RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 SYNPO2LQ9H987 977 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 POLR1BQ9H9Y6 1135 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 ACTR10Q9NZ32 417 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 ZFATQ9P243 1243 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 SEMA5BQ9P283 1151 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 EPHA6Q9UF33 1036 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.77□□□□□ -1.33
SMG6-209ENST00000571442 POMT2Q9UKY4 750 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 VPS9D1Q9Y2B5 631 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 KLHL20Q9Y2M5 609 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 HEBP2Q9Y5Z4 205 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 AK5Q9Y6K8 562 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 COLEC10Q9Y6Z7 277 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 V9GYY5 206 aaPredicted RBP6.77□□□□□ -1.33
SMG6-209ENST00000571442 PCM1Q15154 2024 aa6.77□□□□□ -1.33
SMG6-209ENST00000571442 NBEAQ8NFP9 2946 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 GSAPA4D1B5 854 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 GFYI3L273 518 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 HGSO14964 777 aaPredicted RBP6.76□□□□□ -1.33
SMG6-209ENST00000571442 PFDN6O15212 129 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 PHGDHO43175 533 aaKnown RBP6.76□□□□□ -1.33
SMG6-209ENST00000571442 PRICKLE3O43900 615 aaPredicted RBP6.76□□□□□ -1.33
SMG6-209ENST00000571442 VPS26AO75436 327 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 DXOO77932 396 aaKnown RBP6.76□□□□□ -1.33
SMG6-209ENST00000571442 TIAF1O95411 115 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 ACSL3O95573 720 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 CHRM5P08912 532 aaPredicted RBP6.76□□□□□ -1.33
SMG6-209ENST00000571442 GSTA2P09210 222 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 ANKRD34CP0C6C1 535 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 MPC1LP0DKB6 136 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 FOLR1P15328 257 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 ST6GAL1P15907 406 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 UGT2B7P16662 529 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 ZNF28P17035 718 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 SAT1P21673 171 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 GCAP28676 217 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 PRDX3P30048 256 aaKnown RBP6.76□□□□□ -1.33
SMG6-209ENST00000571442 ATP5DP30049 168 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 MAPK10P53779 464 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 PLOD1Q02809 727 aaPredicted RBP6.76□□□□□ -1.33
SMG6-209ENST00000571442 TRA2AQ13595 282 aaKnown RBP eCLIP6.76□□□□□ -1.33
SMG6-209ENST00000571442 NAA30Q147X3 362 aaPredicted RBP6.76□□□□□ -1.33
SMG6-209ENST00000571442 CLPPQ16740 277 aaPredicted RBP6.76□□□□□ -1.33
SMG6-209ENST00000571442 PHKG1Q16816 387 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 TBC1D25Q3MII6 688 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 DNTTIP2Q5QJE6 756 aaKnown RBP6.76□□□□□ -1.33
SMG6-209ENST00000571442 PRAMEF17Q5VTA0 474 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 CACHD1Q5VU97 1274 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 ANKS6Q68DC2 871 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 FAM45BPQ6NSW5 357 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 CYS1Q717R9 158 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 PRSS42Q7Z5A4 293 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 SLC26A11Q86WA9 606 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 OOSP2Q86WS3 158 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 PROSER1Q86XN7 944 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 PLXDC1Q8IUK5 500 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 DCUN1D3Q8IWE4 304 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 CTAGE3PQ8IX95 158 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 LRRC56Q8IYG6 542 aaPredicted RBP6.76□□□□□ -1.33
SMG6-209ENST00000571442 SPATA6LQ8N4H0 392 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 PPFIBP2Q8ND30 876 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 FAM45AQ8TCE6 357 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 SKA2Q8WVK7 121 aaPredicted RBP6.76□□□□□ -1.33
SMG6-209ENST00000571442 ASB11Q8WXH4 323 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 KLHL6Q8WZ60 621 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 USP7Q93009 1102 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 NXPE2Q96DL1 559 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 MRRFQ96E11 262 aaKnown RBP6.76□□□□□ -1.33
SMG6-209ENST00000571442 LINGO1Q96FE5 620 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 SLC41A2Q96JW4 573 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 PKP4Q99569 1192 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 RBBP8Q99708 897 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 FUT8Q9BYC5 575 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 ZMYND15Q9H091 742 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 CCDC68Q9H2F9 335 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 RHOJQ9H4E5 214 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 EPB41L1Q9H4G0 881 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 ZNF768Q9H5H4 540 aaKnown RBP6.76□□□□□ -1.33
SMG6-209ENST00000571442 CCDC86Q9H6F5 360 aaKnown RBP6.76□□□□□ -1.33
SMG6-209ENST00000571442 FAM60AQ9NP50 221 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 KLHL42Q9P2K6 505 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 TRMT6Q9UJA5 497 aaKnown RBP6.76□□□□□ -1.33
SMG6-209ENST00000571442 SH2B3Q9UQQ2 575 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 RAXQ9Y2V3 346 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 VWA7Q9Y334 891 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 PCDHGA8Q9Y5G5 932 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 B3GALT1Q9Y5Z6 326 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 COMMD10Q9Y6G5 202 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 FER1L5A0AVI2 2057 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 HEATR5BQ9P2D3 2071 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 IGSF10Q6WRI0 2623 aa6.76□□□□□ -1.33
SMG6-209ENST00000571442 TEX51A0A1B0GUA7 166 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 PIPSLA2A3N6 862 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 TLCD2A6NGC4 264 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 SLC9B1P1A6NJY1 282 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 F8W8V4 182 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 MYO1CO00159 1063 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 CDC7O00311 574 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 RASGRF2O14827 1237 aa6.75□□□□□ -1.33
SMG6-209ENST00000571442 KPNA5O15131 536 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms