RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 PKLRP30613 574 aa17.46■□□□□ 0.39
CHD3-214ENST00000572579 GCGRP47871 477 aa17.46■□□□□ 0.39
CHD3-214ENST00000572579 SESN2P58004 480 aaPredicted RBP17.46■□□□□ 0.39
CHD3-214ENST00000572579 HSPA14Q0VDF9 509 aa17.46■□□□□ 0.39
CHD3-214ENST00000572579 UBAP2LQ14157 1087 aaKnown RBP17.46■□□□□ 0.39
CHD3-214ENST00000572579 RPS6KA1Q15418 735 aa17.46■□□□□ 0.39
CHD3-214ENST00000572579 CCNG2Q16589 344 aa17.46■□□□□ 0.39
CHD3-214ENST00000572579 KYNUQ16719 465 aa17.46■□□□□ 0.39
CHD3-214ENST00000572579 C1orf189Q5VU69 101 aa17.46■□□□□ 0.39
CHD3-214ENST00000572579 LYPLAL1Q5VWZ2 237 aa17.46■□□□□ 0.39
CHD3-214ENST00000572579 TXLNBQ8N3L3 684 aa17.46■□□□□ 0.39
CHD3-214ENST00000572579 FDCSPQ8NFU4 85 aa17.46■□□□□ 0.39
CHD3-214ENST00000572579 SEC14L1Q92503 715 aa17.46■□□□□ 0.39
CHD3-214ENST00000572579 CARD6Q9BX69 1037 aa17.46■□□□□ 0.39
CHD3-214ENST00000572579 P2RY12Q9H244 342 aa17.46■□□□□ 0.39
CHD3-214ENST00000572579 PAK5Q9P286 719 aa17.46■□□□□ 0.39
CHD3-214ENST00000572579 DRG1Q9Y295 367 aaKnown RBP17.46■□□□□ 0.39
CHD3-214ENST00000572579 PCDHGA9Q9Y5G4 932 aaKnown RBP17.46■□□□□ 0.39
CHD3-214ENST00000572579 A0A0J9YY10 115 aa17.45■□□□□ 0.38
CHD3-214ENST00000572579 E7EVH7 732 aa17.45■□□□□ 0.38
CHD3-214ENST00000572579 QSOX1O00391 747 aa17.45■□□□□ 0.38
CHD3-214ENST00000572579 TMEM63AO94886 807 aa17.45■□□□□ 0.38
CHD3-214ENST00000572579 SLCO2B1O94956 709 aa17.45■□□□□ 0.38
CHD3-214ENST00000572579 PLOD1Q02809 727 aaPredicted RBP17.45■□□□□ 0.38
CHD3-214ENST00000572579 ATP1A4Q13733 1029 aa17.45■□□□□ 0.38
CHD3-214ENST00000572579 CCSMST1Q4G0I0 132 aa17.45■□□□□ 0.38
CHD3-214ENST00000572579 DNAJC21Q5F1R6 531 aaKnown RBP17.45■□□□□ 0.38
CHD3-214ENST00000572579 DRICH1Q6PGQ1 229 aaPredicted RBP17.45■□□□□ 0.38
CHD3-214ENST00000572579 CES3Q6UWW8 571 aa17.45■□□□□ 0.38
CHD3-214ENST00000572579 ZNF655Q8N720 491 aaPredicted RBP17.45■□□□□ 0.38
CHD3-214ENST00000572579 SLC25A23Q9BV35 468 aa17.45■□□□□ 0.38
CHD3-214ENST00000572579 NUDT9Q9BW91 350 aa17.45■□□□□ 0.38
CHD3-214ENST00000572579 TSGA10Q9BZW7 698 aa17.45■□□□□ 0.38
CHD3-214ENST00000572579 ACSS2Q9NR19 701 aa17.45■□□□□ 0.38
CHD3-214ENST00000572579 DHCR7Q9UBM7 475 aaKnown RBP17.45■□□□□ 0.38
CHD3-214ENST00000572579 ZNF185O15231 689 aa17.44■□□□□ 0.38
CHD3-214ENST00000572579 PRICKLE3O43900 615 aaPredicted RBP17.44■□□□□ 0.38
CHD3-214ENST00000572579 OR2B3O76000 313 aa17.44■□□□□ 0.38
CHD3-214ENST00000572579 ATXN8OSP0DMR3 200 aa17.44■□□□□ 0.38
CHD3-214ENST00000572579 KIR2DS3Q14952 304 aa17.44■□□□□ 0.38
CHD3-214ENST00000572579 SLC5A12Q1EHB4 618 aa17.44■□□□□ 0.38
CHD3-214ENST00000572579 SYTL3Q4VX76 610 aa17.44■□□□□ 0.38
CHD3-214ENST00000572579 FASTKD1Q53R41 847 aaKnown RBP17.44■□□□□ 0.38
CHD3-214ENST00000572579 PCID2Q5JVF3 399 aa17.44■□□□□ 0.38
CHD3-214ENST00000572579 RHBDD2Q6NTF9 364 aa17.44■□□□□ 0.38
CHD3-214ENST00000572579 NLRP9Q7RTR0 991 aa17.44■□□□□ 0.38
CHD3-214ENST00000572579 CCDC89Q8N998 374 aa17.44■□□□□ 0.38
CHD3-214ENST00000572579 Q8NA96 180 aa17.44■□□□□ 0.38
CHD3-214ENST00000572579 CFAP61Q8NHU2 1237 aa17.44■□□□□ 0.38
CHD3-214ENST00000572579 PEX13Q92968 403 aa17.44■□□□□ 0.38
CHD3-214ENST00000572579 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.44■□□□□ 0.38
CHD3-214ENST00000572579 NAV2Q8IVL1 2488 aa17.44■□□□□ 0.38
CHD3-214ENST00000572579 TNRC6AQ8NDV7 1962 aaKnown RBP17.43■□□□□ 0.38
CHD3-214ENST00000572579 A6NL46 340 aa17.43■□□□□ 0.38
CHD3-214ENST00000572579 ISM1B1AKI9 464 aa17.43■□□□□ 0.38
CHD3-214ENST00000572579 CD3EAPO15446 510 aaKnown RBP17.43■□□□□ 0.38
CHD3-214ENST00000572579 KRT86O43790 486 aa17.43■□□□□ 0.38
CHD3-214ENST00000572579 SORBS2O94875 1100 aaKnown RBP17.43■□□□□ 0.38
CHD3-214ENST00000572579 GAS8O95995 478 aa17.43■□□□□ 0.38
CHD3-214ENST00000572579 MAGP20916 626 aa17.43■□□□□ 0.38
CHD3-214ENST00000572579 UQCRFS1P47985 274 aa17.43■□□□□ 0.38
CHD3-214ENST00000572579 RAB28P51157 221 aa17.43■□□□□ 0.38
CHD3-214ENST00000572579 PGDP52209 483 aa17.43■□□□□ 0.38
CHD3-214ENST00000572579 PRAMEP78395 509 aa17.43■□□□□ 0.38
CHD3-214ENST00000572579 SLC9A5Q14940 896 aa17.43■□□□□ 0.38
CHD3-214ENST00000572579 CTSL3PQ5NE16 218 aa17.43■□□□□ 0.38
CHD3-214ENST00000572579 FCRL6Q6DN72 434 aa17.43■□□□□ 0.38
CHD3-214ENST00000572579 ZNF662Q6ZS27 426 aa17.43■□□□□ 0.38
CHD3-214ENST00000572579 RBMXL3Q8N7X1 1067 aaKnown RBP17.43■□□□□ 0.38
CHD3-214ENST00000572579 MFSD3Q96ES6 412 aa17.43■□□□□ 0.38
CHD3-214ENST00000572579 DPH2Q9BQC3 489 aaPredicted RBP17.43■□□□□ 0.38
CHD3-214ENST00000572579 LZTFL1Q9NQ48 299 aa17.43■□□□□ 0.38
CHD3-214ENST00000572579 EIF2B3Q9NR50 452 aaKnown RBP17.43■□□□□ 0.38
CHD3-214ENST00000572579 CATSPERZQ9NTU4 200 aa17.43■□□□□ 0.38
CHD3-214ENST00000572579 ANKMY1Q9P2S6 941 aa17.43■□□□□ 0.38
CHD3-214ENST00000572579 RUVBL2Q9Y230 463 aaKnown RBP17.43■□□□□ 0.38
CHD3-214ENST00000572579 NFS1Q9Y697 457 aa17.43■□□□□ 0.38
CHD3-214ENST00000572579 USP9YO00507 2555 aaPredicted RBP17.42■□□□□ 0.38
CHD3-214ENST00000572579 GOLGA8KD6RF30 607 aa17.42■□□□□ 0.38
CHD3-214ENST00000572579 GOLGA8TH3BQL2 631 aa17.42■□□□□ 0.38
CHD3-214ENST00000572579 PRMT5O14744 637 aaPredicted RBP17.42■□□□□ 0.38
CHD3-214ENST00000572579 ZSCAN9O15535 394 aaPredicted RBP17.42■□□□□ 0.38
CHD3-214ENST00000572579 NRP2O60462 931 aa17.42■□□□□ 0.38
CHD3-214ENST00000572579 FGGP02679 453 aa17.42■□□□□ 0.38
CHD3-214ENST00000572579 UMODP07911 640 aa17.42■□□□□ 0.38
CHD3-214ENST00000572579 CD9P21926 228 aa17.42■□□□□ 0.38
CHD3-214ENST00000572579 MGAT1P26572 445 aa17.42■□□□□ 0.38
CHD3-214ENST00000572579 GRIA3P42263 894 aa17.42■□□□□ 0.38
CHD3-214ENST00000572579 YBX1P67809 324 aaKnown RBP17.42■□□□□ 0.38
CHD3-214ENST00000572579 PRR30Q53SZ7 412 aaPredicted RBP17.42■□□□□ 0.38
CHD3-214ENST00000572579 MLIPQ5VWP3 458 aa17.42■□□□□ 0.38
CHD3-214ENST00000572579 MRPL14Q6P1L8 145 aaKnown RBP17.42■□□□□ 0.38
CHD3-214ENST00000572579 TAX1BP1Q86VP1 789 aa17.42■□□□□ 0.38
CHD3-214ENST00000572579 MCATQ8IVS2 390 aaKnown RBP17.42■□□□□ 0.38
CHD3-214ENST00000572579 GPR135Q8IZ08 494 aa17.42■□□□□ 0.38
CHD3-214ENST00000572579 DTWD1Q8N5C7 304 aa17.42■□□□□ 0.38
CHD3-214ENST00000572579 PRELID2Q8N945 189 aa17.42■□□□□ 0.38
CHD3-214ENST00000572579 PPHLN1Q8NEY8 458 aaKnown RBP17.42■□□□□ 0.38
CHD3-214ENST00000572579 ASZ1Q8WWH4 475 aa17.42■□□□□ 0.38
CHD3-214ENST00000572579 COL26A1Q96A83 441 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms