RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 LMAN2Q12907 356 aa8.74□□□□□ -1.01
NCBP3-204ENST00000574911 TUBA3CQ13748 450 aa8.74□□□□□ -1.01
NCBP3-204ENST00000574911 RAB33AQ14088 237 aa8.74□□□□□ -1.01
NCBP3-204ENST00000574911 ARHGEF7Q14155 803 aa8.74□□□□□ -1.01
NCBP3-204ENST00000574911 SKIV2LQ15477 1246 aaKnown RBP8.74□□□□□ -1.01
NCBP3-204ENST00000574911 DGKKQ5KSL6 1271 aa8.74□□□□□ -1.01
NCBP3-204ENST00000574911 TXNDC8Q6A555 127 aa8.74□□□□□ -1.01
NCBP3-204ENST00000574911 DNAJC14Q6Y2X3 702 aaPredicted RBP8.74□□□□□ -1.01
NCBP3-204ENST00000574911 CLHC1Q8NHS4 586 aa8.74□□□□□ -1.01
NCBP3-204ENST00000574911 FNDC8Q8TC99 324 aa8.74□□□□□ -1.01
NCBP3-204ENST00000574911 BHMTQ93088 406 aa8.74□□□□□ -1.01
NCBP3-204ENST00000574911 MTFMTQ96DP5 389 aaKnown RBP8.74□□□□□ -1.01
NCBP3-204ENST00000574911 SCLYQ96I15 445 aa8.74□□□□□ -1.01
NCBP3-204ENST00000574911 RBM4BQ9BQ04 359 aaKnown RBP8.74□□□□□ -1.01
NCBP3-204ENST00000574911 RBM4Q9BWF3 364 aaKnown RBP8.74□□□□□ -1.01
NCBP3-204ENST00000574911 FANCEQ9HB96 536 aa8.74□□□□□ -1.01
NCBP3-204ENST00000574911 IL21Q9HBE4 155 aa8.74□□□□□ -1.01
NCBP3-204ENST00000574911 HMX1Q9NP08 348 aaPredicted RBP8.74□□□□□ -1.01
NCBP3-204ENST00000574911 ABCB8Q9NUT2 735 aa8.74□□□□□ -1.01
NCBP3-204ENST00000574911 CLEC4EQ9ULY5 219 aa8.74□□□□□ -1.01
NCBP3-204ENST00000574911 FAF1Q9UNN5 650 aaPredicted RBP8.74□□□□□ -1.01
NCBP3-204ENST00000574911 NPIPB15A6NHN6 443 aaPredicted RBP8.73□□□□□ -1.01
NCBP3-204ENST00000574911 A8MX80 341 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 EIF3FO00303 357 aaPredicted RBP8.73□□□□□ -1.01
NCBP3-204ENST00000574911 NOBOXO60393 691 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 INHBBP09529 407 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 PRPS2P11908 318 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 CD247P20963 164 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 PRPH2P23942 346 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 EEF1B2P24534 225 aaKnown RBP8.73□□□□□ -1.01
NCBP3-204ENST00000574911 GSTM2P28161 218 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 CCR7P32248 378 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 RPIAP49247 311 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 B4GALNT1Q00973 533 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 LAPTM5Q13571 262 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 ZXDCQ2QGD7 858 aaPredicted RBP8.73□□□□□ -1.01
NCBP3-204ENST00000574911 GGTA1PQ4G0N0 100 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 FGD3Q5JSP0 725 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 ANKRD34AQ69YU3 496 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.73□□□□□ -1.01
NCBP3-204ENST00000574911 LRRC70Q7Z2Q7 622 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 R3HCC1LQ7Z5L2 792 aaKnown RBP8.73□□□□□ -1.01
NCBP3-204ENST00000574911 TMEM179BQ7Z7N9 219 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 METTL3Q86U44 580 aaKnown RBP8.73□□□□□ -1.01
NCBP3-204ENST00000574911 HS3ST5Q8IZT8 346 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 C10orf111Q8N326 155 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 CHDHQ8NE62 594 aaPredicted RBP8.73□□□□□ -1.01
NCBP3-204ENST00000574911 ZNF555Q8NEP9 628 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 OR5K1Q8NHB7 308 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 NETO1Q8TDF5 533 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 SNX19Q92543 992 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 POP5Q969H6 163 aaKnown RBP8.73□□□□□ -1.01
NCBP3-204ENST00000574911 HHIPL1Q96JK4 782 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 HERC2P3Q9BVR0 1158 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 HECAQ9UBI9 543 aaPredicted RBP8.73□□□□□ -1.01
NCBP3-204ENST00000574911 PDE10AQ9Y233 779 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 DLGAP4Q9Y2H0 992 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 PPIL1Q9Y3C6 166 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 PCDHGA8Q9Y5G5 932 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 CROCCQ5TZA2 2017 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 KIAA1671Q9BY89 1806 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 hCG_2014768A0A024R1R8 64 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 SH3PXD2BA1X283 911 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 PRRG1O14668 218 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 PTPN6P29350 595 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 SERPINA4P29622 427 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 CD70P32970 193 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 PIGAP37287 484 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 DCTP40126 519 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 HNRNPFP52597 415 aaKnown RBP8.73□□□□□ -1.01
NCBP3-204ENST00000574911 EPHB3P54753 998 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 GABARAPL2P60520 117 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 GBX1Q14549 363 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 CPSF6Q16630 551 aaKnown RBP eCLIP8.73□□□□□ -1.011e-7■■□□□ 11.7
NCBP3-204ENST00000574911 C6orf141Q5SZD1 244 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 LAIR2Q6ISS4 152 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 ANKRD26P1Q6NSI1 321 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 GCNT7Q6ZNI0 430 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 TPRG1Q6ZUI0 275 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 ADHFE1Q8IWW8 467 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 SPARTQ8N0X7 666 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 TCAIMQ8N3R3 496 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 ZCCHC7Q8N3Z6 543 aaKnown RBP8.73□□□□□ -1.01
NCBP3-204ENST00000574911 PAF1Q8N7H5 531 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 BEND7Q8N7W2 519 aaPredicted RBP8.73□□□□□ -1.01
NCBP3-204ENST00000574911 TANKQ92844 425 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 THAP11Q96EK4 314 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 HSPBAP1Q96EW2 488 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 HHIPQ96QV1 700 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 INPP5KQ9BT40 448 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 SLC12A9Q9BXP2 914 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 LTB4R2Q9NPC1 389 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 KIAA1522Q9P206 1035 aaPredicted RBP8.73□□□□□ -1.01
NCBP3-204ENST00000574911 INTS6Q9UL03 887 aaKnown RBP8.73□□□□□ -1.01
NCBP3-204ENST00000574911 INSL5Q9Y5Q6 135 aa8.73□□□□□ -1.01
NCBP3-204ENST00000574911 COL4A6Q14031 1691 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 IGLV3-16A0A075B6K0 115 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 SERTM1A2A2V5 107 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 C16orf96A6NNT2 1141 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 NPIPB8E9PQR5 432 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms