RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 NKAIN1Q4KMZ8 207 aa13.55□□□□□ -0.24
DNMT1-213ENST00000587604 PPP1R32Q7Z5V6 425 aa13.55□□□□□ -0.24
DNMT1-213ENST00000587604 TMTC1Q8IUR5 882 aa13.55□□□□□ -0.24
DNMT1-213ENST00000587604 PIANPQ8IYJ0 282 aa13.55□□□□□ -0.24
DNMT1-213ENST00000587604 DNAJC22Q8N4W6 341 aa13.55□□□□□ -0.24
DNMT1-213ENST00000587604 ZNF655Q8N720 491 aaPredicted RBP13.55□□□□□ -0.24
DNMT1-213ENST00000587604 STYXQ8WUJ0 223 aa13.55□□□□□ -0.24
DNMT1-213ENST00000587604 INPP5DQ92835 1189 aa13.55□□□□□ -0.24
DNMT1-213ENST00000587604 NDC1Q9BTX1 674 aa13.55□□□□□ -0.24
DNMT1-213ENST00000587604 TXLNGQ9NUQ3 528 aa13.55□□□□□ -0.24
DNMT1-213ENST00000587604 SPHK1Q9NYA1 384 aa13.55□□□□□ -0.24
DNMT1-213ENST00000587604 SMARCAL1Q9NZC9 954 aa13.55□□□□□ -0.24
DNMT1-213ENST00000587604 DHCR7Q9UBM7 475 aaKnown RBP13.55□□□□□ -0.24
DNMT1-213ENST00000587604 CDYLQ9Y232 598 aa13.55□□□□□ -0.24
DNMT1-213ENST00000587604 PCDHA3Q9Y5H8 950 aa13.55□□□□□ -0.24
DNMT1-213ENST00000587604 PCDHA13Q9Y5I0 950 aa13.55□□□□□ -0.24
DNMT1-213ENST00000587604 AGPSO00116 658 aa13.54□□□□□ -0.24
DNMT1-213ENST00000587604 PJA2O43164 708 aa13.54□□□□□ -0.24
DNMT1-213ENST00000587604 ZNF189O75820 626 aaPredicted RBP13.54□□□□□ -0.24
DNMT1-213ENST00000587604 CTSBP07858 339 aa13.54□□□□□ -0.24
DNMT1-213ENST00000587604 UMODP07911 640 aa13.54□□□□□ -0.24
DNMT1-213ENST00000587604 TPBGLP0DKB5 382 aa13.54□□□□□ -0.24
DNMT1-213ENST00000587604 TPH1P17752 444 aa13.54□□□□□ -0.24
DNMT1-213ENST00000587604 PTPN7P35236 360 aa13.54□□□□□ -0.24
DNMT1-213ENST00000587604 PLOD1Q02809 727 aaPredicted RBP13.54□□□□□ -0.24
DNMT1-213ENST00000587604 AIMP2Q13155 320 aaKnown RBP13.54□□□□□ -0.24
DNMT1-213ENST00000587604 TBX2Q13207 712 aaPredicted RBP13.54□□□□□ -0.24
DNMT1-213ENST00000587604 DBN1Q16643 649 aa13.54□□□□□ -0.24
DNMT1-213ENST00000587604 SLC5A12Q1EHB4 618 aa13.54□□□□□ -0.24
DNMT1-213ENST00000587604 KCTD11Q693B1 232 aa13.54□□□□□ -0.24
DNMT1-213ENST00000587604 CUZD1Q86UP6 607 aa13.54□□□□□ -0.24
DNMT1-213ENST00000587604 TTC13Q8NBP0 860 aa13.54□□□□□ -0.24
DNMT1-213ENST00000587604 OR5K2Q8NHB8 316 aa13.54□□□□□ -0.24
DNMT1-213ENST00000587604 UBE2Q2Q8WVN8 375 aa13.54□□□□□ -0.24
DNMT1-213ENST00000587604 ELMO1Q92556 727 aa13.54□□□□□ -0.24
DNMT1-213ENST00000587604 FAM118BQ9BPY3 351 aa13.54□□□□□ -0.24
DNMT1-213ENST00000587604 ZBTB20Q9HC78 741 aaPredicted RBP13.54□□□□□ -0.24
DNMT1-213ENST00000587604 AGPAT4Q9NRZ5 378 aa13.54□□□□□ -0.24
DNMT1-213ENST00000587604 IRAK4Q9NWZ3 460 aa13.54□□□□□ -0.24
DNMT1-213ENST00000587604 TFR2Q9UP52 801 aa13.54□□□□□ -0.24
DNMT1-213ENST00000587604 PLCL2Q9UPR0 1127 aa13.54□□□□□ -0.24
DNMT1-213ENST00000587604 TDRKHQ9Y2W6 561 aaKnown RBP13.54□□□□□ -0.24
DNMT1-213ENST00000587604 PCDHGA10Q9Y5H3 936 aa13.54□□□□□ -0.24
DNMT1-213ENST00000587604 PRSS21Q9Y6M0 314 aa13.54□□□□□ -0.24
DNMT1-213ENST00000587604 SLC5A10A0PJK1 596 aa13.53□□□□□ -0.24
DNMT1-213ENST00000587604 ISM1B1AKI9 464 aa13.53□□□□□ -0.24
DNMT1-213ENST00000587604 BHMG1C9JSJ3 638 aaPredicted RBP13.53□□□□□ -0.24
DNMT1-213ENST00000587604 MASP2O00187 686 aa13.53□□□□□ -0.24
DNMT1-213ENST00000587604 KDM1AO60341 852 aa13.53□□□□□ -0.24
DNMT1-213ENST00000587604 TJP3O95049 919 aa13.53□□□□□ -0.24
DNMT1-213ENST00000587604 AP2A1O95782 977 aa13.53□□□□□ -0.24
DNMT1-213ENST00000587604 FTH1P02794 183 aa13.53□□□□□ -0.24
DNMT1-213ENST00000587604 ATXN8OSP0DMR3 200 aa13.53□□□□□ -0.24
DNMT1-213ENST00000587604 PSMA3P25788 255 aa13.53□□□□□ -0.24
DNMT1-213ENST00000587604 FOXL2P58012 376 aa13.53□□□□□ -0.24
DNMT1-213ENST00000587604 ITIH4Q14624 930 aa13.53□□□□□ -0.24
DNMT1-213ENST00000587604 SLC9A5Q14940 896 aa13.53□□□□□ -0.24
DNMT1-213ENST00000587604 KIR2DS3Q14952 304 aa13.53□□□□□ -0.24
DNMT1-213ENST00000587604 BRD3Q15059 726 aa13.53□□□□□ -0.24
DNMT1-213ENST00000587604 PARP6Q2NL67 630 aa13.53□□□□□ -0.24
DNMT1-213ENST00000587604 PACS1Q6VY07 963 aa13.53□□□□□ -0.24
DNMT1-213ENST00000587604 MICALCLQ6ZW33 695 aa13.53□□□□□ -0.24
DNMT1-213ENST00000587604 DENND1AQ8TEH3 1009 aa13.53□□□□□ -0.24
DNMT1-213ENST00000587604 ALS2CR12Q96Q35 445 aa13.53□□□□□ -0.24
DNMT1-213ENST00000587604 SLC22A11Q9NSA0 550 aa13.53□□□□□ -0.24
DNMT1-213ENST00000587604 EURLQ9NYK6 297 aa13.53□□□□□ -0.24
DNMT1-213ENST00000587604 NTNG1Q9Y2I2 539 aa13.53□□□□□ -0.24
DNMT1-213ENST00000587604 TEP1Q99973 2627 aaKnown RBP13.52□□□□□ -0.24
DNMT1-213ENST00000587604 ONECUT2O95948 504 aa13.52□□□□□ -0.25
DNMT1-213ENST00000587604 ALAS2P22557 587 aa13.52□□□□□ -0.25
DNMT1-213ENST00000587604 MMP11P24347 488 aa13.52□□□□□ -0.25
DNMT1-213ENST00000587604 ITGA3P26006 1051 aa13.52□□□□□ -0.25
DNMT1-213ENST00000587604 CETN2P41208 172 aa13.52□□□□□ -0.25
DNMT1-213ENST00000587604 GCGRP47871 477 aa13.52□□□□□ -0.25
DNMT1-213ENST00000587604 ARSFP54793 590 aa13.52□□□□□ -0.25
DNMT1-213ENST00000587604 POU6F1Q14863 301 aa13.52□□□□□ -0.25
DNMT1-213ENST00000587604 SPA17Q15506 151 aa13.52□□□□□ -0.25
DNMT1-213ENST00000587604 ARHGEF18Q6ZSZ5 1173 aa13.52□□□□□ -0.25
DNMT1-213ENST00000587604 OVCH1Q7RTY7 1134 aa13.52□□□□□ -0.25
DNMT1-213ENST00000587604 TICAM1Q8IUC6 712 aa13.52□□□□□ -0.25
DNMT1-213ENST00000587604 TMEM151BQ8IW70 566 aa13.52□□□□□ -0.25
DNMT1-213ENST00000587604 CCDC170Q8IYT3 715 aa13.52□□□□□ -0.25
DNMT1-213ENST00000587604 ST6GALNAC3Q8NDV1 305 aa13.52□□□□□ -0.25
DNMT1-213ENST00000587604 DLG3Q92796 817 aa13.52□□□□□ -0.25
DNMT1-213ENST00000587604 FKBP10Q96AY3 582 aa13.52□□□□□ -0.25
DNMT1-213ENST00000587604 CALR3Q96L12 384 aaKnown RBP13.52□□□□□ -0.25
DNMT1-213ENST00000587604 WDR77Q9BQA1 342 aaPredicted RBP13.52□□□□□ -0.25
DNMT1-213ENST00000587604 LRRC40Q9H9A6 602 aa13.52□□□□□ -0.25
DNMT1-213ENST00000587604 LUC7LQ9NQ29 371 aaKnown RBP13.52□□□□□ -0.25
DNMT1-213ENST00000587604 MYO7BQ6PIF6 2116 aa13.51□□□□□ -0.25
DNMT1-213ENST00000587604 CCDC78A2IDD5 438 aa13.51□□□□□ -0.25
DNMT1-213ENST00000587604 MROH6A6NGR9 719 aa13.51□□□□□ -0.25
DNMT1-213ENST00000587604 METTL18O95568 372 aa13.51□□□□□ -0.25
DNMT1-213ENST00000587604 ALBP02768 609 aa13.51□□□□□ -0.25
DNMT1-213ENST00000587604 OR56A5P0C7T3 313 aa13.51□□□□□ -0.25
DNMT1-213ENST00000587604 PIM1P11309 404 aaPredicted RBP13.51□□□□□ -0.25
DNMT1-213ENST00000587604 MSNP26038 577 aaKnown RBP13.51□□□□□ -0.25
DNMT1-213ENST00000587604 PEBP1P30086 187 aaKnown RBP13.51□□□□□ -0.25
DNMT1-213ENST00000587604 RWDD2BP57060 319 aa13.51□□□□□ -0.25
DNMT1-213ENST00000587604 AGAP7PQ5VUJ5 663 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms