RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 KLHL3Q9UH77 587 aa13.15□□□□□ -0.3
RPAIN-213ENST00000573577 URB1O60287 2271 aaKnown RBP13.15□□□□□ -0.3
RPAIN-213ENST00000573577 CFAP47Q6ZTR5 3102 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 A0A087WUV0 522 aaPredicted RBP13.14□□□□□ -0.31
RPAIN-213ENST00000573577 C2orf72A6NCS6 295 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 A8MU76 341 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 MATN2O00339 956 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 CAPN5O15484 640 aaPredicted RBP13.14□□□□□ -0.31
RPAIN-213ENST00000573577 PRAMEF10O60809 474 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 MATN4O95460 622 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 C9P02748 559 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 ANKRD34CP0C6C1 535 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 MPC1LP0DKB6 136 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 FGF3P11487 239 aaPredicted RBP13.14□□□□□ -0.31
RPAIN-213ENST00000573577 FDXRP22570 491 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 ITPKBP27987 946 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 SHMT2P34897 504 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 PMS2P54278 862 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 CDKN2DP55273 166 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 GFERP55789 205 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 POU4F1Q01851 419 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 PRKG2Q13237 762 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 COL28A1Q2UY09 1125 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 ACSBG2Q5FVE4 666 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 FAM129CQ86XR2 697 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 SPACA3Q8IXA5 215 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 OR52E1Q8NGJ3 308 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 GIMAP7Q8NHV1 300 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 JPH3Q8WXH2 748 aaPredicted RBP13.14□□□□□ -0.31
RPAIN-213ENST00000573577 USP7Q93009 1102 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 RAD51AP1Q96B01 352 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 TSPAN17Q96FV3 270 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 ZDHHC12Q96GR4 267 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 TGM7Q96PF1 710 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 RAB11FIP5Q9BXF6 653 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 DPH1Q9BZG8 443 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 B3GNT4Q9C0J1 378 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 RAB33BQ9H082 229 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 ANKZF1Q9H8Y5 726 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 EPHA6Q9UF33 1036 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 ACSL6Q9UKU0 697 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 TDRKHQ9Y2W6 561 aaKnown RBP13.14□□□□□ -0.31
RPAIN-213ENST00000573577 IKBKGQ9Y6K9 419 aa13.14□□□□□ -0.31
RPAIN-213ENST00000573577 ITPR1Q14643 2758 aa13.13□□□□□ -0.31
RPAIN-213ENST00000573577 OR5K3A6NET4 321 aa13.13□□□□□ -0.31
RPAIN-213ENST00000573577 EFCAB7A8K855 629 aa13.13□□□□□ -0.31
RPAIN-213ENST00000573577 B4E171 279 aa13.13□□□□□ -0.31
RPAIN-213ENST00000573577 C9orf172C9J069 976 aa13.13□□□□□ -0.31
RPAIN-213ENST00000573577 TOX3O15405 576 aaPredicted RBP13.13□□□□□ -0.31
RPAIN-213ENST00000573577 PIAS1O75925 651 aa13.13□□□□□ -0.31
RPAIN-213ENST00000573577 C1QAP02745 245 aa13.13□□□□□ -0.31
RPAIN-213ENST00000573577 CATP04040 527 aaKnown RBP13.13□□□□□ -0.31
RPAIN-213ENST00000573577 ABHD2P08910 425 aa13.13□□□□□ -0.31
RPAIN-213ENST00000573577 SAT1P21673 171 aa13.13□□□□□ -0.31
RPAIN-213ENST00000573577 MAP4P27816 1152 aaKnown RBP13.13□□□□□ -0.31
RPAIN-213ENST00000573577 TSPAN7P41732 249 aa13.13□□□□□ -0.31
RPAIN-213ENST00000573577 IL2P60568 153 aa13.13□□□□□ -0.31
RPAIN-213ENST00000573577 TLE3Q04726 772 aa13.13□□□□□ -0.31
RPAIN-213ENST00000573577 TMEM164Q5U3C3 297 aa13.13□□□□□ -0.31
RPAIN-213ENST00000573577 PAQR3Q6TCH7 311 aa13.13□□□□□ -0.31
RPAIN-213ENST00000573577 AMIGO1Q86WK6 493 aa13.13□□□□□ -0.31
RPAIN-213ENST00000573577 CPNE9Q8IYJ1 553 aa13.13□□□□□ -0.31
RPAIN-213ENST00000573577 MYO1HQ8N1T3 1032 aa13.13□□□□□ -0.31
RPAIN-213ENST00000573577 OR4E2Q8NGC2 313 aa13.13□□□□□ -0.31
RPAIN-213ENST00000573577 TAAR9Q96RI9 348 aa13.13□□□□□ -0.31
RPAIN-213ENST00000573577 GPR22Q99680 433 aa13.13□□□□□ -0.31
RPAIN-213ENST00000573577 SLC30A3Q99726 388 aa13.13□□□□□ -0.31
RPAIN-213ENST00000573577 MCMBPQ9BTE3 642 aa13.13□□□□□ -0.31
RPAIN-213ENST00000573577 POPDC3Q9HBV1 291 aa13.13□□□□□ -0.31
RPAIN-213ENST00000573577 SYTL2Q9HCH5 934 aa13.13□□□□□ -0.31
RPAIN-213ENST00000573577 HRASLS2Q9NWW9 162 aa13.13□□□□□ -0.31
RPAIN-213ENST00000573577 OCIAD1Q9NX40 245 aa13.13□□□□□ -0.31
RPAIN-213ENST00000573577 OR6C2Q9NZP2 312 aa13.13□□□□□ -0.31
RPAIN-213ENST00000573577 FOXJ2Q9P0K8 574 aa13.13□□□□□ -0.31
RPAIN-213ENST00000573577 TSR3Q9UJK0 312 aaKnown RBP13.13□□□□□ -0.31
RPAIN-213ENST00000573577 SLC39A10Q9ULF5 831 aa13.13□□□□□ -0.31
RPAIN-213ENST00000573577 OR6C74A6NCV1 312 aa13.12□□□□□ -0.31
RPAIN-213ENST00000573577 PABPN1LA6NDY0 278 aaKnown RBP13.12□□□□□ -0.31
RPAIN-213ENST00000573577 KLK10O43240 276 aa13.12□□□□□ -0.31
RPAIN-213ENST00000573577 ZBTB14O43829 449 aa13.12□□□□□ -0.31
RPAIN-213ENST00000573577 PSIP1O75475 530 aaKnown RBP13.12□□□□□ -0.31
RPAIN-213ENST00000573577 C1orf105O95561 183 aa13.12□□□□□ -0.31
RPAIN-213ENST00000573577 C8GP07360 202 aa13.12□□□□□ -0.31
RPAIN-213ENST00000573577 TUBBP07437 444 aa13.12□□□□□ -0.31
RPAIN-213ENST00000573577 INHBAP08476 426 aa13.12□□□□□ -0.31
RPAIN-213ENST00000573577 FAM153BP0C7A2 387 aa13.12□□□□□ -0.31
RPAIN-213ENST00000573577 RAB28P51157 221 aa13.12□□□□□ -0.31
RPAIN-213ENST00000573577 RAB15P59190 212 aa13.12□□□□□ -0.31
RPAIN-213ENST00000573577 TIAL1Q01085 375 aaKnown RBP eCLIP13.12□□□□□ -0.312e-6■■■■□ 23
RPAIN-213ENST00000573577 SP140Q13342 867 aa13.12□□□□□ -0.31
RPAIN-213ENST00000573577 USP10Q14694 798 aaKnown RBP13.12□□□□□ -0.31
RPAIN-213ENST00000573577 FAM153CQ494X1 144 aa13.12□□□□□ -0.31
RPAIN-213ENST00000573577 IRGCQ6NXR0 463 aa13.12□□□□□ -0.31
RPAIN-213ENST00000573577 TAOK1Q7L7X3 1001 aa13.12□□□□□ -0.31
RPAIN-213ENST00000573577 PRSS42Q7Z5A4 293 aa13.12□□□□□ -0.31
RPAIN-213ENST00000573577 CNPY4Q8N129 248 aa13.12□□□□□ -0.31
RPAIN-213ENST00000573577 NKAPQ8N5F7 415 aaKnown RBP13.12□□□□□ -0.31
RPAIN-213ENST00000573577 BMPERQ8N8U9 685 aa13.12□□□□□ -0.31
RPAIN-213ENST00000573577 CD180Q99467 661 aa13.12□□□□□ -0.31
RPAIN-213ENST00000573577 OLFM1Q99784 485 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms