RNA–Protein interactions for RNA: ENST00000570296.1

CLK3-227, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 916 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-227ENST00000570296 UGT1A1P22309 533 aa17.29■□□□□ 0.36
CLK3-227ENST00000570296 DNASE1P24855 282 aa17.29■□□□□ 0.36
CLK3-227ENST00000570296 SPAM1P38567 509 aa17.29■□□□□ 0.36
CLK3-227ENST00000570296 NSG1P42857 185 aa17.29■□□□□ 0.36
CLK3-227ENST00000570296 KLK7P49862 253 aa17.29■□□□□ 0.36
CLK3-227ENST00000570296 MYBPHQ13203 477 aa17.29■□□□□ 0.36
CLK3-227ENST00000570296 ITGA9Q13797 1035 aa17.29■□□□□ 0.36
CLK3-227ENST00000570296 PAFAH1B3Q15102 231 aaKnown RBP17.29■□□□□ 0.36
CLK3-227ENST00000570296 PPP2R5EQ16537 467 aa17.29■□□□□ 0.36
CLK3-227ENST00000570296 BCL7AQ4VC05 210 aa17.29■□□□□ 0.36
CLK3-227ENST00000570296 ATP13A4Q4VNC1 1196 aa17.29■□□□□ 0.36
CLK3-227ENST00000570296 HSP90AA4PQ58FG1 418 aa17.29■□□□□ 0.36
CLK3-227ENST00000570296 ATG9BQ674R7 924 aa17.29■□□□□ 0.36
CLK3-227ENST00000570296 CLEC9AQ6UXN8 241 aa17.29■□□□□ 0.36
CLK3-227ENST00000570296 RIPOR1Q6ZS17 1223 aa17.29■□□□□ 0.36
CLK3-227ENST00000570296 DOLPP1Q86YN1 238 aa17.29■□□□□ 0.36
CLK3-227ENST00000570296 MLKLQ8NB16 471 aa17.29■□□□□ 0.36
CLK3-227ENST00000570296 NRTNQ99748 197 aa17.29■□□□□ 0.36
CLK3-227ENST00000570296 MESP1Q9BRJ9 268 aa17.29■□□□□ 0.36
CLK3-227ENST00000570296 MVB12BQ9H7P6 319 aa17.29■□□□□ 0.36
CLK3-227ENST00000570296 UGT1A7Q9HAW7 530 aa17.29■□□□□ 0.36
CLK3-227ENST00000570296 UGT1A10Q9HAW8 530 aa17.29■□□□□ 0.36
CLK3-227ENST00000570296 UGT1A8Q9HAW9 530 aa17.29■□□□□ 0.36
CLK3-227ENST00000570296 CBX8Q9HC52 389 aa17.29■□□□□ 0.36
CLK3-227ENST00000570296 SMOXQ9NWM0 555 aa17.29■□□□□ 0.36
CLK3-227ENST00000570296 TAS2R14Q9NYV8 317 aa17.29■□□□□ 0.36
CLK3-227ENST00000570296 IL1RAPL1Q9NZN1 696 aa17.29■□□□□ 0.36
CLK3-227ENST00000570296 SPO11Q9Y5K1 396 aa17.29■□□□□ 0.36
CLK3-227ENST00000570296 FAM227AF5H4B4 570 aa17.28■□□□□ 0.36
CLK3-227ENST00000570296 HEXAP06865 529 aa17.28■□□□□ 0.36
CLK3-227ENST00000570296 TCF4P15884 667 aa17.28■□□□□ 0.36
CLK3-227ENST00000570296 ADSLP30566 484 aaPredicted RBP17.28■□□□□ 0.36
CLK3-227ENST00000570296 AKT1P31749 480 aa17.28■□□□□ 0.36
CLK3-227ENST00000570296 RAB28P51157 221 aa17.28■□□□□ 0.36
CLK3-227ENST00000570296 ZNF766Q5HY98 468 aa17.28■□□□□ 0.36
CLK3-227ENST00000570296 CCDC183Q5T5S1 534 aa17.28■□□□□ 0.36
CLK3-227ENST00000570296 NCBP2-AS2Q69YL0 99 aa17.28■□□□□ 0.36
CLK3-227ENST00000570296 DET1Q7L5Y6 550 aa17.28■□□□□ 0.36
CLK3-227ENST00000570296 NLRP9Q7RTR0 991 aa17.28■□□□□ 0.36
CLK3-227ENST00000570296 CFAP206Q8IYR0 622 aa17.28■□□□□ 0.36
CLK3-227ENST00000570296 LRRN4CLQ8ND94 238 aa17.28■□□□□ 0.36
CLK3-227ENST00000570296 HM13Q8TCT9 377 aa17.28■□□□□ 0.36
CLK3-227ENST00000570296 ASB5Q8WWX0 329 aa17.28■□□□□ 0.36
CLK3-227ENST00000570296 MBD6Q96DN6 1003 aa17.28■□□□□ 0.36
CLK3-227ENST00000570296 OR2A14Q96R47 310 aa17.28■□□□□ 0.36
CLK3-227ENST00000570296 XKR8Q9H6D3 395 aa17.28■□□□□ 0.36
CLK3-227ENST00000570296 EURLQ9NYK6 297 aa17.28■□□□□ 0.36
CLK3-227ENST00000570296 A0A0J9YY10 115 aa17.27■□□□□ 0.36
CLK3-227ENST00000570296 GLYATL1P3A0A0U1RQE8 302 aa17.27■□□□□ 0.36
CLK3-227ENST00000570296 A0A1W2PQ72 361 aa17.27■□□□□ 0.36
CLK3-227ENST00000570296 PRRG2O14669 202 aa17.27■□□□□ 0.36
CLK3-227ENST00000570296 GPR39O43194 453 aa17.27■□□□□ 0.36
CLK3-227ENST00000570296 INHBBP09529 407 aa17.27■□□□□ 0.36
CLK3-227ENST00000570296 COX6A1P12074 109 aa17.27■□□□□ 0.36
CLK3-227ENST00000570296 MX2P20592 715 aa17.27■□□□□ 0.36
CLK3-227ENST00000570296 AP2B1P63010 937 aa17.27■□□□□ 0.36
CLK3-227ENST00000570296 FANCCQ00597 558 aa17.27■□□□□ 0.36
CLK3-227ENST00000570296 ALDH6A1Q02252 535 aaKnown RBP17.27■□□□□ 0.36
CLK3-227ENST00000570296 ABHD17BQ5VST6 288 aa17.27■□□□□ 0.36
CLK3-227ENST00000570296 YOD1Q5VVQ6 348 aaPredicted RBP17.27■□□□□ 0.36
CLK3-227ENST00000570296 CCDC70Q6NSX1 233 aa17.27■□□□□ 0.36
CLK3-227ENST00000570296 CNSTQ6PJW8 725 aa17.27■□□□□ 0.36
CLK3-227ENST00000570296 FAM151BQ6UXP7 276 aa17.27■□□□□ 0.36
CLK3-227ENST00000570296 DAAM2Q86T65 1068 aa17.27■□□□□ 0.36
CLK3-227ENST00000570296 TAB3Q8N5C8 712 aaPredicted RBP17.27■□□□□ 0.36
CLK3-227ENST00000570296 LILRA3Q8N6C8 439 aaPredicted RBP17.27■□□□□ 0.36
CLK3-227ENST00000570296 CNTD1Q8N815 330 aa17.27■□□□□ 0.36
CLK3-227ENST00000570296 LILRB4Q8NHJ6 448 aa17.27■□□□□ 0.36
CLK3-227ENST00000570296 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.27■□□□□ 0.36
CLK3-227ENST00000570296 C8orf44Q96CB5 159 aa17.27■□□□□ 0.36
CLK3-227ENST00000570296 IMP4Q96G21 291 aaKnown RBP17.27■□□□□ 0.36
CLK3-227ENST00000570296 TRABDQ9H4I3 376 aa17.27■□□□□ 0.36
CLK3-227ENST00000570296 STMN3Q9NZ72 180 aa17.27■□□□□ 0.36
CLK3-227ENST00000570296 FAM171A2A8MVW0 826 aa17.26■□□□□ 0.35
CLK3-227ENST00000570296 NPIPA5E9PKD4 350 aa17.26■□□□□ 0.35
CLK3-227ENST00000570296 IFRD1O00458 451 aaPredicted RBP17.26■□□□□ 0.35
CLK3-227ENST00000570296 PROM1O43490 865 aa17.26■□□□□ 0.35
CLK3-227ENST00000570296 TOXO94900 526 aa17.26■□□□□ 0.35
CLK3-227ENST00000570296 NDST3O95803 873 aa17.26■□□□□ 0.35
CLK3-227ENST00000570296 KLC1Q07866 573 aa17.26■□□□□ 0.35
CLK3-227ENST00000570296 OLIG2Q13516 323 aa17.26■□□□□ 0.35
CLK3-227ENST00000570296 KRT81Q14533 505 aa17.26■□□□□ 0.35
CLK3-227ENST00000570296 SLC14A2Q15849 920 aa17.26■□□□□ 0.35
CLK3-227ENST00000570296 TFDP3Q5H9I0 405 aa17.26■□□□□ 0.35
CLK3-227ENST00000570296 TXNRD3NBQ6F5E7 133 aa17.26■□□□□ 0.35
CLK3-227ENST00000570296 C3P1Q6ZMU1 363 aa17.26■□□□□ 0.35
CLK3-227ENST00000570296 CAMKMTQ7Z624 323 aa17.26■□□□□ 0.35
CLK3-227ENST00000570296 GHDCQ8N2G8 530 aa17.26■□□□□ 0.35
CLK3-227ENST00000570296 TSPAN10Q9H1Z9 355 aaPredicted RBP17.26■□□□□ 0.35
CLK3-227ENST00000570296 SAMSN1Q9NSI8 373 aaKnown RBP17.26■□□□□ 0.35
CLK3-227ENST00000570296 CUTCQ9NTM9 273 aa17.26■□□□□ 0.35
CLK3-227ENST00000570296 ZNF358Q9NW07 568 aa17.26■□□□□ 0.35
CLK3-227ENST00000570296 MKL2Q9ULH7 1088 aa17.26■□□□□ 0.35
CLK3-227ENST00000570296 NPIPA1Q9UND3 350 aa17.26■□□□□ 0.35
CLK3-227ENST00000570296 SCINQ9Y6U3 715 aa17.26■□□□□ 0.35
CLK3-227ENST00000570296 HIVEP2P31629 2446 aa17.26■□□□□ 0.35
CLK3-227ENST00000570296 ASPDHA6ND91 283 aa17.25■□□□□ 0.35
CLK3-227ENST00000570296 TTI1O43156 1089 aa17.25■□□□□ 0.35
CLK3-227ENST00000570296 CTAG2O75638 210 aa17.25■□□□□ 0.35
CLK3-227ENST00000570296 EEF1GP26641 437 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms