RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 PITPNM3Q9BZ71 974 aa14.35□□□□□ -0.11
ATG4D-207ENST00000587256 PPANQ9NQ55 473 aaKnown RBP14.35□□□□□ -0.11
ATG4D-207ENST00000587256 SLC39A10Q9ULF5 831 aa14.35□□□□□ -0.11
ATG4D-207ENST00000587256 TMEM184BQ9Y519 407 aaPredicted RBP14.35□□□□□ -0.11
ATG4D-207ENST00000587256 NFS1Q9Y697 457 aa14.35□□□□□ -0.11
ATG4D-207ENST00000587256 ISM1B1AKI9 464 aa14.34□□□□□ -0.11
ATG4D-207ENST00000587256 EFSO43281 561 aa14.34□□□□□ -0.11
ATG4D-207ENST00000587256 RAD51CO43502 376 aa14.34□□□□□ -0.11
ATG4D-207ENST00000587256 SPAG6O75602 509 aa14.34□□□□□ -0.11
ATG4D-207ENST00000587256 TPBGLP0DKB5 382 aa14.34□□□□□ -0.11
ATG4D-207ENST00000587256 ST6GAL1P15907 406 aa14.34□□□□□ -0.11
ATG4D-207ENST00000587256 ZNF28P17035 718 aa14.34□□□□□ -0.11
ATG4D-207ENST00000587256 MAP4P27816 1152 aaKnown RBP14.34□□□□□ -0.11
ATG4D-207ENST00000587256 CCNFP41002 786 aa14.34□□□□□ -0.11
ATG4D-207ENST00000587256 PDIA2Q13087 525 aaKnown RBP14.34□□□□□ -0.11
ATG4D-207ENST00000587256 KIR2DS3Q14952 304 aa14.34□□□□□ -0.11
ATG4D-207ENST00000587256 KYNUQ16719 465 aa14.34□□□□□ -0.11
ATG4D-207ENST00000587256 TAX1BP1Q86VP1 789 aa14.34□□□□□ -0.11
ATG4D-207ENST00000587256 ANKMY2Q8IV38 441 aa14.34□□□□□ -0.11
ATG4D-207ENST00000587256 IGDCC3Q8IVU1 814 aa14.34□□□□□ -0.11
ATG4D-207ENST00000587256 KCNJ9Q92806 393 aa14.34□□□□□ -0.11
ATG4D-207ENST00000587256 RAD51AP1Q96B01 352 aa14.34□□□□□ -0.11
ATG4D-207ENST00000587256 IL17FQ96PD4 163 aa14.34□□□□□ -0.11
ATG4D-207ENST00000587256 GPN2Q9H9Y4 310 aaPredicted RBP14.34□□□□□ -0.11
ATG4D-207ENST00000587256 LATS2Q9NRM7 1088 aa14.34□□□□□ -0.11
ATG4D-207ENST00000587256 SPHK1Q9NYA1 384 aa14.34□□□□□ -0.11
ATG4D-207ENST00000587256 GALPQ9UBC7 116 aa14.34□□□□□ -0.11
ATG4D-207ENST00000587256 PCDHGA4Q9Y5G9 962 aa14.34□□□□□ -0.11
ATG4D-207ENST00000587256 COMMD10Q9Y6G5 202 aa14.34□□□□□ -0.11
ATG4D-207ENST00000587256 NBEAQ8NFP9 2946 aa14.33□□□□□ -0.12
ATG4D-207ENST00000587256 A0A0J9YY10 115 aa14.33□□□□□ -0.12
ATG4D-207ENST00000587256 RASGRF2O14827 1237 aa14.33□□□□□ -0.12
ATG4D-207ENST00000587256 VPS26AO75436 327 aa14.33□□□□□ -0.12
ATG4D-207ENST00000587256 HAUS5O94927 633 aa14.33□□□□□ -0.12
ATG4D-207ENST00000587256 TIAF1O95411 115 aa14.33□□□□□ -0.12
ATG4D-207ENST00000587256 C1orf105O95561 183 aa14.33□□□□□ -0.12
ATG4D-207ENST00000587256 LIFP15018 202 aa14.33□□□□□ -0.12
ATG4D-207ENST00000587256 CARSP49589 748 aaKnown RBP14.33□□□□□ -0.12
ATG4D-207ENST00000587256 CLCN7P51798 805 aa14.33□□□□□ -0.12
ATG4D-207ENST00000587256 CUL1Q13616 776 aa14.33□□□□□ -0.12
ATG4D-207ENST00000587256 MAP7Q14244 749 aa14.33□□□□□ -0.12
ATG4D-207ENST00000587256 GRB7Q14451 532 aa14.33□□□□□ -0.12
ATG4D-207ENST00000587256 GBX1Q14549 363 aa14.33□□□□□ -0.12
ATG4D-207ENST00000587256 ACSBG2Q5FVE4 666 aa14.33□□□□□ -0.12
ATG4D-207ENST00000587256 ZNF549Q6P9A3 640 aa14.33□□□□□ -0.12
ATG4D-207ENST00000587256 C6orf15Q6UXA7 325 aaPredicted RBP14.33□□□□□ -0.12
ATG4D-207ENST00000587256 TIPARPQ7Z3E1 657 aaKnown RBP14.33□□□□□ -0.12
ATG4D-207ENST00000587256 BPHLQ86WA6 291 aaPredicted RBP14.33□□□□□ -0.12
ATG4D-207ENST00000587256 TMEM126BQ8IUX1 230 aa14.33□□□□□ -0.12
ATG4D-207ENST00000587256 C2orf73Q8N5S3 287 aaPredicted RBP14.33□□□□□ -0.12
ATG4D-207ENST00000587256 C19orf47Q8N9M1 422 aaKnown RBP14.33□□□□□ -0.12
ATG4D-207ENST00000587256 GALNT6Q8NCL4 622 aa14.33□□□□□ -0.12
ATG4D-207ENST00000587256 C2CD4AQ8NCU7 369 aaPredicted RBP14.33□□□□□ -0.12
ATG4D-207ENST00000587256 GIMAP7Q8NHV1 300 aa14.33□□□□□ -0.12
ATG4D-207ENST00000587256 MAGEC3Q8TD91 643 aa14.33□□□□□ -0.12
ATG4D-207ENST00000587256 ZNF592Q92610 1267 aa14.33□□□□□ -0.12
ATG4D-207ENST00000587256 N4BP2L2Q92802 583 aaPredicted RBP14.33□□□□□ -0.12
ATG4D-207ENST00000587256 TRAPPC9Q96Q05 1148 aa14.33□□□□□ -0.12
ATG4D-207ENST00000587256 OR2A14Q96R47 310 aa14.33□□□□□ -0.12
ATG4D-207ENST00000587256 UBL7Q96S82 380 aaPredicted RBP14.33□□□□□ -0.12
ATG4D-207ENST00000587256 GPR21Q99679 349 aa14.33□□□□□ -0.12
ATG4D-207ENST00000587256 WDR83Q9BRX9 315 aaKnown RBP14.33□□□□□ -0.12
ATG4D-207ENST00000587256 ERP44Q9BS26 406 aa14.33□□□□□ -0.12
ATG4D-207ENST00000587256 SLC17A6Q9P2U8 582 aa14.33□□□□□ -0.12
ATG4D-207ENST00000587256 TEX264Q9Y6I9 313 aa14.33□□□□□ -0.12
ATG4D-207ENST00000587256 IGSF10Q6WRI0 2623 aa14.32□□□□□ -0.12
ATG4D-207ENST00000587256 TMEM150CB9EJG8 249 aa14.32□□□□□ -0.12
ATG4D-207ENST00000587256 CPNE3O75131 537 aaKnown RBP14.32□□□□□ -0.12
ATG4D-207ENST00000587256 SCRG1O75711 98 aa14.32□□□□□ -0.12
ATG4D-207ENST00000587256 URI1O94763 535 aaPredicted RBP14.32□□□□□ -0.12
ATG4D-207ENST00000587256 MT-ND3P03897 115 aa14.32□□□□□ -0.12
ATG4D-207ENST00000587256 CD9P21926 228 aa14.32□□□□□ -0.12
ATG4D-207ENST00000587256 PEBP1P30086 187 aaKnown RBP14.32□□□□□ -0.12
ATG4D-207ENST00000587256 STAT5AP42229 794 aa14.32□□□□□ -0.12
ATG4D-207ENST00000587256 RHDQ02161 417 aa14.32□□□□□ -0.12
ATG4D-207ENST00000587256 ABHD18Q0P651 414 aa14.32□□□□□ -0.12
ATG4D-207ENST00000587256 SLC5A12Q1EHB4 618 aa14.32□□□□□ -0.12
ATG4D-207ENST00000587256 KLHL38Q2WGJ6 581 aa14.32□□□□□ -0.12
ATG4D-207ENST00000587256 KIAA1614Q5VZ46 1190 aa14.32□□□□□ -0.12
ATG4D-207ENST00000587256 STEAP4Q687X5 459 aa14.32□□□□□ -0.12
ATG4D-207ENST00000587256 PWWP2BQ6NUJ5 590 aa14.32□□□□□ -0.12
ATG4D-207ENST00000587256 KIAA0408Q6ZU52 694 aa14.32□□□□□ -0.12
ATG4D-207ENST00000587256 CNTN4Q8IWV2 1026 aa14.32□□□□□ -0.12
ATG4D-207ENST00000587256 LMNTD1Q8N9Z9 388 aa14.32□□□□□ -0.12
ATG4D-207ENST00000587256 LINC01555Q8NAE3 123 aa14.32□□□□□ -0.12
ATG4D-207ENST00000587256 FBXO36Q8NEA4 188 aa14.32□□□□□ -0.12
ATG4D-207ENST00000587256 OR2L8Q8NGY9 312 aa14.32□□□□□ -0.12
ATG4D-207ENST00000587256 OR8K5Q8NH50 307 aa14.32□□□□□ -0.12
ATG4D-207ENST00000587256 SNRNP27Q8WVK2 155 aaKnown RBP14.32□□□□□ -0.12
ATG4D-207ENST00000587256 SLC22A18Q96BI1 424 aa14.32□□□□□ -0.12
ATG4D-207ENST00000587256 ZNF501Q96CX3 271 aaPredicted RBP14.32□□□□□ -0.12
ATG4D-207ENST00000587256 FCRL4Q96PJ5 515 aa14.32□□□□□ -0.12
ATG4D-207ENST00000587256 NDNQ99608 321 aa14.32□□□□□ -0.12
ATG4D-207ENST00000587256 SLC30A3Q99726 388 aa14.32□□□□□ -0.12
ATG4D-207ENST00000587256 AARSD1Q9BTE6 412 aaKnown RBP14.32□□□□□ -0.12
ATG4D-207ENST00000587256 SPRY4Q9C004 299 aa14.32□□□□□ -0.12
ATG4D-207ENST00000587256 RAB17Q9H0T7 212 aa14.32□□□□□ -0.12
ATG4D-207ENST00000587256 FAM114A2Q9NRY5 505 aa14.32□□□□□ -0.12
ATG4D-207ENST00000587256 WHRNQ9P202 907 aa14.32□□□□□ -0.12
ATG4D-207ENST00000587256 TRMT6Q9UJA5 497 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms