RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 LHPPQ9H008 270 aa19.09■□□□□ 0.65
CCDC40-206ENST00000572083 GBA3Q9H227 469 aa19.09■□□□□ 0.65
CCDC40-206ENST00000572083 C10orf88Q9H8K7 445 aa19.09■□□□□ 0.65
CCDC40-206ENST00000572083 ZDHHC3Q9NYG2 299 aa19.09■□□□□ 0.65
CCDC40-206ENST00000572083 PLAGL1Q9UM63 463 aa19.09■□□□□ 0.65
CCDC40-206ENST00000572083 TDRKHQ9Y2W6 561 aaKnown RBP19.09■□□□□ 0.65
CCDC40-206ENST00000572083 HS3ST3B1Q9Y662 390 aa19.09■□□□□ 0.65
CCDC40-206ENST00000572083 IGLV3-16A0A075B6K0 115 aa19.08■□□□□ 0.64
CCDC40-206ENST00000572083 MBD3O95983 291 aa19.08■□□□□ 0.64
CCDC40-206ENST00000572083 SNRPB2P08579 225 aaKnown RBP19.08■□□□□ 0.64
CCDC40-206ENST00000572083 PEBP1P30086 187 aaKnown RBP19.08■□□□□ 0.64
CCDC40-206ENST00000572083 MC4RP32245 332 aa19.08■□□□□ 0.64
CCDC40-206ENST00000572083 GEMP55040 296 aa19.08■□□□□ 0.64
CCDC40-206ENST00000572083 OTUD4Q01804 1114 aaKnown RBP19.08■□□□□ 0.64
CCDC40-206ENST00000572083 NKG7Q16617 165 aa19.08■□□□□ 0.64
CCDC40-206ENST00000572083 TAZQ16635 292 aa19.08■□□□□ 0.64
CCDC40-206ENST00000572083 TUBB8Q3ZCM7 444 aa19.08■□□□□ 0.64
CCDC40-206ENST00000572083 KIRREL2Q6UWL6 708 aa19.08■□□□□ 0.64
CCDC40-206ENST00000572083 GDF7Q7Z4P5 450 aa19.08■□□□□ 0.64
CCDC40-206ENST00000572083 BCORP1Q8N888 145 aa19.08■□□□□ 0.64
CCDC40-206ENST00000572083 CATSPER1Q8NEC5 780 aa19.08■□□□□ 0.64
CCDC40-206ENST00000572083 HEXDCQ8WVB3 486 aa19.08■□□□□ 0.64
CCDC40-206ENST00000572083 FKBP10Q96AY3 582 aa19.08■□□□□ 0.64
CCDC40-206ENST00000572083 NACC2Q96BF6 587 aa19.08■□□□□ 0.64
CCDC40-206ENST00000572083 THOC3Q96J01 351 aaKnown RBP19.08■□□□□ 0.64
CCDC40-206ENST00000572083 LURAP1Q96LR2 239 aa19.08■□□□□ 0.64
CCDC40-206ENST00000572083 MAGEB10Q96LZ2 347 aaPredicted RBP19.08■□□□□ 0.64
CCDC40-206ENST00000572083 SOX17Q9H6I2 414 aaPredicted RBP19.08■□□□□ 0.64
CCDC40-206ENST00000572083 TRHDEQ9UKU6 1024 aa19.08■□□□□ 0.64
CCDC40-206ENST00000572083 PLCL2Q9UPR0 1127 aa19.08■□□□□ 0.64
CCDC40-206ENST00000572083 ASF1AQ9Y294 204 aa19.08■□□□□ 0.64
CCDC40-206ENST00000572083 KLHL20Q9Y2M5 609 aa19.08■□□□□ 0.64
CCDC40-206ENST00000572083 CNTRLQ7Z7A1 2325 aa19.08■□□□□ 0.64
CCDC40-206ENST00000572083 HIVEP1P15822 2718 aa19.07■□□□□ 0.64
CCDC40-206ENST00000572083 A0A1B0GX78 115 aa19.07■□□□□ 0.64
CCDC40-206ENST00000572083 ISM1B1AKI9 464 aa19.07■□□□□ 0.64
CCDC40-206ENST00000572083 SPOPO43791 374 aa19.07■□□□□ 0.64
CCDC40-206ENST00000572083 CRTAMO95727 393 aa19.07■□□□□ 0.64
CCDC40-206ENST00000572083 TPBGLP0DKB5 382 aa19.07■□□□□ 0.64
CCDC40-206ENST00000572083 ACRV1P26436 265 aa19.07■□□□□ 0.64
CCDC40-206ENST00000572083 ADRA1AP35348 466 aa19.07■□□□□ 0.64
CCDC40-206ENST00000572083 GCGRP47871 477 aa19.07■□□□□ 0.64
CCDC40-206ENST00000572083 ART3Q13508 389 aa19.07■□□□□ 0.64
CCDC40-206ENST00000572083 BRD3Q15059 726 aa19.07■□□□□ 0.64
CCDC40-206ENST00000572083 ASTE1Q2TB18 679 aaPredicted RBP19.07■□□□□ 0.64
CCDC40-206ENST00000572083 RANBP10Q6VN20 620 aa19.07■□□□□ 0.64
CCDC40-206ENST00000572083 COX15Q7KZN9 410 aa19.07■□□□□ 0.64
CCDC40-206ENST00000572083 SERPINA9Q86WD7 417 aa19.07■□□□□ 0.64
CCDC40-206ENST00000572083 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.07■□□□□ 0.64
CCDC40-206ENST00000572083 ITLN2Q8WWU7 325 aaPredicted RBP19.07■□□□□ 0.64
CCDC40-206ENST00000572083 DLG3Q92796 817 aa19.07■□□□□ 0.64
CCDC40-206ENST00000572083 MESP1Q9BRJ9 268 aa19.07■□□□□ 0.64
CCDC40-206ENST00000572083 EURLQ9NYK6 297 aa19.07■□□□□ 0.64
CCDC40-206ENST00000572083 CTSFQ9UBX1 484 aa19.07■□□□□ 0.64
CCDC40-206ENST00000572083 SETD2Q9BYW2 2564 aaPredicted RBP19.06■□□□□ 0.64
CCDC40-206ENST00000572083 GOLGA6L22H0YM25 854 aa19.06■□□□□ 0.64
CCDC40-206ENST00000572083 ANXA9O76027 345 aa19.06■□□□□ 0.64
CCDC40-206ENST00000572083 MAGP20916 626 aa19.06■□□□□ 0.64
CCDC40-206ENST00000572083 Q0VFX4 171 aa19.06■□□□□ 0.64
CCDC40-206ENST00000572083 RBBP7Q16576 425 aa19.06■□□□□ 0.64
CCDC40-206ENST00000572083 SLC5A12Q1EHB4 618 aa19.06■□□□□ 0.64
CCDC40-206ENST00000572083 FCRL6Q6DN72 434 aa19.06■□□□□ 0.64
CCDC40-206ENST00000572083 OVCH1Q7RTY7 1134 aa19.06■□□□□ 0.64
CCDC40-206ENST00000572083 RHOT2Q8IXI1 618 aa19.06■□□□□ 0.64
CCDC40-206ENST00000572083 OR1N1Q8NGS0 311 aa19.06■□□□□ 0.64
CCDC40-206ENST00000572083 RELTQ969Z4 430 aa19.06■□□□□ 0.64
CCDC40-206ENST00000572083 DNAJC1Q96KC8 554 aaKnown RBP19.06■□□□□ 0.64
CCDC40-206ENST00000572083 WDR54Q9H977 334 aa19.06■□□□□ 0.64
CCDC40-206ENST00000572083 OR6C2Q9NZP2 312 aa19.06■□□□□ 0.64
CCDC40-206ENST00000572083 KLF2Q9Y5W3 355 aaPredicted RBP19.06■□□□□ 0.64
CCDC40-206ENST00000572083 hCG_1818297A0A087WSY0 165 aa19.05■□□□□ 0.64
CCDC40-206ENST00000572083 KLHL18O94889 574 aa19.05■□□□□ 0.64
CCDC40-206ENST00000572083 COMTP21964 271 aa19.05■□□□□ 0.64
CCDC40-206ENST00000572083 PSMB4P28070 264 aa19.05■□□□□ 0.64
CCDC40-206ENST00000572083 RBL1P28749 1068 aa19.05■□□□□ 0.64
CCDC40-206ENST00000572083 TDGF1P3P51864 188 aa19.05■□□□□ 0.64
CCDC40-206ENST00000572083 MFAP5Q13361 173 aa19.05■□□□□ 0.64
CCDC40-206ENST00000572083 MSLNQ13421 630 aaPredicted RBP19.05■□□□□ 0.64
CCDC40-206ENST00000572083 GPR33Q49SQ1 333 aa19.05■□□□□ 0.64
CCDC40-206ENST00000572083 ISLR2Q6UXK2 745 aa19.05■□□□□ 0.64
CCDC40-206ENST00000572083 NAPRTQ6XQN6 538 aa19.05■□□□□ 0.64
CCDC40-206ENST00000572083 TAS2R42Q7RTR8 314 aa19.05■□□□□ 0.64
CCDC40-206ENST00000572083 LUZP1Q86V48 1076 aa19.05■□□□□ 0.64
CCDC40-206ENST00000572083 METTL27Q8N6F8 245 aaPredicted RBP19.05■□□□□ 0.64
CCDC40-206ENST00000572083 OR11G2Q8NGC1 345 aa19.05■□□□□ 0.64
CCDC40-206ENST00000572083 MRM3Q9HC36 420 aaKnown RBP19.05■□□□□ 0.64
CCDC40-206ENST00000572083 ITGB1BP2Q9UKP3 347 aa19.05■□□□□ 0.64
CCDC40-206ENST00000572083 NF1P21359 2839 aa19.04■□□□□ 0.64
CCDC40-206ENST00000572083 TRBV5-4A0A0C4DH59 114 aa19.04■□□□□ 0.64
CCDC40-206ENST00000572083 HACD1B0YJ81 288 aa19.04■□□□□ 0.64
CCDC40-206ENST00000572083 AKR1B10O60218 316 aa19.04■□□□□ 0.64
CCDC40-206ENST00000572083 ALBP02768 609 aa19.04■□□□□ 0.64
CCDC40-206ENST00000572083 MCM3P25205 808 aa19.04■□□□□ 0.64
CCDC40-206ENST00000572083 ACADLP28330 430 aa19.04■□□□□ 0.64
CCDC40-206ENST00000572083 PTGER4P35408 488 aa19.04■□□□□ 0.64
CCDC40-206ENST00000572083 SLC1A1P43005 524 aa19.04■□□□□ 0.64
CCDC40-206ENST00000572083 ARSFP54793 590 aa19.04■□□□□ 0.64
CCDC40-206ENST00000572083 TFDP3Q5H9I0 405 aa19.04■□□□□ 0.64
CCDC40-206ENST00000572083 ZNF324BQ6AW86 544 aaPredicted RBP19.04■□□□□ 0.64
CCDC40-206ENST00000572083 ITPRIPL1Q6GPH6 555 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms