RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 GPR19Q15760 415 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.39□□□□□ -1.07
SMG6-216ENST00000575176 SPANXN3Q5MJ09 141 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 DNTTIP2Q5QJE6 756 aaKnown RBP8.39□□□□□ -1.07
SMG6-216ENST00000575176 TEDDM1Q5T9Z0 273 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 PRAMEF17Q5VTA0 474 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 PWWP2BQ6NUJ5 590 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 CASC4Q6P4E1 433 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 SPESP1Q6UW49 350 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 CDHR3Q6ZTQ4 885 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 AMIGO1Q86WK6 493 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 KMT5CQ86Y97 462 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 TMEM151BQ8IW70 566 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 DCUN1D3Q8IWE4 304 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 FAM20CQ8IXL6 584 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 LMNTD2Q8IXW0 634 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 SIDT2Q8NBJ9 832 aaKnown RBP8.39□□□□□ -1.07
SMG6-216ENST00000575176 ASZ1Q8WWH4 475 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 LCN9Q8WX39 176 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 ANP32BQ92688 251 aaKnown RBP8.39□□□□□ -1.07
SMG6-216ENST00000575176 ZDHHC12Q96GR4 267 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 RUNDC3BQ96NL0 473 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 TEFMQ96QE5 360 aaKnown RBP8.39□□□□□ -1.07
SMG6-216ENST00000575176 OR6C1Q96RD1 312 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 FERD3LQ96RJ6 166 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 RUFY1Q96T51 708 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 OLFM1Q99784 485 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 ERP44Q9BS26 406 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 AARSD1Q9BTE6 412 aaKnown RBP8.39□□□□□ -1.07
SMG6-216ENST00000575176 SLC12A9Q9BXP2 914 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 TRIT1Q9H3H1 467 aaKnown RBP8.39□□□□□ -1.07
SMG6-216ENST00000575176 C1GALT1Q9NS00 363 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 ZDHHC18Q9NUE0 388 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 ACTR10Q9NZ32 417 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 ASF1AQ9Y294 204 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 SNX24Q9Y343 169 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 MRFAP1Q9Y605 127 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 COLEC10Q9Y6Z7 277 aa8.39□□□□□ -1.07
SMG6-216ENST00000575176 IGKV1-8A0A0C4DH67 115 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 FAM187AA6NFU0 413 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 SLC9B1P1A6NJY1 282 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 EFCAB8A8MWE9 144 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 MATN2O00339 956 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 IFRD1O00458 451 aaPredicted RBP8.38□□□□□ -1.07
SMG6-216ENST00000575176 RASGRF2O14827 1237 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 RRP8O43159 456 aaKnown RBP8.38□□□□□ -1.07
SMG6-216ENST00000575176 NDUFS3O75489 264 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 ZBTB11O95625 1053 aaPredicted RBP8.38□□□□□ -1.07
SMG6-216ENST00000575176 AHSGP02765 367 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 ITGAXP20702 1163 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 CD9P21926 228 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 FDXRP22570 491 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 SHMT2P34897 504 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 CSRP3P50461 194 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 TMPRSS3P57727 454 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 GPX6P59796 221 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 SNRPNP63162 240 aaKnown RBP8.38□□□□□ -1.07
SMG6-216ENST00000575176 PLOD1Q02809 727 aaPredicted RBP8.38□□□□□ -1.07
SMG6-216ENST00000575176 GUCY2DQ02846 1103 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 TUBB3Q13509 450 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 FASTKQ14296 549 aaKnown RBP8.38□□□□□ -1.07
SMG6-216ENST00000575176 HIF1AQ16665 826 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 CYP2A13Q16696 494 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 SLC5A12Q1EHB4 618 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 BBS9Q3SYG4 887 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 SYTL3Q4VX76 610 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 HP1BP3Q5SSJ5 553 aaPredicted RBP8.38□□□□□ -1.07
SMG6-216ENST00000575176 DCAF12Q5T6F0 453 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 PTRHD1Q6GMV3 140 aaKnown RBP8.38□□□□□ -1.07
SMG6-216ENST00000575176 LCN10Q6JVE6 187 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 TMEM207Q6UWW9 146 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 CEACAM20Q6UY09 585 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 PIWIL4Q7Z3Z4 852 aaKnown RBP8.38□□□□□ -1.07
SMG6-216ENST00000575176 PCGF5Q86SE9 256 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 ARHGEF39Q8N4T4 335 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 ZBTB2Q8N680 514 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 C19orf47Q8N9M1 422 aaKnown RBP8.38□□□□□ -1.07
SMG6-216ENST00000575176 NOA1Q8NC60 698 aaKnown RBP8.38□□□□□ -1.07
SMG6-216ENST00000575176 FBXO15Q8NCQ5 510 aaPredicted RBP8.38□□□□□ -1.07
SMG6-216ENST00000575176 OR2L8Q8NGY9 312 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 OR1L3Q8NH93 324 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 FBXO25Q8TCJ0 367 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 LRRC39Q96DD0 335 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 ZNF285Q96NJ3 590 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 PANX3Q96QZ0 392 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 CCNL2Q96S94 520 aaPredicted RBP8.38□□□□□ -1.07
SMG6-216ENST00000575176 NDNQ99608 321 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 GPR21Q99679 349 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 FAM167BQ9BTA0 163 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 ASPSCR1Q9BZE9 553 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 TRIM31Q9BZY9 425 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 SEMA4CQ9C0C4 833 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 PHACTR1Q9C0D0 580 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 SRMSQ9H3Y6 488 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 FGF21Q9NSA1 209 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 IARS2Q9NSE4 1012 aaKnown RBP8.38□□□□□ -1.07
SMG6-216ENST00000575176 C20orf96Q9NUD7 363 aaPredicted RBP8.38□□□□□ -1.07
SMG6-216ENST00000575176 OR6C2Q9NZP2 312 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 SAMD15Q9P1V8 674 aa8.38□□□□□ -1.07
SMG6-216ENST00000575176 WHRNQ9P202 907 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms