RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 ZSCAN9O15535 394 aaPredicted RBP10.72□□□□□ -0.69
SUPT4H1-203ENST00000579289 OR2B3O76000 313 aa10.72□□□□□ -0.69
SUPT4H1-203ENST00000579289 MED26O95402 600 aa10.72□□□□□ -0.69
SUPT4H1-203ENST00000579289 NADKO95544 446 aaPredicted RBP10.72□□□□□ -0.69
SUPT4H1-203ENST00000579289 MT-CYBP00156 380 aaPredicted RBP10.72□□□□□ -0.69
SUPT4H1-203ENST00000579289 ALBP02768 609 aa10.72□□□□□ -0.69
SUPT4H1-203ENST00000579289 CD63P08962 238 aa10.72□□□□□ -0.69
SUPT4H1-203ENST00000579289 COMTP21964 271 aa10.72□□□□□ -0.69
SUPT4H1-203ENST00000579289 PTPRCAPQ14761 206 aa10.72□□□□□ -0.69
SUPT4H1-203ENST00000579289 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.72□□□□□ -0.69
SUPT4H1-203ENST00000579289 BCL7AQ4VC05 210 aa10.72□□□□□ -0.69
SUPT4H1-203ENST00000579289 LDLRAP1Q5SW96 308 aa10.72□□□□□ -0.69
SUPT4H1-203ENST00000579289 ATG9BQ674R7 924 aa10.72□□□□□ -0.69
SUPT4H1-203ENST00000579289 ARMC6Q6NXE6 501 aa10.72□□□□□ -0.69
SUPT4H1-203ENST00000579289 MTFR2Q6P444 385 aa10.72□□□□□ -0.69
SUPT4H1-203ENST00000579289 SPESP1Q6UW49 350 aa10.72□□□□□ -0.69
SUPT4H1-203ENST00000579289 MICALCLQ6ZW33 695 aa10.72□□□□□ -0.69
SUPT4H1-203ENST00000579289 ZNF655Q8N720 491 aaPredicted RBP10.72□□□□□ -0.69
SUPT4H1-203ENST00000579289 NRGNQ92686 78 aa10.72□□□□□ -0.69
SUPT4H1-203ENST00000579289 FKBP10Q96AY3 582 aa10.72□□□□□ -0.69
SUPT4H1-203ENST00000579289 RNF25Q96BH1 459 aaPredicted RBP10.72□□□□□ -0.69
SUPT4H1-203ENST00000579289 THOC3Q96J01 351 aaKnown RBP10.72□□□□□ -0.69
SUPT4H1-203ENST00000579289 PANX2Q96RD6 677 aa10.72□□□□□ -0.69
SUPT4H1-203ENST00000579289 CEP41Q9BYV8 373 aa10.72□□□□□ -0.69
SUPT4H1-203ENST00000579289 SRMSQ9H3Y6 488 aa10.72□□□□□ -0.69
SUPT4H1-203ENST00000579289 XKR8Q9H6D3 395 aa10.72□□□□□ -0.69
SUPT4H1-203ENST00000579289 EPS8L2Q9H6S3 715 aa10.72□□□□□ -0.69
SUPT4H1-203ENST00000579289 SPHK1Q9NYA1 384 aa10.72□□□□□ -0.69
SUPT4H1-203ENST00000579289 ACTR10Q9NZ32 417 aa10.72□□□□□ -0.69
SUPT4H1-203ENST00000579289 ICKQ9UPZ9 632 aa10.72□□□□□ -0.69
SUPT4H1-203ENST00000579289 GSAPA4D1B5 854 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 SOWAHDA6NJG2 315 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 SPOPO43791 374 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 SLC19A2O60779 497 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 SLC4A1P02730 911 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 KRT1P04264 644 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 UGT2B7P16662 529 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 NDUFS1P28331 727 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 PDHA2P29803 388 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 PBLDP30039 288 aaPredicted RBP10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 DNAJA1P31689 397 aaKnown RBP10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 CD68P34810 354 aaPredicted RBP10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 SLC1A1P43005 524 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 HCFC1P51610 2035 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 EFNA3P52797 238 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 IST1P53990 364 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 TFF3Q07654 80 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 PRKAA1Q13131 559 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 GTF2H3Q13889 308 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 BOP1Q14137 746 aaKnown RBP10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 SPA17Q15506 151 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 LONRF1Q17RB8 773 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 SLC5A12Q1EHB4 618 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 FNBP1LQ5T0N5 605 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 LRRC38Q5VT99 294 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 KDELC1Q6UW63 502 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 CEP97Q8IW35 865 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 CCDC170Q8IYT3 715 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 PLD5Q8N7P1 536 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 CCNYQ8ND76 341 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 LCN9Q8WX39 176 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 ZNF285Q96NJ3 590 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 DMRTA2Q96SC8 542 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 NDC1Q9BTX1 674 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 MAK16Q9BXY0 300 aaKnown RBP10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 SLC25A51Q9H1U9 297 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 GOLPH3Q9H4A6 298 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 NPDC1Q9NQX5 325 aaPredicted RBP10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 CTSFQ9UBX1 484 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 SEC14L3Q9UDX4 400 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 NDOR1Q9UHB4 597 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 GPN3Q9UHW5 284 aaPredicted RBP10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 SH3BGRL2Q9UJC5 107 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 MEMO1Q9Y316 297 aa10.71□□□□□ -0.69
SUPT4H1-203ENST00000579289 RCCD1A6NED2 376 aa10.7□□□□□ -0.7
SUPT4H1-203ENST00000579289 ZNF487B1APH4 448 aa10.7□□□□□ -0.7
SUPT4H1-203ENST00000579289 APOL1O14791 398 aa10.7□□□□□ -0.7
SUPT4H1-203ENST00000579289 ZNHIT1O43257 154 aa10.7□□□□□ -0.7
SUPT4H1-203ENST00000579289 NDST3O95803 873 aa10.7□□□□□ -0.7
SUPT4H1-203ENST00000579289 POLBP06746 335 aa10.7□□□□□ -0.7
SUPT4H1-203ENST00000579289 CELA2AP08217 269 aa10.7□□□□□ -0.7
SUPT4H1-203ENST00000579289 COX6A1P12074 109 aa10.7□□□□□ -0.7
SUPT4H1-203ENST00000579289 MX2P20592 715 aa10.7□□□□□ -0.7
SUPT4H1-203ENST00000579289 CYLC1P35663 651 aaPredicted RBP10.7□□□□□ -0.7
SUPT4H1-203ENST00000579289 HADHBP55084 474 aaKnown RBP10.7□□□□□ -0.7
SUPT4H1-203ENST00000579289 PMP22Q01453 160 aa10.7□□□□□ -0.7
SUPT4H1-203ENST00000579289 MSLNQ13421 630 aaPredicted RBP10.7□□□□□ -0.7
SUPT4H1-203ENST00000579289 TUBB8Q3ZCM7 444 aa10.7□□□□□ -0.7
SUPT4H1-203ENST00000579289 SLC9A4Q6AI14 798 aa10.7□□□□□ -0.7
SUPT4H1-203ENST00000579289 TLDC1Q6P9B6 456 aa10.7□□□□□ -0.7
SUPT4H1-203ENST00000579289 NPNTQ6UXI9 565 aa10.7□□□□□ -0.7
SUPT4H1-203ENST00000579289 FAM151BQ6UXP7 276 aa10.7□□□□□ -0.7
SUPT4H1-203ENST00000579289 RAD9BQ6WBX8 426 aa10.7□□□□□ -0.7
SUPT4H1-203ENST00000579289 SHISA6Q6ZSJ9 500 aa10.7□□□□□ -0.7
SUPT4H1-203ENST00000579289 DET1Q7L5Y6 550 aa10.7□□□□□ -0.7
SUPT4H1-203ENST00000579289 FGD2Q7Z6J4 655 aa10.7□□□□□ -0.7
SUPT4H1-203ENST00000579289 AMIGO1Q86WK6 493 aa10.7□□□□□ -0.7
SUPT4H1-203ENST00000579289 RFX6Q8HWS3 928 aa10.7□□□□□ -0.7
SUPT4H1-203ENST00000579289 GPR135Q8IZ08 494 aa10.7□□□□□ -0.7
SUPT4H1-203ENST00000579289 PHC3Q8NDX5 983 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms