RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 LRRC31Q6UY01 552 aa4.79□□□□□ -1.64
PRPF8-211ENST00000574728 SLC36A4Q6YBV0 504 aa4.79□□□□□ -1.64
PRPF8-211ENST00000574728 DPY19L3Q6ZPD9 716 aa4.79□□□□□ -1.64
PRPF8-211ENST00000574728 RFX8Q6ZV50 586 aa4.79□□□□□ -1.64
PRPF8-211ENST00000574728 LPCAT2Q7L5N7 544 aa4.79□□□□□ -1.64
PRPF8-211ENST00000574728 MAVSQ7Z434 540 aa4.79□□□□□ -1.64
PRPF8-211ENST00000574728 PIP4P1Q86T03 277 aa4.79□□□□□ -1.64
PRPF8-211ENST00000574728 PSTKQ8IV42 348 aaKnown RBP4.79□□□□□ -1.64
PRPF8-211ENST00000574728 MMAAQ8IVH4 418 aaKnown RBP4.79□□□□□ -1.64
PRPF8-211ENST00000574728 SYTL1Q8IYJ3 562 aa4.79□□□□□ -1.64
PRPF8-211ENST00000574728 IZUMO1Q8IYV9 350 aa4.79□□□□□ -1.64
PRPF8-211ENST00000574728 PRCCQ92733 491 aaPredicted RBP4.79□□□□□ -1.64
PRPF8-211ENST00000574728 ISG20Q96AZ6 181 aaKnown RBP4.79□□□□□ -1.64
PRPF8-211ENST00000574728 ARRDC3Q96B67 414 aa4.79□□□□□ -1.64
PRPF8-211ENST00000574728 TBC1D31Q96DN5 1066 aa4.79□□□□□ -1.64
PRPF8-211ENST00000574728 HMCESQ96FZ2 354 aa4.79□□□□□ -1.64
PRPF8-211ENST00000574728 NUP85Q9BW27 656 aa4.79□□□□□ -1.64
PRPF8-211ENST00000574728 GPR174Q9BXC1 333 aa4.79□□□□□ -1.64
PRPF8-211ENST00000574728 PCED1AQ9H1Q7 454 aa4.79□□□□□ -1.64
PRPF8-211ENST00000574728 MAGEH1Q9H213 219 aa4.79□□□□□ -1.64
PRPF8-211ENST00000574728 NEUROG2Q9H2A3 272 aa4.79□□□□□ -1.64
PRPF8-211ENST00000574728 TOR3AQ9H497 397 aa4.79□□□□□ -1.64
PRPF8-211ENST00000574728 NHEJ1Q9H9Q4 299 aaPredicted RBP4.79□□□□□ -1.64
PRPF8-211ENST00000574728 BCCIPQ9P287 314 aaKnown RBP eCLIP4.79□□□□□ -1.64
PRPF8-211ENST00000574728 LHX3Q9UBR4 397 aa4.79□□□□□ -1.64
PRPF8-211ENST00000574728 PCSK1NQ9UHG2 260 aa4.79□□□□□ -1.64
PRPF8-211ENST00000574728 VPS28Q9UK41 221 aa4.79□□□□□ -1.64
PRPF8-211ENST00000574728 GMEB2Q9UKD1 530 aa4.79□□□□□ -1.64
PRPF8-211ENST00000574728 FZD4Q9ULV1 537 aa4.79□□□□□ -1.64
PRPF8-211ENST00000574728 SH2B3Q9UQQ2 575 aa4.79□□□□□ -1.64
PRPF8-211ENST00000574728 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.79□□□□□ -1.64
PRPF8-211ENST00000574728 CFAP46Q8IYW2 2715 aa4.79□□□□□ -1.64
PRPF8-211ENST00000574728 A1L4Q6 167 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 TYW5A2RUC4 315 aaKnown RBP4.78□□□□□ -1.64
PRPF8-211ENST00000574728 VWC2LB2RUY7 222 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 EIF3CLB5ME19 914 aaKnown RBP4.78□□□□□ -1.64
PRPF8-211ENST00000574728 J3KR12 359 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 CYR61O00622 381 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 ALOX15BO15296 676 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 INSIG1O15503 277 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 PLRG1O43660 514 aaKnown RBP4.78□□□□□ -1.64
PRPF8-211ENST00000574728 PRAMEF11O60813 436 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 RAMP2O60895 175 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 URI1O94763 535 aaPredicted RBP4.78□□□□□ -1.64
PRPF8-211ENST00000574728 MOCS3O95396 460 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 SEMA4FO95754 770 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 FSHBP01225 129 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 SERPINF2P08697 491 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 NR2F6P10588 404 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 CD59P13987 128 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 ZFXP17010 805 aaPredicted RBP4.78□□□□□ -1.64
PRPF8-211ENST00000574728 ERCC2P18074 760 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 EPHB2P29323 1055 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 UQCRC1P31930 480 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 GKP32189 559 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 CHRNA3P32297 505 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 HTR7P34969 479 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 PSMD8P48556 350 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 ALDH9A1P49189 494 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 CCR5P51681 352 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 CLCN2P51788 898 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 PGDP52209 483 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 ADPRHP54922 357 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 TPM4P67936 248 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 ARHGAP8P85298 464 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 SLC20A2Q08357 652 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 FOXI1Q12951 378 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 BYSLQ13895 437 aaKnown RBP4.78□□□□□ -1.64
PRPF8-211ENST00000574728 TRIM14Q14142 442 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 FHL2Q14192 279 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 E2F5Q15329 346 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 SHBQ15464 509 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 TAZQ16635 292 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 PARP15Q460N3 678 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 TDRD12Q587J7 1177 aaKnown RBP4.78□□□□□ -1.64
PRPF8-211ENST00000574728 ERMARDQ5T6L9 678 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 LCE1DQ5T752 114 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 STPG1Q5TH74 334 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 SLC9A4Q6AI14 798 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 RWDD4Q6NW29 188 aaKnown RBP4.78□□□□□ -1.64
PRPF8-211ENST00000574728 SCYL2Q6P3W7 929 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 C22orf39Q6P5X5 142 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 NCEH1Q6PIU2 408 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 CRTC1Q6UUV9 634 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 LEKR1Q6ZMV7 388 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 Q6ZPA2 131 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 KRT73Q86Y46 540 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 MYLK4Q86YV6 388 aaPredicted RBP4.78□□□□□ -1.64
PRPF8-211ENST00000574728 PCDH20Q8N6Y1 951 aaKnown RBP4.78□□□□□ -1.64
PRPF8-211ENST00000574728 PQLC3Q8N755 202 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 TEKT4Q8WW24 435 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 PIGKQ92643 395 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 RFKQ969G6 155 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 BIRC7Q96CA5 298 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 FAF2Q96CS3 445 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 CSPG4P5Q96PW8 444 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 EIF3CQ99613 913 aaKnown RBP4.78□□□□□ -1.64
PRPF8-211ENST00000574728 SLC39A8Q9C0K1 460 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 IL21RQ9HBE5 538 aa4.78□□□□□ -1.64
PRPF8-211ENST00000574728 SGK2Q9HBY8 427 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms