2Q99619 263 aa17.72■□□□□ 0.43
CCDC43-204ENST00000588687 WDR77Q9BQA1 342 aaPredicted RBP17.72■□□□□ 0.43
CCDC43-204ENST00000588687 SLC6A20Q9NP91 592 aa17.72■□□□□ 0.43
CCDC43-204ENST00000588687 ENAMQ9NRM1 1142 aa17.72■□□□□ 0.43
CCDC43-204ENST00000588687 POLG2Q9UHN1 485 aa17.72■□□□□ 0.43
CCDC43-204ENST00000588687 GPN3Q9UHW5 284 aaPredicted RBP17.72■□□□□ 0.43
CCDC43-204ENST00000588687 NOVA2Q9UNW9 492 aaKnown RBP17.72■□□□□ 0.43
CCDC43-204ENST00000588687 PCDHA13Q9Y5I0 950 aa17.72■□□□□ 0.43
CCDC43-204ENST00000588687 COPG1Q9Y678 874 aaKnown RBP17.72■□□□□ 0.43
CCDC43-204ENST00000588687 AKAP9Q99996 3911 aa17.72■□□□□ 0.43
CCDC43-204ENST00000588687 OR51F1A6NGY5 319 aa17.71■□□□□ 0.43
CCDC43-204ENST00000588687 SOCS6O14544 535 aa17.71■□□□□ 0.43
CCDC43-204ENST00000588687 ALOX12BO75342 701 aa17.71■□□□□ 0.43
CCDC43-204ENST00000588687 AP2A1O95782 977 aa17.71■□□□□ 0.43
CCDC43-204ENST00000588687 CD63P08962 238 aa17.71■□□□□ 0.43
CCDC43-204ENST00000588687 TPH1P17752 444 aa17.71■□□□□ 0.43
CCDC43-204ENST00000588687 MAGP20916 626 aa17.71■□□□□ 0.43
CCDC43-204ENST00000588687 KIR2DS3Q14952 304 aa17.71■□□□□ 0.43
CCDC43-204ENST00000588687 ZNF449Q6P9G9 518 aa17.71■□□□□ 0.43
CCDC43-204ENST00000588687 DARS2Q6PI48 645 aaKnown RBP17.71■□□□□ 0.43
CCDC43-204ENST00000588687 ST6GALNAC3Q8NDV1 305 aa17.71■□□□□ 0.43
CCDC43-204ENST00000588687 PPP4R1Q8TF05 950 aa17.71■□□□□ 0.43
CCDC43-204ENST00000588687 STYXQ8WUJ0 223 aa17.71■□□□□ 0.43
CCDC43-204ENST00000588687 TM9SF4Q92544 642 aa17.71■□□□□ 0.43
CCDC43-204ENST00000588687 ELMO1Q92556 727 aa17.71■□□□□ 0.43
CCDC43-204ENST00000588687 FKBP10Q96AY3 582 aa17.71■□□□□ 0.43
CCDC43-204ENST00000588687 NACC2Q96BF6 587 aa17.71■□□□□ 0.43
CCDC43-204ENST00000588687 FERMT1Q9BQL6 677 aa17.71■□□□□ 0.43
CCDC43-204ENST00000588687 TXLNGQ9NUQ3 528 aa17.71■□□□□ 0.43
CCDC43-204ENST00000588687 PIH1D1Q9NWS0 290 aaKnown RBP17.71■□□□□ 0.43
CCDC43-204ENST00000588687 EURLQ9NYK6 297 aa17.71■□□□□ 0.43
CCDC43-204ENST00000588687 SMARCAL1Q9NZC9 954 aa17.71■□□□□ 0.43
CCDC43-204ENST00000588687 FBXL4Q9UKA2 621 aa17.71■□□□□ 0.43
CCDC43-204ENST00000588687 PLCL2Q9UPR0 1127 aa17.71■□□□□ 0.43
CCDC43-204ENST00000588687 CELSR1Q9NYQ6 3014 aa17.7■□□□□ 0.42
CCDC43-204ENST00000588687 ENO4A6NNW6 628 aa17.7■□□□□ 0.42
CCDC43-204ENST00000588687 KLHL41O60662 606 aa17.7■□□□□ 0.42
CCDC43-204ENST00000588687 FTH1P02794 183 aa17.7■□□□□ 0.42
CCDC43-204ENST00000588687 ATXN8OSP0DMR3 200 aa17.7■□□□□ 0.42
CCDC43-204ENST00000588687 MMP11P24347 488 aa17.7■□□□□ 0.42
CCDC43-204ENST00000588687 MSNP26038 577 aaKnown RBP17.7■□□□□ 0.42
CCDC43-204ENST00000588687 CTNNA2P26232 953 aa17.7■□□□□ 0.42
CCDC43-204ENST00000588687 AIMP2Q13155 320 aaKnown RBP17.7■□□□□ 0.42
CCDC43-204ENST00000588687 GRB7Q14451 532 aa17.7■□□□□ 0.42
CCDC43-204ENST00000588687 BRD3Q15059 726 aa17.7■□□□□ 0.42
CCDC43-204ENST00000588687 CYP2A13Q16696 494 aa17.7■□□□□ 0.42
CCDC43-204ENST00000588687 C1QL3Q5VWW1 255 aa17.7■□□□□ 0.42
CCDC43-204ENST00000588687 HOOK3Q86VS8 718 aa17.7■□□□□ 0.42
CCDC43-204ENST00000588687 ZADH2Q8N4Q0 377 aa17.7■□□□□ 0.42
CCDC43-204ENST00000588687 OR13J1Q8NGT2 312 aa17.7■□□□□ 0.42
CCDC43-204ENST00000588687 SLC26A1Q9H2B4 701 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms