RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 KLC3Q6P597 504 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 ZC3H14Q6PJT7 736 aaKnown RBP7.82□□□□□ -1.16
COPS3-215ENST00000578317 LVRNQ6Q4G3 990 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 CRTC3Q6UUV7 619 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 CHST15Q7LFX5 561 aaPredicted RBP7.82□□□□□ -1.16
COPS3-215ENST00000578317 MTERF4Q7Z6M4 381 aaKnown RBP7.82□□□□□ -1.16
COPS3-215ENST00000578317 CPNE9Q8IYJ1 553 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 ARFGAP2Q8N6H7 521 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 STAG3L4Q8TBR4 150 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 TCP10LQ8TDR4 215 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 ZBTB9Q96C00 473 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 FAM136AQ96C01 138 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 PDXPQ96GD0 296 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 TSNARE1Q96NA8 513 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 MRPL57Q9BQC6 102 aaKnown RBP7.82□□□□□ -1.16
COPS3-215ENST00000578317 LRFN3Q9BTN0 628 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 SLC12A9Q9BXP2 914 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 IRF2BPLQ9H1B7 796 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 OR52A5Q9H2C5 316 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 MRPL46Q9H2W6 279 aaKnown RBP7.82□□□□□ -1.16
COPS3-215ENST00000578317 CNOT10Q9H9A5 744 aaKnown RBP7.82□□□□□ -1.16
COPS3-215ENST00000578317 RDH14Q9HBH5 336 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 SARS2Q9NP81 518 aaKnown RBP7.82□□□□□ -1.16
COPS3-215ENST00000578317 PCMTD2Q9NV79 361 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 TMEM216Q9P0N5 145 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 PRKAB1Q9Y478 270 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 WDR87Q6ZQQ6 2873 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 DNAH14Q0VDD8 3507 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 PLXNA2O75051 1894 aa7.82□□□□□ -1.16
COPS3-215ENST00000578317 TMEM120BA0PK00 339 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 DFNA5O60443 496 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 PLIN3O60664 434 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 SPAG7O75391 227 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 PSIP1O75475 530 aaKnown RBP7.81□□□□□ -1.16
COPS3-215ENST00000578317 ATE1O95260 518 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 C8GP07360 202 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 DHRS4L1P0CG22 281 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 IDSP22304 550 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 CTSKP43235 329 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 C21orf59P57076 290 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 HNRNPKP61978 463 aaKnown RBP eCLIP7.81□□□□□ -1.16
COPS3-215ENST00000578317 IRF9Q00978 393 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 NFE2L1Q14494 772 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 FXNQ16595 210 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 CDKL4Q5MAI5 379 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 ZNF385CQ66K41 422 aaPredicted RBP7.81□□□□□ -1.16
COPS3-215ENST00000578317 SLC23A3Q6PIS1 610 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 FAM83HQ6ZRV2 1179 aaPredicted RBP7.81□□□□□ -1.16
COPS3-215ENST00000578317 ARMCX6Q7L4S7 300 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 HID1Q8IV36 788 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 VRK3Q8IV63 474 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 MYO1HQ8N1T3 1032 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 FSTL5Q8N475 847 aaPredicted RBP7.81□□□□□ -1.16
COPS3-215ENST00000578317 GALNT6Q8NCL4 622 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 FBXO15Q8NCQ5 510 aaPredicted RBP7.81□□□□□ -1.16
COPS3-215ENST00000578317 RDH11Q8TC12 318 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 KCTD4Q8WVF5 259 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 EDARADDQ8WWZ3 215 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 LINGO1Q96FE5 620 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 ZDHHC5Q9C0B5 715 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 TMEM168Q9H0V1 697 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 KCNH6Q9H252 994 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 KCNK9Q9NPC2 374 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 TM7SF3Q9NS93 570 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 KLC4Q9NSK0 619 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 MOSPD1Q9UJG1 213 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 EMCNQ9ULC0 261 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 POLR3KQ9Y2Y1 108 aaPredicted RBP7.81□□□□□ -1.16
COPS3-215ENST00000578317 ST14Q9Y5Y6 855 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 LAMA1P25391 3075 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 MYLKQ15746 1914 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 SCN8AQ9UQD0 1980 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 GON4LQ3T8J9 2241 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 OR5K4A6NMS3 321 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 SYCE1LA8MT33 242 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 ZBTB14O43829 449 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 KERAO60938 352 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 PROCP04070 461 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 ENO2P09104 434 aaPredicted RBP7.81□□□□□ -1.16
COPS3-215ENST00000578317 SBK3P0C264 359 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 ACP5P13686 325 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 TFEBP19484 476 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 NR1D1P20393 614 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 ALAS2P22557 587 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 PDHA2P29803 388 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 KCNC1P48547 511 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 CDKL1Q00532 357 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 ILF3Q12906 894 aaKnown RBP eCLIP7.81□□□□□ -1.16
COPS3-215ENST00000578317 SP140Q13342 867 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 BOP1Q14137 746 aaKnown RBP7.81□□□□□ -1.16
COPS3-215ENST00000578317 ELOCQ15369 112 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 KIF19Q2TAC6 998 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 UAP1L1Q3KQV9 507 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 SYTL3Q4VX76 610 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 TECRLQ5HYJ1 363 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 N4BP2L1Q5TBK1 243 aaPredicted RBP7.81□□□□□ -1.16
COPS3-215ENST00000578317 SBSNQ6UWP8 590 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 UNC5DQ6UXZ4 953 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 NAPRTQ6XQN6 538 aa7.81□□□□□ -1.16
COPS3-215ENST00000578317 C20orf204Q6ZNR8 217 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms