RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 SERPINB12Q96P63 405 aa17.1■□□□□ 0.33
TPM4-206ENST00000587201 RUFY1Q96T51 708 aa17.1■□□□□ 0.33
TPM4-206ENST00000587201 TCF12Q99081 682 aa17.1■□□□□ 0.33
TPM4-206ENST00000587201 TWSG1Q9GZX9 223 aa17.1■□□□□ 0.33
TPM4-206ENST00000587201 SLC25A18Q9H1K4 315 aa17.1■□□□□ 0.33
TPM4-206ENST00000587201 ACTL8Q9H568 366 aa17.1■□□□□ 0.33
TPM4-206ENST00000587201 STARD5Q9NSY2 213 aa17.1■□□□□ 0.33
TPM4-206ENST00000587201 CIDEBQ9UHD4 219 aa17.1■□□□□ 0.33
TPM4-206ENST00000587201 NEU2Q9Y3R4 380 aa17.1■□□□□ 0.33
TPM4-206ENST00000587201 BAHCC1Q9P281 2608 aa17.1■□□□□ 0.33
TPM4-206ENST00000587201 FAM237BA0A1B0GVD1 139 aa17.09■□□□□ 0.33
TPM4-206ENST00000587201 E7EQ34 232 aa17.09■□□□□ 0.33
TPM4-206ENST00000587201 CES2O00748 559 aa17.09■□□□□ 0.33
TPM4-206ENST00000587201 OGNP20774 298 aaKnown RBP17.09■□□□□ 0.33
TPM4-206ENST00000587201 PEBP1P30086 187 aaKnown RBP17.09■□□□□ 0.33
TPM4-206ENST00000587201 ITGA1P56199 1179 aa17.09■□□□□ 0.33
TPM4-206ENST00000587201 PPP1R7Q15435 360 aa17.09■□□□□ 0.33
TPM4-206ENST00000587201 SLC5A12Q1EHB4 618 aa17.09■□□□□ 0.33
TPM4-206ENST00000587201 PLEKHS1Q5SXH7 462 aa17.09■□□□□ 0.33
TPM4-206ENST00000587201 LPGAT1Q92604 370 aa17.09■□□□□ 0.33
TPM4-206ENST00000587201 LRFN5Q96NI6 719 aa17.09■□□□□ 0.33
TPM4-206ENST00000587201 BIRC8Q96P09 236 aa17.09■□□□□ 0.33
TPM4-206ENST00000587201 IL17FQ96PD4 163 aa17.09■□□□□ 0.33
TPM4-206ENST00000587201 TRIM56Q9BRZ2 755 aaKnown RBP17.09■□□□□ 0.33
TPM4-206ENST00000587201 GPR87Q9BY21 358 aa17.09■□□□□ 0.33
TPM4-206ENST00000587201 ACTR5Q9H9F9 607 aaPredicted RBP17.09■□□□□ 0.33
TPM4-206ENST00000587201 FAM60AQ9NP50 221 aa17.09■□□□□ 0.33
TPM4-206ENST00000587201 IL1RAPL1Q9NZN1 696 aa17.09■□□□□ 0.33
TPM4-206ENST00000587201 SLC39A10Q9ULF5 831 aa17.09■□□□□ 0.33
TPM4-206ENST00000587201 POLHQ9Y253 713 aa17.09■□□□□ 0.33
TPM4-206ENST00000587201 FARSAQ9Y285 508 aaKnown RBP17.09■□□□□ 0.33
TPM4-206ENST00000587201 CRYL1Q9Y2S2 319 aa17.09■□□□□ 0.33
TPM4-206ENST00000587201 H3BMM5 538 aa17.08■□□□□ 0.32
TPM4-206ENST00000587201 MEN1O00255 615 aa17.08■□□□□ 0.32
TPM4-206ENST00000587201 SLC28A2O43868 658 aa17.08■□□□□ 0.32
TPM4-206ENST00000587201 NIPSNAP2O75323 286 aa17.08■□□□□ 0.32
TPM4-206ENST00000587201 RECKO95980 971 aa17.08■□□□□ 0.32
TPM4-206ENST00000587201 FURINP09958 794 aa17.08■□□□□ 0.32
TPM4-206ENST00000587201 CHRM3P20309 590 aa17.08■□□□□ 0.32
TPM4-206ENST00000587201 CD9P21926 228 aa17.08■□□□□ 0.32
TPM4-206ENST00000587201 PTPN4P29074 926 aa17.08■□□□□ 0.32
TPM4-206ENST00000587201 RPS18P62269 152 aaKnown RBP17.08■□□□□ 0.32
TPM4-206ENST00000587201 NFKB2Q00653 900 aa17.08■□□□□ 0.32
TPM4-206ENST00000587201 THOC5Q13769 683 aaKnown RBP17.08■□□□□ 0.32
TPM4-206ENST00000587201 ZIC1Q15915 447 aa17.08■□□□□ 0.32
TPM4-206ENST00000587201 ANKRD20A4Q4UJ75 823 aa17.08■□□□□ 0.32
TPM4-206ENST00000587201 ZNF789Q5FWF6 425 aa17.08■□□□□ 0.32
TPM4-206ENST00000587201 NEPROQ6NW34 567 aa17.08■□□□□ 0.32
TPM4-206ENST00000587201 PRICKLE2Q7Z3G6 844 aa17.08■□□□□ 0.32
TPM4-206ENST00000587201 GPR135Q8IZ08 494 aa17.08■□□□□ 0.32
TPM4-206ENST00000587201 DSELQ8IZU8 1212 aa17.08■□□□□ 0.32
TPM4-206ENST00000587201 C2orf73Q8N5S3 287 aaPredicted RBP17.08■□□□□ 0.32
TPM4-206ENST00000587201 NAT8LQ8N9F0 302 aa17.08■□□□□ 0.32
TPM4-206ENST00000587201 LMNTD1Q8N9Z9 388 aa17.08■□□□□ 0.32
TPM4-206ENST00000587201 LINC01555Q8NAE3 123 aa17.08■□□□□ 0.32
TPM4-206ENST00000587201 FLVCR1-AS1Q8TAF5 88 aa17.08■□□□□ 0.32
TPM4-206ENST00000587201 SEC14L1Q92503 715 aa17.08■□□□□ 0.32
TPM4-206ENST00000587201 FAM136AQ96C01 138 aa17.08■□□□□ 0.32
TPM4-206ENST00000587201 FOPNLQ96NB1 174 aa17.08■□□□□ 0.32
TPM4-206ENST00000587201 MENTQ9BUN1 341 aa17.08■□□□□ 0.32
TPM4-206ENST00000587201 CHST8Q9H2A9 424 aa17.08■□□□□ 0.32
TPM4-206ENST00000587201 PCMTD2Q9NV79 361 aa17.08■□□□□ 0.32
TPM4-206ENST00000587201 TUBD1Q9UJT1 453 aa17.08■□□□□ 0.32
TPM4-206ENST00000587201 MRFAP1Q9Y605 127 aa17.08■□□□□ 0.32
TPM4-206ENST00000587201 NFS1Q9Y697 457 aa17.08■□□□□ 0.32
TPM4-206ENST00000587201 MAD1L1Q9Y6D9 718 aa17.08■□□□□ 0.32
TPM4-206ENST00000587201 ZNF462Q96JM2 2506 aa17.07■□□□□ 0.32
TPM4-206ENST00000587201 RASGRF2O14827 1237 aa17.07■□□□□ 0.32
TPM4-206ENST00000587201 ZNF749O43361 778 aa17.07■□□□□ 0.32
TPM4-206ENST00000587201 ESR1P03372 595 aa17.07■□□□□ 0.32
TPM4-206ENST00000587201 TCP1P17987 556 aaKnown RBP17.07■□□□□ 0.32
TPM4-206ENST00000587201 BDKRB1P46663 353 aa17.07■□□□□ 0.32
TPM4-206ENST00000587201 ADARP55265 1226 aaKnown RBP17.07■□□□□ 0.32
TPM4-206ENST00000587201 GRB7Q14451 532 aa17.07■□□□□ 0.32
TPM4-206ENST00000587201 DEFB110Q30KQ9 67 aa17.07■□□□□ 0.32
TPM4-206ENST00000587201 ZNF517Q6ZMY9 492 aaPredicted RBP17.07■□□□□ 0.32
TPM4-206ENST00000587201 CENPUQ71F23 418 aa17.07■□□□□ 0.32
TPM4-206ENST00000587201 TMEM135Q86UB9 458 aa17.07■□□□□ 0.32
TPM4-206ENST00000587201 TAX1BP1Q86VP1 789 aa17.07■□□□□ 0.32
TPM4-206ENST00000587201 CILP2Q8IUL8 1156 aa17.07■□□□□ 0.32
TPM4-206ENST00000587201 FAM20CQ8IXL6 584 aa17.07■□□□□ 0.32
TPM4-206ENST00000587201 PPIL6Q8IXY8 311 aa17.07■□□□□ 0.32
TPM4-206ENST00000587201 OR2L8Q8NGY9 312 aa17.07■□□□□ 0.32
TPM4-206ENST00000587201 RAD51AP1Q96B01 352 aa17.07■□□□□ 0.32
TPM4-206ENST00000587201 SLC22A18Q96BI1 424 aa17.07■□□□□ 0.32
TPM4-206ENST00000587201 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.07■□□□□ 0.32
TPM4-206ENST00000587201 TSR3Q9UJK0 312 aaKnown RBP17.07■□□□□ 0.32
TPM4-206ENST00000587201 RUVBL2Q9Y230 463 aaKnown RBP17.07■□□□□ 0.32
TPM4-206ENST00000587201 VPS9D1Q9Y2B5 631 aa17.07■□□□□ 0.32
TPM4-206ENST00000587201 KCNMB2Q9Y691 235 aa17.07■□□□□ 0.32
TPM4-206ENST00000587201 BSNQ9UPA5 3926 aa17.07■□□□□ 0.32
TPM4-206ENST00000587201 CFAP46Q8IYW2 2715 aa17.06■□□□□ 0.32
TPM4-206ENST00000587201 CTAGE9A4FU28 777 aa17.06■□□□□ 0.32
TPM4-206ENST00000587201 USP27XA6NNY8 438 aa17.06■□□□□ 0.32
TPM4-206ENST00000587201 E5RI56 91 aa17.06■□□□□ 0.32
TPM4-206ENST00000587201 J3QKU1 62 aa17.06■□□□□ 0.32
TPM4-206ENST00000587201 OR2B3O76000 313 aa17.06■□□□□ 0.32
TPM4-206ENST00000587201 C1orf105O95561 183 aa17.06■□□□□ 0.32
TPM4-206ENST00000587201 S1PR4O95977 384 aa17.06■□□□□ 0.32
TPM4-206ENST00000587201 HBQ1P09105 142 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms