RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 NFE2L1Q14494 772 aa13.17□□□□□ -0.3
CSNK1D-220ENST00000581737 SETDB1Q15047 1291 aa13.17□□□□□ -0.3
CSNK1D-220ENST00000581737 METRNLQ641Q3 311 aa13.17□□□□□ -0.3
CSNK1D-220ENST00000581737 ABRAXAS1Q6UWZ7 409 aa13.17□□□□□ -0.3
CSNK1D-220ENST00000581737 SLC35F3Q8IY50 421 aa13.17□□□□□ -0.3
CSNK1D-220ENST00000581737 KIRREL3Q8IZU9 778 aa13.17□□□□□ -0.3
CSNK1D-220ENST00000581737 GPATCH11Q8N954 259 aa13.17□□□□□ -0.3
CSNK1D-220ENST00000581737 GPR156Q8NFN8 814 aa13.17□□□□□ -0.3
CSNK1D-220ENST00000581737 MAPK15Q8TD08 544 aa13.17□□□□□ -0.3
CSNK1D-220ENST00000581737 ASZ1Q8WWH4 475 aa13.17□□□□□ -0.3
CSNK1D-220ENST00000581737 ELMO1Q92556 727 aa13.17□□□□□ -0.3
CSNK1D-220ENST00000581737 ATXN7L3BQ96GX2 97 aa13.17□□□□□ -0.3
CSNK1D-220ENST00000581737 COG4Q9H9E3 785 aa13.17□□□□□ -0.3
CSNK1D-220ENST00000581737 POPDC3Q9HBV1 291 aa13.17□□□□□ -0.3
CSNK1D-220ENST00000581737 SLC17A7Q9P2U7 560 aa13.17□□□□□ -0.3
CSNK1D-220ENST00000581737 CRYL1Q9Y2S2 319 aa13.17□□□□□ -0.3
CSNK1D-220ENST00000581737 ST14Q9Y5Y6 855 aa13.17□□□□□ -0.3
CSNK1D-220ENST00000581737 PRSS21Q9Y6M0 314 aa13.17□□□□□ -0.3
CSNK1D-220ENST00000581737 ZNF462Q96JM2 2506 aa13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 HMX2A2RU54 273 aa13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 A6NCN8 305 aa13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 ZW10O43264 779 aa13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 NOBOXO60393 691 aa13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 PLIN3O60664 434 aa13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 C2P06681 752 aa13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 BPGMP07738 259 aa13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 CDK4P11802 303 aa13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 FMO4P31512 558 aa13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 ILKQ13418 452 aa13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 BOP1Q14137 746 aaKnown RBP13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 FAM83EQ2M2I3 478 aa13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 TTLL9Q3SXZ7 439 aa13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 IYDQ6PHW0 289 aa13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 FAM47EQ6ZV65 393 aa13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 OTOAQ7RTW8 1153 aa13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 SLC9B2Q86UD5 537 aa13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 CRLF3Q8IUI8 442 aa13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 TRIM48Q8IWZ4 208 aa13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 CFAP206Q8IYR0 622 aa13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 SFRP1Q8N474 314 aa13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 NAT14Q8WUY8 206 aa13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 KCNJ9Q92806 393 aa13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 TMEM159Q96B96 161 aa13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 CCDC126Q96EE4 140 aa13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 C7orf26Q96N11 449 aa13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 BIRC8Q96P09 236 aa13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 KLHL42Q9P2K6 505 aa13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 SLC17A6Q9P2U8 582 aa13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 FAM8A1Q9UBU6 413 aa13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 PADI4Q9UM07 663 aa13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 MTO1Q9Y2Z2 717 aaKnown RBP13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 USH1CQ9Y6N9 552 aa13.16□□□□□ -0.3
CSNK1D-220ENST00000581737 MAST4O15021 2626 aa13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 WDR91A4D1P6 747 aa13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 TK2O00142 265 aa13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 IFRD1O00458 451 aaPredicted RBP13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 NUDT21O43809 227 aaKnown RBP13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 VPS26AO75436 327 aa13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 AHSGP02765 367 aa13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 SERPINE1P05121 402 aa13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 MYL2P10916 166 aa13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 GLB1P16278 677 aa13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 CHRM3P20309 590 aa13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 ACP1P24666 158 aa13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 FASLGP48023 281 aa13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 TARDBPQ13148 414 aaKnown RBP eCLIP13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 STX3Q13277 289 aa13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 ZNF658BQ4V348 819 aaPredicted RBP13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 CTSL3PQ5NE16 218 aa13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 PLEKHS1Q5SXH7 462 aa13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 UGT3A1Q6NUS8 523 aa13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 CNSTQ6PJW8 725 aa13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 FAM83HQ6ZRV2 1179 aaPredicted RBP13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 TMPRSS12Q86WS5 348 aa13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 C17orf82Q86X59 251 aaPredicted RBP13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 RBM12BQ8IXT5 1001 aaKnown RBP13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 NAGSQ8N159 534 aa13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 SLC37A2Q8TED4 501 aa13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 SH3KBP1Q96B97 665 aa13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 CXorf40BQ96DE9 158 aa13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 SCYL1Q96KG9 808 aa13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 MCMBPQ9BTE3 642 aa13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 AARSD1Q9BTE6 412 aaKnown RBP13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 ACTR5Q9H9F9 607 aaPredicted RBP13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 NMRAL1Q9HBL8 299 aa13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 SARS2Q9NP81 518 aaKnown RBP13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 PRDM8Q9NQV8 689 aa13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 POT1Q9NUX5 634 aa13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 PCDHGA1Q9Y5H4 931 aa13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 HEBP2Q9Y5Z4 205 aa13.15□□□□□ -0.3
CSNK1D-220ENST00000581737 SLC5A10A0PJK1 596 aa13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 CCDC189A1A4V9 331 aa13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 EME2A4GXA9 379 aaPredicted RBP13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 RHPN2P1A8MT19 583 aa13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 TMEM114B3SHH9 223 aa13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 PYCARD-AS1I3L0S3 204 aa13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 NIPSNAP2O75323 286 aa13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 HAUS5O94927 633 aa13.14□□□□□ -0.31
CSNK1D-220ENST00000581737 VIPP01282 170 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms