RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 CCT8L2Q96SF2 557 aa13.06□□□□□ -0.32
SRSF1-202ENST00000578430 INSM2Q96T92 566 aaPredicted RBP13.06□□□□□ -0.32
SRSF1-202ENST00000578430 PKP4Q99569 1192 aa13.06□□□□□ -0.32
SRSF1-202ENST00000578430 SIKE1Q9BRV8 207 aa13.06□□□□□ -0.32
SRSF1-202ENST00000578430 RAB11FIP5Q9BXF6 653 aa13.06□□□□□ -0.32
SRSF1-202ENST00000578430 SLC32A1Q9H598 525 aa13.06□□□□□ -0.32
SRSF1-202ENST00000578430 DNAJC28Q9NX36 388 aa13.06□□□□□ -0.32
SRSF1-202ENST00000578430 SPATA7Q9P0W8 599 aa13.06□□□□□ -0.32
SRSF1-202ENST00000578430 OPTCQ9UBM4 332 aa13.06□□□□□ -0.32
SRSF1-202ENST00000578430 SPASTQ9UBP0 616 aa13.06□□□□□ -0.32
SRSF1-202ENST00000578430 TBC1D29Q9UFV1 150 aa13.06□□□□□ -0.32
SRSF1-202ENST00000578430 LNPEPQ9UIQ6 1025 aa13.06□□□□□ -0.32
SRSF1-202ENST00000578430 PILRBQ9UKJ0 227 aa13.06□□□□□ -0.32
SRSF1-202ENST00000578430 PCTPQ9UKL6 214 aa13.06□□□□□ -0.32
SRSF1-202ENST00000578430 PSMD13Q9UNM6 376 aa13.06□□□□□ -0.32
SRSF1-202ENST00000578430 KIR2DS5A0A0G2JLQ3 304 aa13.05□□□□□ -0.32
SRSF1-202ENST00000578430 A0A0G2JNG1 304 aa13.05□□□□□ -0.32
SRSF1-202ENST00000578430 A6NCN8 305 aa13.05□□□□□ -0.32
SRSF1-202ENST00000578430 SLCO1B7G3V0H7 640 aa13.05□□□□□ -0.32
SRSF1-202ENST00000578430 KIR2DS3K7RE56 304 aa13.05□□□□□ -0.32
SRSF1-202ENST00000578430 E2F3O00716 465 aa13.05□□□□□ -0.32
SRSF1-202ENST00000578430 ITM2AO43736 263 aa13.05□□□□□ -0.32
SRSF1-202ENST00000578430 KATNA1O75449 491 aa13.05□□□□□ -0.32
SRSF1-202ENST00000578430 SIX3O95343 332 aaPredicted RBP13.05□□□□□ -0.32
SRSF1-202ENST00000578430 MTHFD1P11586 935 aaKnown RBP13.05□□□□□ -0.32
SRSF1-202ENST00000578430 CCND1P24385 295 aa13.05□□□□□ -0.32
SRSF1-202ENST00000578430 AK4P27144 223 aaPredicted RBP13.05□□□□□ -0.32
SRSF1-202ENST00000578430 BDKRB1P46663 353 aa13.05□□□□□ -0.32
SRSF1-202ENST00000578430 SLC6A12P48065 614 aa13.05□□□□□ -0.32
SRSF1-202ENST00000578430 CSNK1EP49674 416 aaKnown RBP13.05□□□□□ -0.32
SRSF1-202ENST00000578430 AGTR2P50052 363 aa13.05□□□□□ -0.32
SRSF1-202ENST00000578430 PKNOX1P55347 436 aa13.05□□□□□ -0.32
SRSF1-202ENST00000578430 SRSF5Q13243 272 aaKnown RBP13.05□□□□□ -0.32
SRSF1-202ENST00000578430 KRT33BQ14525 404 aa13.05□□□□□ -0.32
SRSF1-202ENST00000578430 KIR2DS5Q14953 304 aa13.05□□□□□ -0.32
SRSF1-202ENST00000578430 CLCA4Q14CN2 919 aa13.05□□□□□ -0.32
SRSF1-202ENST00000578430 RPE65Q16518 533 aa13.05□□□□□ -0.32
SRSF1-202ENST00000578430 SLC30A9Q6PML9 568 aa13.05□□□□□ -0.32
SRSF1-202ENST00000578430 GKN2Q86XP6 184 aa13.05□□□□□ -0.32
SRSF1-202ENST00000578430 SYT12Q8IV01 421 aa13.05□□□□□ -0.32
SRSF1-202ENST00000578430 WDR75Q8IWA0 830 aaKnown RBP13.05□□□□□ -0.32
SRSF1-202ENST00000578430 AVL9Q8NBF6 648 aa13.05□□□□□ -0.32
SRSF1-202ENST00000578430 OR5AR1Q8NGP9 310 aa13.05□□□□□ -0.32
SRSF1-202ENST00000578430 CEP76Q8TAP6 659 aa13.05□□□□□ -0.32
SRSF1-202ENST00000578430 PIWIL2Q8TC59 973 aaKnown RBP13.05□□□□□ -0.32
SRSF1-202ENST00000578430 FAR2Q96K12 515 aa13.05□□□□□ -0.32
SRSF1-202ENST00000578430 FERD3LQ96RJ6 166 aa13.05□□□□□ -0.32
SRSF1-202ENST00000578430 SORT1Q99523 831 aa13.05□□□□□ -0.32
SRSF1-202ENST00000578430 TMEM79Q9BSE2 394 aa13.05□□□□□ -0.32
SRSF1-202ENST00000578430 TRIM55Q9BYV6 548 aa13.05□□□□□ -0.32
SRSF1-202ENST00000578430 PRDM8Q9NQV8 689 aa13.05□□□□□ -0.32
SRSF1-202ENST00000578430 STOX2Q9P2F5 926 aaPredicted RBP13.05□□□□□ -0.32
SRSF1-202ENST00000578430 KLF15Q9UIH9 416 aa13.05□□□□□ -0.32
SRSF1-202ENST00000578430 WDR37Q9Y2I8 494 aa13.05□□□□□ -0.32
SRSF1-202ENST00000578430 ST14Q9Y5Y6 855 aa13.05□□□□□ -0.32
SRSF1-202ENST00000578430 ZFC3H1O60293 1989 aaKnown RBP13.04□□□□□ -0.32
SRSF1-202ENST00000578430 NDUFAB1O14561 156 aa13.04□□□□□ -0.32
SRSF1-202ENST00000578430 GIPC1O14908 333 aa13.04□□□□□ -0.32
SRSF1-202ENST00000578430 DFNA5O60443 496 aa13.04□□□□□ -0.32
SRSF1-202ENST00000578430 SLC16A8O95907 504 aa13.04□□□□□ -0.32
SRSF1-202ENST00000578430 ERGP11308 486 aa13.04□□□□□ -0.32
SRSF1-202ENST00000578430 EPB42P16452 691 aa13.04□□□□□ -0.32
SRSF1-202ENST00000578430 IMPA1P29218 277 aa13.04□□□□□ -0.32
SRSF1-202ENST00000578430 CTSKP43235 329 aa13.04□□□□□ -0.32
SRSF1-202ENST00000578430 RXRGP48443 463 aa13.04□□□□□ -0.32
SRSF1-202ENST00000578430 HSPA7P48741 367 aa13.04□□□□□ -0.32
SRSF1-202ENST00000578430 GTF2H2Q13888 395 aa13.04□□□□□ -0.32
SRSF1-202ENST00000578430 SIM2Q14190 667 aaPredicted RBP13.04□□□□□ -0.32
SRSF1-202ENST00000578430 TERF2Q15554 542 aa13.04□□□□□ -0.32
SRSF1-202ENST00000578430 PRRT3Q5FWE3 981 aa13.04□□□□□ -0.32
SRSF1-202ENST00000578430 GTF2H2CQ6P1K8 395 aa13.04□□□□□ -0.32
SRSF1-202ENST00000578430 IYDQ6PHW0 289 aa13.04□□□□□ -0.32
SRSF1-202ENST00000578430 AGTRAPQ6RW13 159 aa13.04□□□□□ -0.32
SRSF1-202ENST00000578430 MBOAT1Q6ZNC8 495 aa13.04□□□□□ -0.32
SRSF1-202ENST00000578430 TAF8Q7Z7C8 310 aa13.04□□□□□ -0.32
SRSF1-202ENST00000578430 RBM12BQ8IXT5 1001 aaKnown RBP13.04□□□□□ -0.32
SRSF1-202ENST00000578430 LSMEM2Q8N112 164 aa13.04□□□□□ -0.32
SRSF1-202ENST00000578430 OR56A3Q8NH54 315 aa13.04□□□□□ -0.32
SRSF1-202ENST00000578430 CCL4L1Q8NHW4 92 aa13.04□□□□□ -0.32
SRSF1-202ENST00000578430 BCAS4Q8TDM0 211 aa13.04□□□□□ -0.32
SRSF1-202ENST00000578430 LOXL4Q96JB6 756 aa13.04□□□□□ -0.32
SRSF1-202ENST00000578430 MAGEB10Q96LZ2 347 aaPredicted RBP13.04□□□□□ -0.32
SRSF1-202ENST00000578430 ZNF382Q96SR6 550 aa13.04□□□□□ -0.32
SRSF1-202ENST00000578430 HGH1Q9BTY7 390 aa13.04□□□□□ -0.32
SRSF1-202ENST00000578430 LRRC61Q9BV99 259 aa13.04□□□□□ -0.32
SRSF1-202ENST00000578430 C20orf27Q9GZN8 174 aa13.04□□□□□ -0.32
SRSF1-202ENST00000578430 IRF2BPLQ9H1B7 796 aa13.04□□□□□ -0.32
SRSF1-202ENST00000578430 TCEAL2Q9H3H9 227 aaPredicted RBP13.04□□□□□ -0.32
SRSF1-202ENST00000578430 KIR3DX1Q9H7L2 352 aa13.04□□□□□ -0.32
SRSF1-202ENST00000578430 IMP3Q9NV31 184 aaKnown RBP13.04□□□□□ -0.32
SRSF1-202ENST00000578430 TAAR2Q9P1P5 351 aa13.04□□□□□ -0.32
SRSF1-202ENST00000578430 VTI1BQ9UEU0 232 aa13.04□□□□□ -0.32
SRSF1-202ENST00000578430 ANGPTL3Q9Y5C1 460 aa13.04□□□□□ -0.32
SRSF1-202ENST00000578430 TNRC6BQ9UPQ9 1833 aaKnown RBP13.04□□□□□ -0.32
SRSF1-202ENST00000578430 A0A1B0GVT2 93 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 LRRC14BA6NHZ5 514 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 SCAMP1O15126 338 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 CCNT2O60583 730 aaKnown RBP13.03□□□□□ -0.32
SRSF1-202ENST00000578430 LYPLA1O75608 230 aaPredicted RBP13.03□□□□□ -0.32
SRSF1-202ENST00000578430 OTCP00480 354 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms