RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895		H3BMM5	538 aa		14	□□□□□ -0.17
ABR-223	ENST00000573895	PRMT5	O14744	637 aa	Predicted RBP	14	□□□□□ -0.17
ABR-223	ENST00000573895	FAM155B	O75949	473 aa		14	□□□□□ -0.17
ABR-223	ENST00000573895	ESR1	P03372	595 aa		14	□□□□□ -0.17
ABR-223	ENST00000573895	SLC35G4	P0C7Q5	338 aa		14	□□□□□ -0.17
ABR-223	ENST00000573895	KRT15	P19012	456 aa		14	□□□□□ -0.17
ABR-223	ENST00000573895	RPS3	P23396	243 aa	Known RBP eCLIP	14	□□□□□ -0.17
ABR-223	ENST00000573895	NDUFS1	P28331	727 aa		14	□□□□□ -0.17
ABR-223	ENST00000573895	PBLD	P30039	288 aa	Predicted RBP	14	□□□□□ -0.17
ABR-223	ENST00000573895	MAPK9	P45984	424 aa		14	□□□□□ -0.17
ABR-223	ENST00000573895	CDKN1C	P49918	316 aa	Predicted RBP	14	□□□□□ -0.17
ABR-223	ENST00000573895	MPP1	Q00013	466 aa		14	□□□□□ -0.17
ABR-223	ENST00000573895	MC2R	Q01718	297 aa		14	□□□□□ -0.17
ABR-223	ENST00000573895	POU4F1	Q01851	419 aa		14	□□□□□ -0.17
ABR-223	ENST00000573895	DBN1	Q16643	649 aa		14	□□□□□ -0.17
ABR-223	ENST00000573895	ZNF658B	Q4V348	819 aa	Predicted RBP	14	□□□□□ -0.17
ABR-223	ENST00000573895	TNFAIP8L3	Q5GJ75	292 aa		14	□□□□□ -0.17
ABR-223	ENST00000573895	CAPRIN2	Q6IMN6	1127 aa	Known RBP	14	□□□□□ -0.17
ABR-223	ENST00000573895	XKR5	Q6UX68	686 aa		14	□□□□□ -0.17
ABR-223	ENST00000573895	GPR155	Q7Z3F1	870 aa		14	□□□□□ -0.17
ABR-223	ENST00000573895	CCDC91	Q7Z6B0	441 aa		14	□□□□□ -0.17
ABR-223	ENST00000573895	DTX1	Q86Y01	620 aa		14	□□□□□ -0.17
ABR-223	ENST00000573895	CFAP206	Q8IYR0	622 aa		14	□□□□□ -0.17
ABR-223	ENST00000573895	LPGAT1	Q92604	370 aa		14	□□□□□ -0.17
ABR-223	ENST00000573895	ZDHHC12	Q96GR4	267 aa		14	□□□□□ -0.17
ABR-223	ENST00000573895	CRELD1	Q96HD1	420 aa		14	□□□□□ -0.17
ABR-223	ENST00000573895	VPS39	Q96JC1	886 aa		14	□□□□□ -0.17
ABR-223	ENST00000573895	INSM2	Q96T92	566 aa	Predicted RBP	14	□□□□□ -0.17
ABR-223	ENST00000573895	GPR22	Q99680	433 aa		14	□□□□□ -0.17
ABR-223	ENST00000573895	ZPBP	Q9BS86	351 aa		14	□□□□□ -0.17
ABR-223	ENST00000573895	CCDC68	Q9H2F9	335 aa		14	□□□□□ -0.17
ABR-223	ENST00000573895	CENPH	Q9H3R5	247 aa		14	□□□□□ -0.17
ABR-223	ENST00000573895	FBXO6	Q9NRD1	293 aa	Predicted RBP	14	□□□□□ -0.17
ABR-223	ENST00000573895	SLC39A1	Q9NY26	324 aa		14	□□□□□ -0.17
ABR-223	ENST00000573895	SENP1	Q9P0U3	644 aa		14	□□□□□ -0.17
ABR-223	ENST00000573895	TBK1	Q9UHD2	729 aa		14	□□□□□ -0.17
ABR-223	ENST00000573895	PSMD13	Q9UNM6	376 aa		14	□□□□□ -0.17
ABR-223	ENST00000573895	VWA7	Q9Y334	891 aa		14	□□□□□ -0.17
ABR-223	ENST00000573895	COLEC10	Q9Y6Z7	277 aa		14	□□□□□ -0.17
ABR-223	ENST00000573895	EFCAB7	A8K855	629 aa		13.99	□□□□□ -0.17
ABR-223	ENST00000573895	HMGB1P1	B2RPK0	211 aa	Predicted RBP	13.99	□□□□□ -0.17
ABR-223	ENST00000573895	STMND1	H3BQB6	276 aa		13.99	□□□□□ -0.17
ABR-223	ENST00000573895	CAPN5	O15484	640 aa	Predicted RBP	13.99	□□□□□ -0.17
ABR-223	ENST00000573895	MT-ND3	P03897	115 aa		13.99	□□□□□ -0.17
ABR-223	ENST00000573895	TYRP1	P17643	537 aa		13.99	□□□□□ -0.17
ABR-223	ENST00000573895	CD9	P21926	228 aa		13.99	□□□□□ -0.17
ABR-223	ENST00000573895	PLOD1	Q02809	727 aa	Predicted RBP	13.99	□□□□□ -0.17
ABR-223	ENST00000573895	VAC14	Q08AM6	782 aa		13.99	□□□□□ -0.17
ABR-223	ENST00000573895	TMED2	Q15363	201 aa		13.99	□□□□□ -0.17
ABR-223	ENST00000573895	DCAF12	Q5T6F0	453 aa		13.99	□□□□□ -0.17
ABR-223	ENST00000573895	MROH9	Q5TGP6	573 aa		13.99	□□□□□ -0.17
ABR-223	ENST00000573895	FAM45BP	Q6NSW5	357 aa		13.99	□□□□□ -0.17
ABR-223	ENST00000573895	CNST	Q6PJW8	725 aa		13.99	□□□□□ -0.17
ABR-223	ENST00000573895	PRSS42	Q7Z5A4	293 aa		13.99	□□□□□ -0.17
ABR-223	ENST00000573895	LDB1	Q86U70	411 aa	Predicted RBP	13.99	□□□□□ -0.17
ABR-223	ENST00000573895	LSM14A	Q8ND56	463 aa	Known RBP	13.99	□□□□□ -0.17
ABR-223	ENST00000573895	FAM45A	Q8TCE6	357 aa		13.99	□□□□□ -0.17
ABR-223	ENST00000573895	ACMSD	Q8TDX5	336 aa		13.99	□□□□□ -0.17
ABR-223	ENST00000573895	TSPAN17	Q96FV3	270 aa		13.99	□□□□□ -0.17
ABR-223	ENST00000573895	C12orf66	Q96MD2	445 aa		13.99	□□□□□ -0.17
ABR-223	ENST00000573895	CCNL2	Q96S94	520 aa	Predicted RBP	13.99	□□□□□ -0.17
ABR-223	ENST00000573895	WWP1	Q9H0M0	922 aa		13.99	□□□□□ -0.17
ABR-223	ENST00000573895	P2RY12	Q9H244	342 aa		13.99	□□□□□ -0.17
ABR-223	ENST00000573895	ZNF768	Q9H5H4	540 aa	Known RBP	13.99	□□□□□ -0.17
ABR-223	ENST00000573895	COG4	Q9H9E3	785 aa		13.99	□□□□□ -0.17
ABR-223	ENST00000573895	IMP3	Q9NV31	184 aa	Known RBP	13.99	□□□□□ -0.17
ABR-223	ENST00000573895	OCIAD1	Q9NX40	245 aa		13.99	□□□□□ -0.17
ABR-223	ENST00000573895	FOXJ2	Q9P0K8	574 aa		13.99	□□□□□ -0.17
ABR-223	ENST00000573895	SEMA5B	Q9P283	1151 aa		13.99	□□□□□ -0.17
ABR-223	ENST00000573895	SLC17A6	Q9P2U8	582 aa		13.99	□□□□□ -0.17
ABR-223	ENST00000573895	CRYL1	Q9Y2S2	319 aa		13.99	□□□□□ -0.17
ABR-223	ENST00000573895	MTO1	Q9Y2Z2	717 aa	Known RBP	13.99	□□□□□ -0.17
ABR-223	ENST00000573895	PCDHB11	Q9Y5F2	797 aa		13.99	□□□□□ -0.17
ABR-223	ENST00000573895	ACTL7B	Q9Y614	415 aa		13.99	□□□□□ -0.17
ABR-223	ENST00000573895	UBA6	A0AVT1	1052 aa	Predicted RBP	13.98	□□□□□ -0.17
ABR-223	ENST00000573895	HMX2	A2RU54	273 aa		13.98	□□□□□ -0.17
ABR-223	ENST00000573895	TRIM49D1	C9J1S8	452 aa		13.98	□□□□□ -0.17
ABR-223	ENST00000573895		K7ENP7	123 aa		13.98	□□□□□ -0.17
ABR-223	ENST00000573895	LIN7A	O14910	233 aa	Predicted RBP	13.98	□□□□□ -0.17
ABR-223	ENST00000573895	SYF2	O95926	243 aa	Known RBP	13.98	□□□□□ -0.17
ABR-223	ENST00000573895	FTH1	P02794	183 aa		13.98	□□□□□ -0.17
ABR-223	ENST00000573895	PRSS56	P0CW18	603 aa		13.98	□□□□□ -0.17
ABR-223	ENST00000573895	PKM	P14618	531 aa	Known RBP	13.98	□□□□□ -0.17
ABR-223	ENST00000573895	CRABP2	P29373	138 aa		13.98	□□□□□ -0.17
ABR-223	ENST00000573895	SKIV2L2	P42285	1042 aa	Known RBP	13.98	□□□□□ -0.17
ABR-223	ENST00000573895	SLC12A2	P55011	1212 aa		13.98	□□□□□ -0.17
ABR-223	ENST00000573895	GFER	P55789	205 aa		13.98	□□□□□ -0.17
ABR-223	ENST00000573895	CXADR	P78310	365 aa		13.98	□□□□□ -0.17
ABR-223	ENST00000573895	SNAP47	Q5SQN1	464 aa		13.98	□□□□□ -0.17
ABR-223	ENST00000573895	UGT3A1	Q6NUS8	523 aa		13.98	□□□□□ -0.17
ABR-223	ENST00000573895	INO80C	Q6PI98	192 aa	Predicted RBP	13.98	□□□□□ -0.17
ABR-223	ENST00000573895	CEACAM20	Q6UY09	585 aa		13.98	□□□□□ -0.17
ABR-223	ENST00000573895	TRABD2A	Q86V40	505 aa		13.98	□□□□□ -0.17
ABR-223	ENST00000573895	FAM129C	Q86XR2	697 aa		13.98	□□□□□ -0.17
ABR-223	ENST00000573895	CYP4X1	Q8N118	509 aa		13.98	□□□□□ -0.17
ABR-223	ENST00000573895	CLDN19	Q8N6F1	224 aa		13.98	□□□□□ -0.17
ABR-223	ENST00000573895	MZB1	Q8WU39	189 aa		13.98	□□□□□ -0.17
ABR-223	ENST00000573895	RSC1A1	Q92681	617 aa		13.98	□□□□□ -0.17
ABR-223	ENST00000573895	ALKBH8	Q96BT7	664 aa	Known RBP	13.98	□□□□□ -0.17
ABR-223	ENST00000573895	CABS1	Q96KC9	395 aa		13.98	□□□□□ -0.17

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