RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 ANKRD12Q6UB98 2062 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 FBN2P35556 2912 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 PCSK5Q92824 1860 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 A0A0J9YY10 115 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 SLC5A10A0PJK1 596 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 PEX12O00623 359 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 ZSCAN9O15535 394 aaPredicted RBP10.22□□□□□ -0.77
RFFL-209ENST00000581265 PSMD3O43242 534 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 KRT86O43790 486 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 METTL18O95568 372 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 AP2A1O95782 977 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 FTH1P02794 183 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 ALPPP05187 535 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 FOLR3P41439 243 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 POU6F1Q14863 301 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 NKAIN1Q4KMZ8 207 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 CRB2Q5IJ48 1285 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 AADACL2Q6P093 401 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 MRPL14Q6P1L8 145 aaKnown RBP10.22□□□□□ -0.77
RFFL-209ENST00000581265 TLDC1Q6P9B6 456 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 PACS1Q6VY07 963 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 TRIM73Q86UV7 250 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 IQCKQ8N0W5 287 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 SLC34A3Q8N130 599 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 GALNT16Q8N428 558 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 DNAJC22Q8N4W6 341 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 LRRC57Q8N9N7 239 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 FAM71DQ8N9W8 422 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 CLEC1AQ8NC01 280 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 OR5K2Q8NHB8 316 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 ELMO1Q92556 727 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 SNRNP40Q96DI7 357 aaKnown RBP10.22□□□□□ -0.77
RFFL-209ENST00000581265 C19orf60Q96EN9 201 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 ALS2CR12Q96Q35 445 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 BARD1Q99728 777 aaKnown RBP10.22□□□□□ -0.77
RFFL-209ENST00000581265 TRIM5Q9C035 493 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 ZNF552Q9H707 407 aaPredicted RBP10.22□□□□□ -0.77
RFFL-209ENST00000581265 P4HTMQ9NXG6 502 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 IFT80Q9P2H3 777 aaPredicted RBP10.22□□□□□ -0.77
RFFL-209ENST00000581265 GPN3Q9UHW5 284 aaPredicted RBP10.22□□□□□ -0.77
RFFL-209ENST00000581265 PLCL2Q9UPR0 1127 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 PTRH2Q9Y3E5 179 aaKnown RBP10.22□□□□□ -0.77
RFFL-209ENST00000581265 ITPR2Q14571 2701 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 FER1L5A0AVI2 2057 aa10.22□□□□□ -0.77
RFFL-209ENST00000581265 CCDC88CQ9P219 2028 aa10.21□□□□□ -0.77
RFFL-209ENST00000581265 GOLGA6L9A6NEM1 432 aa10.21□□□□□ -0.77
RFFL-209ENST00000581265 KDM1AO60341 852 aa10.21□□□□□ -0.77
RFFL-209ENST00000581265 CNOT3O75175 753 aaKnown RBP10.21□□□□□ -0.77
RFFL-209ENST00000581265 IPO13O94829 963 aaKnown RBP10.21□□□□□ -0.77
RFFL-209ENST00000581265 ONECUT2O95948 504 aa10.21□□□□□ -0.77
RFFL-209ENST00000581265 CTSBP07858 339 aa10.21□□□□□ -0.77
RFFL-209ENST00000581265 OR56A5P0C7T3 313 aa10.21□□□□□ -0.77
RFFL-209ENST00000581265 MSNP26038 577 aaKnown RBP10.21□□□□□ -0.77
RFFL-209ENST00000581265 FOXN2P32314 431 aa10.21□□□□□ -0.77
RFFL-209ENST00000581265 GCGRP47871 477 aa10.21□□□□□ -0.77
RFFL-209ENST00000581265 NAP1L1P55209 391 aaKnown RBP10.21□□□□□ -0.77
RFFL-209ENST00000581265 KLF1Q13351 362 aaPredicted RBP10.21□□□□□ -0.77
RFFL-209ENST00000581265 RAPSNQ13702 412 aa10.21□□□□□ -0.77
RFFL-209ENST00000581265 KIR2DS3Q14952 304 aa10.21□□□□□ -0.77
RFFL-209ENST00000581265 KYNUQ16719 465 aa10.21□□□□□ -0.77
RFFL-209ENST00000581265 SLC5A12Q1EHB4 618 aa10.21□□□□□ -0.77
RFFL-209ENST00000581265 P3H1Q32P28 736 aa10.21□□□□□ -0.77
RFFL-209ENST00000581265 C1orf189Q5VU69 101 aa10.21□□□□□ -0.77
RFFL-209ENST00000581265 LYPLAL1Q5VWZ2 237 aa10.21□□□□□ -0.77
RFFL-209ENST00000581265 LINC00523Q86TU6 105 aa10.21□□□□□ -0.77
RFFL-209ENST00000581265 CISD2Q8N5K1 135 aaKnown RBP10.21□□□□□ -0.77
RFFL-209ENST00000581265 ZNF655Q8N720 491 aaPredicted RBP10.21□□□□□ -0.77
RFFL-209ENST00000581265 SLC35B2Q8TB61 432 aa10.21□□□□□ -0.77
RFFL-209ENST00000581265 PANX2Q96RD6 677 aa10.21□□□□□ -0.77
RFFL-209ENST00000581265 NDC1Q9BTX1 674 aa10.21□□□□□ -0.77
RFFL-209ENST00000581265 LACRTQ9GZZ8 138 aa10.21□□□□□ -0.77
RFFL-209ENST00000581265 RUBCNLQ9H714 662 aa10.21□□□□□ -0.77
RFFL-209ENST00000581265 ATP13A2Q9NQ11 1180 aa10.21□□□□□ -0.77
RFFL-209ENST00000581265 TXLNGQ9NUQ3 528 aa10.21□□□□□ -0.77
RFFL-209ENST00000581265 ASF1BQ9NVP2 202 aa10.21□□□□□ -0.77
RFFL-209ENST00000581265 DHCR7Q9UBM7 475 aaKnown RBP10.21□□□□□ -0.77
RFFL-209ENST00000581265 CDYLQ9Y232 598 aa10.21□□□□□ -0.77
RFFL-209ENST00000581265 TDRKHQ9Y2W6 561 aaKnown RBP10.21□□□□□ -0.77
RFFL-209ENST00000581265 ARHGAP10A1A4S6 786 aa10.2□□□□□ -0.78
RFFL-209ENST00000581265 CCDC78A2IDD5 438 aa10.2□□□□□ -0.78
RFFL-209ENST00000581265 CCDC162PA2VCL2 907 aa10.2□□□□□ -0.78
RFFL-209ENST00000581265 GRID2IPA4D2P6 1211 aa10.2□□□□□ -0.78
RFFL-209ENST00000581265 SOWAHDA6NJG2 315 aa10.2□□□□□ -0.78
RFFL-209ENST00000581265 F8W8V4 182 aa10.2□□□□□ -0.78
RFFL-209ENST00000581265 IPO7O95373 1038 aaKnown RBP10.2□□□□□ -0.78
RFFL-209ENST00000581265 UMODP07911 640 aa10.2□□□□□ -0.78
RFFL-209ENST00000581265 GDF10P55107 478 aa10.2□□□□□ -0.78
RFFL-209ENST00000581265 MDC1Q14676 2089 aaKnown RBP10.2□□□□□ -0.78
RFFL-209ENST00000581265 BRD3Q15059 726 aa10.2□□□□□ -0.78
RFFL-209ENST00000581265 DEFB110Q30KQ9 67 aa10.2□□□□□ -0.78
RFFL-209ENST00000581265 DNAJC21Q5F1R6 531 aaKnown RBP10.2□□□□□ -0.78
RFFL-209ENST00000581265 Q6ZS92 163 aa10.2□□□□□ -0.78
RFFL-209ENST00000581265 PPP1R32Q7Z5V6 425 aa10.2□□□□□ -0.78
RFFL-209ENST00000581265 SLC22A15Q8IZD6 547 aa10.2□□□□□ -0.78
RFFL-209ENST00000581265 ZADH2Q8N4Q0 377 aa10.2□□□□□ -0.78
RFFL-209ENST00000581265 DENND1AQ8TEH3 1009 aa10.2□□□□□ -0.78
RFFL-209ENST00000581265 TM9SF4Q92544 642 aa10.2□□□□□ -0.78
RFFL-209ENST00000581265 MARVELD3Q96A59 401 aa10.2□□□□□ -0.78
RFFL-209ENST00000581265 C5orf34Q96MH7 638 aa10.2□□□□□ -0.78
RFFL-209ENST00000581265 TTC1Q99614 292 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms