RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 VNN3Q9NY84 501 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 SLC25A37Q9NYZ2 338 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 SAMD4AQ9UPU9 718 aaKnown RBP15.09■□□□□ 0.01
SMG6-207ENST00000570756 SPO11Q9Y5K1 396 aa15.09■□□□□ 0.01
SMG6-207ENST00000570756 NDUFS3O75489 264 aa15.08■□□□□ 0.01
SMG6-207ENST00000570756 PRKCAP17252 672 aa15.08■□□□□ 0.01
SMG6-207ENST00000570756 DNAJA1P31689 397 aaKnown RBP15.08■□□□□ 0.01
SMG6-207ENST00000570756 HTR6P50406 440 aa15.08■□□□□ 0.01
SMG6-207ENST00000570756 CLCNKBP51801 687 aa15.08■□□□□ 0.01
SMG6-207ENST00000570756 NRG1Q02297 640 aaPredicted RBP15.08■□□□□ 0.01
SMG6-207ENST00000570756 TIGD6Q17RP2 521 aa15.08■□□□□ 0.01
SMG6-207ENST00000570756 RFTN2Q52LD8 501 aaPredicted RBP15.08■□□□□ 0.01
SMG6-207ENST00000570756 SETMARQ53H47 684 aaPredicted RBP15.08■□□□□ 0.01
SMG6-207ENST00000570756 SMUG1Q53HV7 270 aa15.08■□□□□ 0.01
SMG6-207ENST00000570756 MSANTD2Q6P1R3 559 aa15.08■□□□□ 0.01
SMG6-207ENST00000570756 P3H2Q8IVL5 708 aa15.08■□□□□ 0.01
SMG6-207ENST00000570756 MSRB3Q8IXL7 192 aa15.08■□□□□ 0.01
SMG6-207ENST00000570756 UMODL1-AS1Q8N2C9 162 aa15.08■□□□□ 0.01
SMG6-207ENST00000570756 NUDT8Q8WV74 236 aa15.08■□□□□ 0.01
SMG6-207ENST00000570756 ESAMQ96AP7 390 aa15.08■□□□□ 0.01
SMG6-207ENST00000570756 TADA1Q96BN2 335 aa15.08■□□□□ 0.01
SMG6-207ENST00000570756 COPS4Q9BT78 406 aa15.08■□□□□ 0.01
SMG6-207ENST00000570756 DPY30Q9C005 99 aa15.08■□□□□ 0.01
SMG6-207ENST00000570756 FBXL12Q9NXK8 326 aa15.08■□□□□ 0.01
SMG6-207ENST00000570756 BTBD3Q9Y2F9 522 aa15.08■□□□□ 0.01
SMG6-207ENST00000570756 MED16Q9Y2X0 877 aa15.08■□□□□ 0.01
SMG6-207ENST00000570756 GOLGA8CPA6NN73 597 aa15.08■□□□□ 0
SMG6-207ENST00000570756 MYO1GB0I1T2 1018 aa15.08■□□□□ 0
SMG6-207ENST00000570756 J3KR12 359 aa15.08■□□□□ 0
SMG6-207ENST00000570756 DSCR3O14972 297 aa15.08■□□□□ 0
SMG6-207ENST00000570756 VPS26AO75436 327 aa15.08■□□□□ 0
SMG6-207ENST00000570756 MOCS2O96007 188 aaPredicted RBP15.08■□□□□ 0
SMG6-207ENST00000570756 PGRP06401 933 aa15.08■□□□□ 0
SMG6-207ENST00000570756 SLC2A4P14672 509 aa15.08■□□□□ 0
SMG6-207ENST00000570756 FPR1P21462 350 aa15.08■□□□□ 0
SMG6-207ENST00000570756 PCSK1P29120 753 aa15.08■□□□□ 0
SMG6-207ENST00000570756 SOX6P35712 828 aa15.08■□□□□ 0
SMG6-207ENST00000570756 DDOSTP39656 456 aa15.08■□□□□ 0
SMG6-207ENST00000570756 RPL38P63173 70 aaKnown RBP15.08■□□□□ 0
SMG6-207ENST00000570756 PTPRCAPQ14761 206 aa15.08■□□□□ 0
SMG6-207ENST00000570756 AAK1Q2M2I8 961 aa15.08■□□□□ 0
SMG6-207ENST00000570756 SPATC1Q76KD6 591 aa15.08■□□□□ 0
SMG6-207ENST00000570756 HORMAD1Q86X24 394 aa15.08■□□□□ 0
SMG6-207ENST00000570756 GATAD2AQ86YP4 633 aa15.08■□□□□ 0
SMG6-207ENST00000570756 GALNT12Q8IXK2 581 aa15.08■□□□□ 0
SMG6-207ENST00000570756 EMID1Q96A84 441 aaPredicted RBP15.08■□□□□ 0
SMG6-207ENST00000570756 TMCO6Q96DC7 493 aa15.08■□□□□ 0
SMG6-207ENST00000570756 HMCESQ96FZ2 354 aa15.08■□□□□ 0
SMG6-207ENST00000570756 MED30Q96HR3 178 aa15.08■□□□□ 0
SMG6-207ENST00000570756 ITM2CQ9NQX7 267 aa15.08■□□□□ 0
SMG6-207ENST00000570756 RASSF1Q9NS23 344 aa15.08■□□□□ 0
SMG6-207ENST00000570756 KRT84Q9NSB2 600 aa15.08■□□□□ 0
SMG6-207ENST00000570756 ABCC13Q9NSE7 274 aa15.08■□□□□ 0
SMG6-207ENST00000570756 TRMT13Q9NUP7 481 aaKnown RBP15.08■□□□□ 0
SMG6-207ENST00000570756 LYVE1Q9Y5Y7 322 aa15.08■□□□□ 0
SMG6-207ENST00000570756 MICAL3Q7RTP6 2002 aa15.08■□□□□ 0
SMG6-207ENST00000570756 FAM25AB3EWG3 89 aa15.07■□□□□ 0
SMG6-207ENST00000570756 FAM25CB3EWG5 89 aa15.07■□□□□ 0
SMG6-207ENST00000570756 FAM25GB3EWG6 89 aa15.07■□□□□ 0
SMG6-207ENST00000570756 SLC15A1P46059 708 aa15.07■□□□□ 0
SMG6-207ENST00000570756 IHHQ14623 411 aa15.07■□□□□ 0
SMG6-207ENST00000570756 STARD3Q14849 445 aa15.07■□□□□ 0
SMG6-207ENST00000570756 PTGR1Q14914 329 aa15.07■□□□□ 0
SMG6-207ENST00000570756 FBXO43Q4G163 708 aa15.07■□□□□ 0
SMG6-207ENST00000570756 CARD16Q5EG05 197 aa15.07■□□□□ 0
SMG6-207ENST00000570756 ZCCHC8Q6NZY4 707 aaKnown RBP15.07■□□□□ 0
SMG6-207ENST00000570756 CEP68Q76N32 757 aa15.07■□□□□ 0
SMG6-207ENST00000570756 CALHM3Q86XJ0 350 aa15.07■□□□□ 0
SMG6-207ENST00000570756 TEX26Q8N6G2 289 aa15.07■□□□□ 0
SMG6-207ENST00000570756 ARRDC2Q8TBH0 407 aa15.07■□□□□ 0
SMG6-207ENST00000570756 MYDGFQ969H8 173 aa15.07■□□□□ 0
SMG6-207ENST00000570756 HBEGFQ99075 208 aa15.07■□□□□ 0
SMG6-207ENST00000570756 SLA2Q9H6Q3 261 aa15.07■□□□□ 0
SMG6-207ENST00000570756 TRMT6Q9UJA5 497 aaKnown RBP15.07■□□□□ 0
SMG6-207ENST00000570756 VPS9D1Q9Y2B5 631 aa15.07■□□□□ 0
SMG6-207ENST00000570756 HS3ST4Q9Y661 456 aa15.07■□□□□ 0
SMG6-207ENST00000570756 RRN3P2A6NIE6 340 aa15.07■□□□□ 0
SMG6-207ENST00000570756 MUSKO15146 869 aa15.07■□□□□ 0
SMG6-207ENST00000570756 KRT6AP02538 564 aa15.07■□□□□ 0
SMG6-207ENST00000570756 KRT6BP04259 564 aa15.07■□□□□ 0
SMG6-207ENST00000570756 IL2P60568 153 aa15.07■□□□□ 0
SMG6-207ENST00000570756 SMU1Q2TAY7 513 aa15.07■□□□□ 0
SMG6-207ENST00000570756 ARTNQ5T4W7 220 aa15.07■□□□□ 0
SMG6-207ENST00000570756 CACHD1Q5VU97 1274 aa15.07■□□□□ 0
SMG6-207ENST00000570756 SLC46A3Q7Z3Q1 461 aa15.07■□□□□ 0
SMG6-207ENST00000570756 PHACTR4Q8IZ21 702 aa15.07■□□□□ 0
SMG6-207ENST00000570756 PAF1Q8N7H5 531 aa15.07■□□□□ 0
SMG6-207ENST00000570756 SETD6Q8TBK2 473 aa15.07■□□□□ 0
SMG6-207ENST00000570756 MYLPFQ96A32 169 aa15.07■□□□□ 0
SMG6-207ENST00000570756 CDKN2AIPNLQ96HQ2 116 aa15.07■□□□□ 0
SMG6-207ENST00000570756 PITX2Q99697 317 aa15.07■□□□□ 0
SMG6-207ENST00000570756 TMEM246Q9BRR3 403 aa15.07■□□□□ 0
SMG6-207ENST00000570756 NUDT4Q9NZJ9 180 aa15.07■□□□□ 0
SMG6-207ENST00000570756 PDP1Q9P0J1 537 aaPredicted RBP15.07■□□□□ 0
SMG6-207ENST00000570756 CRNNQ9UBG3 495 aaPredicted RBP15.07■□□□□ 0
SMG6-207ENST00000570756 IPPQ9Y573 584 aa15.07■□□□□ 0
SMG6-207ENST00000570756 ASB1Q9Y576 335 aa15.07■□□□□ 0
SMG6-207ENST00000570756 TNPO3Q9Y5L0 923 aaKnown RBP15.07■□□□□ 0
SMG6-207ENST00000570756 EIF3FO00303 357 aaPredicted RBP15.06■□□□□ 0
SMG6-207ENST00000570756 PER2O15055 1255 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms