RNA–Protein interactions for RNA: ENST00000575507.1

EDC4-210, Transcript of enhancer of mRNA decapping 4, human

TSL 2

Gene EDC4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDC4-210	ENST00000575507	AARS2	Q5JTZ9	985 aa	Known RBP	13.69	□□□□□ -0.22
EDC4-210	ENST00000575507	TMTC4	Q5T4D3	741 aa		13.69	□□□□□ -0.22
EDC4-210	ENST00000575507	FAM69B	Q5VUD6	431 aa		13.69	□□□□□ -0.22
EDC4-210	ENST00000575507	PTRHD1	Q6GMV3	140 aa	Known RBP	13.69	□□□□□ -0.22
EDC4-210	ENST00000575507	CTAGE6	Q86UF2	777 aa		13.69	□□□□□ -0.22
EDC4-210	ENST00000575507	TMEM126B	Q8IUX1	230 aa		13.69	□□□□□ -0.22
EDC4-210	ENST00000575507	CTAGE4	Q8IX94	777 aa		13.69	□□□□□ -0.22
EDC4-210	ENST00000575507	NAT8L	Q8N9F0	302 aa		13.69	□□□□□ -0.22
EDC4-210	ENST00000575507	ASZ1	Q8WWH4	475 aa		13.69	□□□□□ -0.22
EDC4-210	ENST00000575507	LPGAT1	Q92604	370 aa		13.69	□□□□□ -0.22
EDC4-210	ENST00000575507	SIGLEC10	Q96LC7	697 aa		13.69	□□□□□ -0.22
EDC4-210	ENST00000575507	SERPINB12	Q96P63	405 aa		13.69	□□□□□ -0.22
EDC4-210	ENST00000575507	EFHD1	Q9BUP0	239 aa		13.69	□□□□□ -0.22
EDC4-210	ENST00000575507	SPRTN	Q9H040	489 aa	Predicted RBP	13.69	□□□□□ -0.22
EDC4-210	ENST00000575507	DDX47	Q9H0S4	455 aa	Known RBP	13.69	□□□□□ -0.22
EDC4-210	ENST00000575507	LATS2	Q9NRM7	1088 aa		13.69	□□□□□ -0.22
EDC4-210	ENST00000575507	CRYL1	Q9Y2S2	319 aa		13.69	□□□□□ -0.22
EDC4-210	ENST00000575507	TMEM150C	B9EJG8	249 aa		13.68	□□□□□ -0.22
EDC4-210	ENST00000575507		K7EM74	188 aa		13.68	□□□□□ -0.22
EDC4-210	ENST00000575507	NIPSNAP2	O75323	286 aa		13.68	□□□□□ -0.22
EDC4-210	ENST00000575507	CREG1	O75629	220 aa		13.68	□□□□□ -0.22
EDC4-210	ENST00000575507	S1PR4	O95977	384 aa		13.68	□□□□□ -0.22
EDC4-210	ENST00000575507	MT-ND3	P03897	115 aa		13.68	□□□□□ -0.22
EDC4-210	ENST00000575507	APOA4	P06727	396 aa		13.68	□□□□□ -0.22
EDC4-210	ENST00000575507	CAPN1	P07384	714 aa		13.68	□□□□□ -0.22
EDC4-210	ENST00000575507	MSL3P1	P0C860	447 aa		13.68	□□□□□ -0.22
EDC4-210	ENST00000575507	PKLR	P30613	574 aa		13.68	□□□□□ -0.22
EDC4-210	ENST00000575507	RORA	P35398	523 aa		13.68	□□□□□ -0.22
EDC4-210	ENST00000575507	EIF3B	P55884	814 aa	Known RBP	13.68	□□□□□ -0.22
EDC4-210	ENST00000575507	DHX34	Q14147	1143 aa	Known RBP	13.68	□□□□□ -0.22
EDC4-210	ENST00000575507	CRTC2	Q53ET0	693 aa	Predicted RBP	13.68	□□□□□ -0.22
EDC4-210	ENST00000575507	DNAJC21	Q5F1R6	531 aa	Known RBP	13.68	□□□□□ -0.22
EDC4-210	ENST00000575507	KIAA0930	Q6ICG6	404 aa	Predicted RBP	13.68	□□□□□ -0.22
EDC4-210	ENST00000575507	CYB5D1	Q6P9G0	228 aa		13.68	□□□□□ -0.22
EDC4-210	ENST00000575507	SYDE1	Q6ZW31	735 aa	Predicted RBP	13.68	□□□□□ -0.22
EDC4-210	ENST00000575507	MAATS1	Q7Z4T9	603 aa		13.68	□□□□□ -0.22
EDC4-210	ENST00000575507	KLHL7	Q8IXQ5	586 aa		13.68	□□□□□ -0.22
EDC4-210	ENST00000575507	MCU	Q8NE86	351 aa		13.68	□□□□□ -0.22
EDC4-210	ENST00000575507	OR8K5	Q8NH50	307 aa		13.68	□□□□□ -0.22
EDC4-210	ENST00000575507	FAM136A	Q96C01	138 aa		13.68	□□□□□ -0.22
EDC4-210	ENST00000575507	CHST8	Q9H2A9	424 aa		13.68	□□□□□ -0.22
EDC4-210	ENST00000575507	ACTL8	Q9H568	366 aa		13.68	□□□□□ -0.22
EDC4-210	ENST00000575507	PCMTD2	Q9NV79	361 aa		13.68	□□□□□ -0.22
EDC4-210	ENST00000575507	OR6C2	Q9NZP2	312 aa		13.68	□□□□□ -0.22
EDC4-210	ENST00000575507	PCDHB3	Q9Y5E6	796 aa		13.68	□□□□□ -0.22
EDC4-210	ENST00000575507	KCNMB2	Q9Y691	235 aa		13.68	□□□□□ -0.22
EDC4-210	ENST00000575507	KALRN	O60229	2985 aa		13.67	□□□□□ -0.22
EDC4-210	ENST00000575507	FAM237B	A0A1B0GVD1	139 aa		13.67	□□□□□ -0.22
EDC4-210	ENST00000575507	SDR42E2	A6NKP2	422 aa		13.67	□□□□□ -0.22
EDC4-210	ENST00000575507	ISM1	B1AKI9	464 aa		13.67	□□□□□ -0.22
EDC4-210	ENST00000575507	MEN1	O00255	615 aa		13.67	□□□□□ -0.22
EDC4-210	ENST00000575507	PRICKLE3	O43900	615 aa	Predicted RBP	13.67	□□□□□ -0.22
EDC4-210	ENST00000575507	CPNE3	O75131	537 aa	Known RBP	13.67	□□□□□ -0.22
EDC4-210	ENST00000575507	ZIC2	O95409	532 aa	Predicted RBP	13.67	□□□□□ -0.22
EDC4-210	ENST00000575507	MLN	P12872	115 aa		13.67	□□□□□ -0.22
EDC4-210	ENST00000575507	CD9	P21926	228 aa		13.67	□□□□□ -0.22
EDC4-210	ENST00000575507	PTGIR	P43119	386 aa		13.67	□□□□□ -0.22
EDC4-210	ENST00000575507	CCR10	P46092	362 aa		13.67	□□□□□ -0.22
EDC4-210	ENST00000575507	DR1	Q01658	176 aa		13.67	□□□□□ -0.22
EDC4-210	ENST00000575507	KCNAB2	Q13303	367 aa		13.67	□□□□□ -0.22
EDC4-210	ENST00000575507	GBX1	Q14549	363 aa		13.67	□□□□□ -0.22
EDC4-210	ENST00000575507	DEFB110	Q30KQ9	67 aa		13.67	□□□□□ -0.22
EDC4-210	ENST00000575507	NEPRO	Q6NW34	567 aa		13.67	□□□□□ -0.22
EDC4-210	ENST00000575507	TMEM151B	Q8IW70	566 aa		13.67	□□□□□ -0.22
EDC4-210	ENST00000575507	DENND6A	Q8IWF6	608 aa		13.67	□□□□□ -0.22
EDC4-210	ENST00000575507	DSEL	Q8IZU8	1212 aa		13.67	□□□□□ -0.22
EDC4-210	ENST00000575507	DNAJC22	Q8N4W6	341 aa		13.67	□□□□□ -0.22
EDC4-210	ENST00000575507	C19orf47	Q8N9M1	422 aa	Known RBP	13.67	□□□□□ -0.22
EDC4-210	ENST00000575507	CATSPER2	Q96P56	530 aa		13.67	□□□□□ -0.22
EDC4-210	ENST00000575507	KRT12	Q99456	494 aa		13.67	□□□□□ -0.22
EDC4-210	ENST00000575507	SLC30A3	Q99726	388 aa		13.67	□□□□□ -0.22
EDC4-210	ENST00000575507	SLC25A18	Q9H1K4	315 aa		13.67	□□□□□ -0.22
EDC4-210	ENST00000575507	GNPTG	Q9UJJ9	305 aa		13.67	□□□□□ -0.22
EDC4-210	ENST00000575507	TSR3	Q9UJK0	312 aa	Known RBP	13.67	□□□□□ -0.22
EDC4-210	ENST00000575507	FARSA	Q9Y285	508 aa	Known RBP	13.67	□□□□□ -0.22
EDC4-210	ENST00000575507	MED16	Q9Y2X0	877 aa		13.67	□□□□□ -0.22
EDC4-210	ENST00000575507	ATRX	P46100	2492 aa		13.67	□□□□□ -0.22
EDC4-210	ENST00000575507	CDC14C	A4D256	554 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	C21orf140	B9A014	251 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	ZNF749	O43361	778 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	BANF1	O75531	89 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	C1orf105	O95561	183 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	IVD	P26440	423 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	PTPN4	P29074	926 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	BDKRB1	P46663	353 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	YBX1	P67809	324 aa	Known RBP	13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	SARNP	P82979	210 aa	Known RBP	13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	MC1R	Q01726	317 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	C2orf54	Q08AI8	447 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	CTBP1	Q13363	440 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	IL10RA	Q13651	578 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	KIR2DS3	Q14952	304 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	PPP1R7	Q15435	360 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	SLC5A12	Q1EHB4	618 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	PTCHD3	Q3KNS1	767 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	RNASEH2B	Q5TBB1	312 aa	Known RBP	13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	ZNF385C	Q66K41	422 aa	Predicted RBP	13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	MRNIP	Q6NTE8	343 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	CASC4	Q6P4E1	433 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	ZNF549	Q6P9A3	640 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms