RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 TBC1D3Q8IZP1 549 aaPredicted RBP9.07□□□□□ -0.96
SS18-220ENST00000582092 PGBD3Q8N328 593 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 UBTD2Q8WUN7 234 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 ASB11Q8WXH4 323 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 GLMNQ92990 594 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 VOPP1Q96AW1 172 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 CCDC97Q96F63 343 aaPredicted RBP9.07□□□□□ -0.96
SS18-220ENST00000582092 MAELQ96JY0 434 aaKnown RBP9.07□□□□□ -0.96
SS18-220ENST00000582092 CCDC138Q96M89 665 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 HHIPQ96QV1 700 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 KCNA7Q96RP8 456 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 ZBTB18Q99592 522 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 SLC25A23Q9BV35 468 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 ZBTB26Q9HCK0 441 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 DNAJC11Q9NVH1 559 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 CCDC167Q9P0B6 97 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 MOSPD1Q9UJG1 213 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 TMPRSS11EQ9UL52 423 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 SNX6Q9UNH7 406 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 GPR34Q9UPC5 381 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 PDE10AQ9Y233 779 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 EIF3LQ9Y262 564 aaKnown RBP9.07□□□□□ -0.96
SS18-220ENST00000582092 DNAJC15Q9Y5T4 150 aa9.07□□□□□ -0.96
SS18-220ENST00000582092 COPG1Q9Y678 874 aaKnown RBP9.07□□□□□ -0.96
SS18-220ENST00000582092 ZNF106Q9H2Y7 1883 aaKnown RBP9.06□□□□□ -0.96
SS18-220ENST00000582092 PLXND1Q9Y4D7 1925 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 C17orf113A0A1B0GUU1 675 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 MGAT4DA6NG13 374 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 IFRD1O00458 451 aaPredicted RBP9.06□□□□□ -0.96
SS18-220ENST00000582092 PPP6CO00743 305 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 ANGPT2O15123 496 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 TAPBPO15533 448 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 HRO43593 1189 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 JUNP05412 331 aaKnown RBP9.06□□□□□ -0.96
SS18-220ENST00000582092 EBLN1P0CF75 366 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 PI4KAP42356 2102 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 HALP42357 657 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 DPP6P42658 865 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 GDF5P43026 501 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 PXNP49023 591 aaPredicted RBP9.06□□□□□ -0.96
SS18-220ENST00000582092 CTSCP53634 463 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 KCNK10P57789 538 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 RPS14P62263 151 aaKnown RBP9.06□□□□□ -0.96
SS18-220ENST00000582092 SLC25A3Q00325 362 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 TBL3Q12788 808 aaKnown RBP9.06□□□□□ -0.96
SS18-220ENST00000582092 TSTA3Q13630 321 aaPredicted RBP9.06□□□□□ -0.96
SS18-220ENST00000582092 NR6A1Q15406 480 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 PPP1R3AQ16821 1122 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 C18orf21Q32NC0 220 aaPredicted RBP9.06□□□□□ -0.96
SS18-220ENST00000582092 UGT3A2Q3SY77 523 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 BCL7AQ4VC05 210 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 SGO1Q5FBB7 561 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 PIP5KL1Q5T9C9 394 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 CACHD1Q5VU97 1274 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 ANO7Q6IWH7 933 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 KIAA1161Q6NSJ0 714 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 CRTC3Q6UUV7 619 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 SCIMPQ6UWF3 145 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 ADAMTSL4Q6UY14 1074 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 NET1Q7Z628 596 aaPredicted RBP9.06□□□□□ -0.96
SS18-220ENST00000582092 TRIM74Q86UV6 250 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 KBTBD6Q86V97 674 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 LRRTM4Q86VH4 590 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 AMZ2Q86W34 360 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 ABCA7Q8IZY2 2146 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 RAB42Q8N4Z0 105 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 IL17RCQ8NAC3 791 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 FNDC5Q8NAU1 212 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 FAM13CQ8NE31 585 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 OR4F6Q8NGB9 312 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 HM13Q8TCT9 377 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 EZH1Q92800 747 aaPredicted RBP9.06□□□□□ -0.96
SS18-220ENST00000582092 SIPA1Q96FS4 1042 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 MED8Q96G25 268 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 PPP3R2Q96LZ3 170 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 SLC29A3Q9BZD2 475 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 ELOVL6Q9H5J4 265 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 GID8Q9NWU2 228 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 KLQ9UEF7 1012 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 ZNHIT2Q9UHR6 403 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 NDUFAF1Q9Y375 327 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 DNMT3AQ9Y6K1 912 aaPredicted RBP9.06□□□□□ -0.96
SS18-220ENST00000582092 SCN8AQ9UQD0 1980 aa9.06□□□□□ -0.96
SS18-220ENST00000582092 KLHL33A6NCF5 533 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 BBIP1A8MTZ0 92 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 GPR89AB7ZAQ6 455 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 GFYI3L273 518 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 FFAR3O14843 346 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 KMOO15229 486 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 GPR42O15529 346 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 MAP3K13O43283 966 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 ZNF217O75362 1048 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 GPR89BP0CG08 455 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 SLC2A4P14672 509 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 PCSK2P16519 638 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 MAPK1P28482 360 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 GGT5P36269 586 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 KIR2DL1P43626 348 aaPredicted RBP9.05□□□□□ -0.96
SS18-220ENST00000582092 PREPP48147 710 aa9.05□□□□□ -0.96
SS18-220ENST00000582092 RAP1GDS1P52306 607 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms