RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 TRIT1Q9H3H1 467 aaKnown RBP7.24□□□□□ -1.25
NUP88-205ENST00000572809 ZNF768Q9H5H4 540 aaKnown RBP7.24□□□□□ -1.25
NUP88-205ENST00000572809 KIR3DX1Q9H7L2 352 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 VPS37BQ9H9H4 285 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 CASS4Q9NQ75 786 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 HOMER3Q9NSC5 361 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 PCMTD2Q9NV79 361 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 SEMA5BQ9P283 1151 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 SLC24A2Q9UI40 661 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 ANAPC5Q9UJX4 755 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 RIMKLBQ9ULI2 386 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 TMEM184BQ9Y519 407 aaPredicted RBP7.24□□□□□ -1.25
NUP88-205ENST00000572809 HEBP2Q9Y5Z4 205 aa7.24□□□□□ -1.25
NUP88-205ENST00000572809 IGHV5-51A0A0C4DH38 117 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 LOC101059948A0A1B0GTJ6 334 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 FAM221AA4D161 298 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 OR6C74A6NCV1 312 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 OR5K3A6NET4 321 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 OR51F1A6NGY5 319 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 AP3B1O00203 1094 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 QSOX1O00391 747 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 IFRD1O00458 451 aaPredicted RBP7.23□□□□□ -1.25
NUP88-205ENST00000572809 GOT2P00505 430 aaKnown RBP7.23□□□□□ -1.25
NUP88-205ENST00000572809 GSTP1P09211 210 aaKnown RBP7.23□□□□□ -1.25
NUP88-205ENST00000572809 GSTM1P09488 218 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 OR56A5P0C7T3 313 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 LIFP15018 202 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 WT1P19544 449 aaPredicted RBP7.23□□□□□ -1.25
NUP88-205ENST00000572809 PDHA2P29803 388 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 FOXN2P32314 431 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 PPARGP37231 505 aaPredicted RBP7.23□□□□□ -1.25
NUP88-205ENST00000572809 KCNJ1P48048 391 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 CD151P48509 253 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 NPY2RP49146 381 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 PPP1CAP62136 330 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 CYP4F2P78329 520 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 ABHD18Q0P651 414 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 RPA4Q13156 261 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 ZNF658BQ4V348 819 aaPredicted RBP7.23□□□□□ -1.25
NUP88-205ENST00000572809 FASTKD1Q53R41 847 aaKnown RBP7.23□□□□□ -1.25
NUP88-205ENST00000572809 PCID2Q5JVF3 399 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 DNTTIP2Q5QJE6 756 aaKnown RBP7.23□□□□□ -1.25
NUP88-205ENST00000572809 TSTD2Q5T7W7 516 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 ARMC6Q6NXE6 501 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 DUS1LQ6P1R4 473 aaKnown RBP7.23□□□□□ -1.25
NUP88-205ENST00000572809 CYB5D1Q6P9G0 228 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 CERS6Q6ZMG9 384 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 OOSP2Q86WS3 158 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 RASGRP3Q8IV61 690 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 SIDT2Q8NBJ9 832 aaKnown RBP7.23□□□□□ -1.25
NUP88-205ENST00000572809 ACVR1CQ8NER5 493 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 OR13J1Q8NGT2 312 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 OR6P1Q8NGX9 317 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 OR4L1Q8NH43 312 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 TFGQ92734 400 aaPredicted RBP7.23□□□□□ -1.25
NUP88-205ENST00000572809 EXTL1Q92935 676 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 PEX13Q92968 403 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.23□□□□□ -1.25
NUP88-205ENST00000572809 SGSM3Q96HU1 749 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 ELMO2Q96JJ3 720 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 RMDN2Q96LZ7 410 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 ZNF778Q96MU6 729 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 CD180Q99467 661 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 MAP3K3Q99759 626 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 EFHD1Q9BUP0 239 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 SLC12A9Q9BXP2 914 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 KRTAP4-7Q9BYR0 210 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 OR52A5Q9H2C5 316 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 COG4Q9H9E3 785 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 PDE7BQ9NP56 450 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 CHRAC1Q9NRG0 131 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 SIDT1Q9NXL6 827 aaKnown RBP7.23□□□□□ -1.25
NUP88-205ENST00000572809 SLC2A6Q9UGQ3 507 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 JRKLQ9Y4A0 524 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 PRSS21Q9Y6M0 314 aa7.23□□□□□ -1.25
NUP88-205ENST00000572809 SDK2Q58EX2 2172 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 ZNF106Q9H2Y7 1883 aaKnown RBP7.22□□□□□ -1.25
NUP88-205ENST00000572809 BPTFQ12830 3046 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 F8W8V4 182 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 LIN7AO14910 233 aaPredicted RBP7.22□□□□□ -1.25
NUP88-205ENST00000572809 SPAG6O75602 509 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 C1QL1O75973 258 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 KIAA0754O94854 1291 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 DLGAP3O95886 979 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 FTH1P02794 183 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 FGF5P12034 268 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 FOLR1P15328 257 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 ZNF28P17035 718 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 POLR2CP19387 275 aaPredicted RBP7.22□□□□□ -1.25
NUP88-205ENST00000572809 ARCN1P48444 511 aaKnown RBP7.22□□□□□ -1.25
NUP88-205ENST00000572809 SESN2P58004 480 aaPredicted RBP7.22□□□□□ -1.25
NUP88-205ENST00000572809 PRAMEP78395 509 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 HSD11B2P80365 405 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 BASP1P80723 227 aaKnown RBP7.22□□□□□ -1.25
NUP88-205ENST00000572809 PLOD1Q02809 727 aaPredicted RBP7.22□□□□□ -1.25
NUP88-205ENST00000572809 ACY1Q03154 408 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 ACVR1Q04771 509 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 PRKAA1Q13131 559 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 PRKG2Q13237 762 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 MAP7Q14244 749 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms