RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 ANKHQ9HCJ1 492 aa10.53□□□□□ -0.72
CCDC40-207ENST00000572253 ASIC5Q9NY37 505 aa10.53□□□□□ -0.72
CCDC40-207ENST00000572253 ERVW-1Q9UQF0 538 aa10.53□□□□□ -0.72
CCDC40-207ENST00000572253 OARD1Q9Y530 152 aa10.53□□□□□ -0.72
CCDC40-207ENST00000572253 PABPN1LA6NDY0 278 aaKnown RBP10.53□□□□□ -0.72
CCDC40-207ENST00000572253 TTC36A6NLP5 189 aa10.53□□□□□ -0.72
CCDC40-207ENST00000572253 EBLN1P0CF75 366 aa10.53□□□□□ -0.72
CCDC40-207ENST00000572253 ITGALP20701 1170 aa10.53□□□□□ -0.72
CCDC40-207ENST00000572253 ATP5C1P36542 298 aaKnown RBP10.53□□□□□ -0.72
CCDC40-207ENST00000572253 GTDC1Q4AE62 458 aa10.53□□□□□ -0.72
CCDC40-207ENST00000572253 ANKRD34AQ69YU3 496 aa10.53□□□□□ -0.72
CCDC40-207ENST00000572253 CES5AQ6NT32 575 aa10.53□□□□□ -0.72
CCDC40-207ENST00000572253 ZNF280BQ86YH2 543 aa10.53□□□□□ -0.72
CCDC40-207ENST00000572253 RBFAQ8N0V3 343 aa10.53□□□□□ -0.72
CCDC40-207ENST00000572253 TTC9BQ8N6N2 239 aa10.53□□□□□ -0.72
CCDC40-207ENST00000572253 CLHC1Q8NHS4 586 aa10.53□□□□□ -0.72
CCDC40-207ENST00000572253 RHBDF1Q96CC6 855 aa10.53□□□□□ -0.72
CCDC40-207ENST00000572253 REXO5Q96IC2 774 aaKnown RBP10.53□□□□□ -0.72
CCDC40-207ENST00000572253 SLC29A3Q9BZD2 475 aa10.53□□□□□ -0.72
CCDC40-207ENST00000572253 SLC25A37Q9NYZ2 338 aa10.53□□□□□ -0.72
CCDC40-207ENST00000572253 RGS17Q9UGC6 210 aaPredicted RBP10.53□□□□□ -0.72
CCDC40-207ENST00000572253 NLRC5Q86WI3 1866 aa10.53□□□□□ -0.72
CCDC40-207ENST00000572253 TDRD15B5MCY1 1934 aaKnown RBP10.52□□□□□ -0.72
CCDC40-207ENST00000572253 TMEM189-UBE2V1I3L0A0 370 aa10.52□□□□□ -0.72
CCDC40-207ENST00000572253 WNT9AO14904 365 aa10.52□□□□□ -0.72
CCDC40-207ENST00000572253 TSPAN3O60637 253 aa10.52□□□□□ -0.72
CCDC40-207ENST00000572253 MRPS14O60783 128 aaKnown RBP10.52□□□□□ -0.72
CCDC40-207ENST00000572253 NTRK1P04629 796 aa10.52□□□□□ -0.72
CCDC40-207ENST00000572253 CYP4B1P13584 511 aa10.52□□□□□ -0.72
CCDC40-207ENST00000572253 PCSK2P16519 638 aa10.52□□□□□ -0.72
CCDC40-207ENST00000572253 ALDH4A1P30038 563 aa10.52□□□□□ -0.72
CCDC40-207ENST00000572253 RPS14P62263 151 aaKnown RBP10.52□□□□□ -0.72
CCDC40-207ENST00000572253 RPS24P62847 133 aaKnown RBP10.52□□□□□ -0.72
CCDC40-207ENST00000572253 KEAP1Q14145 624 aa10.52□□□□□ -0.72
CCDC40-207ENST00000572253 TTLL9Q3SXZ7 439 aa10.52□□□□□ -0.72
CCDC40-207ENST00000572253 OR2T5Q6IEZ7 315 aa10.52□□□□□ -0.72
CCDC40-207ENST00000572253 OR2T29Q8NH02 315 aa10.52□□□□□ -0.72
CCDC40-207ENST00000572253 NETO1Q8TDF5 533 aa10.52□□□□□ -0.72
CCDC40-207ENST00000572253 PHF10Q8WUB8 498 aaKnown RBP10.52□□□□□ -0.72
CCDC40-207ENST00000572253 SOCS4Q8WXH5 440 aa10.52□□□□□ -0.72
CCDC40-207ENST00000572253 ZNF641Q96N77 438 aaPredicted RBP10.52□□□□□ -0.72
CCDC40-207ENST00000572253 PTPN18Q99952 460 aa10.52□□□□□ -0.72
CCDC40-207ENST00000572253 CPPED1Q9BRF8 314 aaPredicted RBP10.52□□□□□ -0.72
CCDC40-207ENST00000572253 CD244Q9BZW8 370 aa10.52□□□□□ -0.72
CCDC40-207ENST00000572253 P2RY12Q9H244 342 aa10.52□□□□□ -0.72
CCDC40-207ENST00000572253 TM9SF3Q9HD45 589 aa10.52□□□□□ -0.72
CCDC40-207ENST00000572253 FBXO8Q9NRD0 319 aa10.52□□□□□ -0.72
CCDC40-207ENST00000572253 LATS2Q9NRM7 1088 aa10.52□□□□□ -0.72
CCDC40-207ENST00000572253 UTS2RQ9UKP6 389 aa10.52□□□□□ -0.72
CCDC40-207ENST00000572253 FADS2O95864 444 aaKnown RBP10.52□□□□□ -0.73
CCDC40-207ENST00000572253 CLK1P49759 484 aaKnown RBP10.52□□□□□ -0.73
CCDC40-207ENST00000572253 PGS1Q32NB8 556 aa10.52□□□□□ -0.73
CCDC40-207ENST00000572253 C5orf22Q49AR2 442 aa10.52□□□□□ -0.73
CCDC40-207ENST00000572253 FAM171A1Q5VUB5 890 aa10.52□□□□□ -0.73
CCDC40-207ENST00000572253 TMEM179BQ7Z7N9 219 aa10.52□□□□□ -0.73
CCDC40-207ENST00000572253 SERPINA9Q86WD7 417 aa10.52□□□□□ -0.73
CCDC40-207ENST00000572253 RGL4Q8IZJ4 473 aa10.52□□□□□ -0.73
CCDC40-207ENST00000572253 ELMOD1Q8N336 334 aa10.52□□□□□ -0.73
CCDC40-207ENST00000572253 SCAIQ8N9R8 606 aa10.52□□□□□ -0.73
CCDC40-207ENST00000572253 OR6Q1Q8NGQ2 317 aa10.52□□□□□ -0.73
CCDC40-207ENST00000572253 NDNFQ8TB73 568 aa10.52□□□□□ -0.73
CCDC40-207ENST00000572253 HPS1Q92902 700 aa10.52□□□□□ -0.73
CCDC40-207ENST00000572253 B3GALT6Q96L58 329 aa10.52□□□□□ -0.73
CCDC40-207ENST00000572253 PSD2Q9BQI7 771 aa10.52□□□□□ -0.73
CCDC40-207ENST00000572253 ATP13A3Q9H7F0 1226 aa10.52□□□□□ -0.73
CCDC40-207ENST00000572253 PAK1IP1Q9NWT1 392 aaPredicted RBP10.52□□□□□ -0.73
CCDC40-207ENST00000572253 RPS6KA6Q9UK32 745 aa10.52□□□□□ -0.73
CCDC40-207ENST00000572253 AQP9O43315 295 aa10.52□□□□□ -0.73
CCDC40-207ENST00000572253 CCNDBP1O95273 360 aa10.52□□□□□ -0.73
CCDC40-207ENST00000572253 PRPS2P11908 318 aa10.52□□□□□ -0.73
CCDC40-207ENST00000572253 BCKDHAP12694 445 aa10.52□□□□□ -0.73
CCDC40-207ENST00000572253 JUNDP17535 347 aa10.52□□□□□ -0.73
CCDC40-207ENST00000572253 PFKLP17858 780 aa10.52□□□□□ -0.73
CCDC40-207ENST00000572253 MAP2K4P45985 399 aa10.52□□□□□ -0.73
CCDC40-207ENST00000572253 VBP1P61758 197 aa10.52□□□□□ -0.73
CCDC40-207ENST00000572253 AGAP7PQ5VUJ5 663 aa10.52□□□□□ -0.73
CCDC40-207ENST00000572253 RNF165Q6ZSG1 346 aa10.52□□□□□ -0.73
CCDC40-207ENST00000572253 TRIM46Q7Z4K8 759 aa10.52□□□□□ -0.73
CCDC40-207ENST00000572253 ZNF598Q86UK7 904 aaKnown RBP10.52□□□□□ -0.73
CCDC40-207ENST00000572253 MSRB3Q8IXL7 192 aa10.52□□□□□ -0.73
CCDC40-207ENST00000572253 TTC29Q8NA56 475 aaPredicted RBP10.52□□□□□ -0.73
CCDC40-207ENST00000572253 IPCEF1Q8WWN9 437 aaPredicted RBP10.52□□□□□ -0.73
CCDC40-207ENST00000572253 ZHX1-C8orf76Q96EF9 292 aa10.52□□□□□ -0.73
CCDC40-207ENST00000572253 TMEFF2Q9UIK5 374 aaPredicted RBP10.52□□□□□ -0.73
CCDC40-207ENST00000572253 TSC22D4Q9Y3Q8 395 aa10.52□□□□□ -0.73
CCDC40-207ENST00000572253 CCL27Q9Y4X3 112 aa10.52□□□□□ -0.73
CCDC40-207ENST00000572253 PCDHB14Q9Y5E9 798 aa10.52□□□□□ -0.73
CCDC40-207ENST00000572253 ARVCFO00192 962 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 MITFO75030 526 aaPredicted RBP10.51□□□□□ -0.73
CCDC40-207ENST00000572253 SLC25A14O95258 325 aaPredicted RBP10.51□□□□□ -0.73
CCDC40-207ENST00000572253 SLC6A4P31645 630 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 DNAJA1P31689 397 aaKnown RBP10.51□□□□□ -0.73
CCDC40-207ENST00000572253 CLCA4Q14CN2 919 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 TAF1CQ15572 869 aaPredicted RBP10.51□□□□□ -0.73
CCDC40-207ENST00000572253 ADPRMQ3LIE5 342 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 LAIR2Q6ISS4 152 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 METTL2BQ6P1Q9 378 aaKnown RBP10.51□□□□□ -0.73
CCDC40-207ENST00000572253 PLEKHG7Q6ZR37 379 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 PAGE2Q7Z2X7 111 aa10.51□□□□□ -0.73
CCDC40-207ENST00000572253 BTLAQ7Z6A9 289 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms