RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 OLIG2Q13516 323 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 KARSQ15046 597 aaKnown RBP4.58□□□□□ -1.68
CHD9-220ENST00000569794 RNPS1Q15287 305 aaKnown RBP4.58□□□□□ -1.68
CHD9-220ENST00000569794 FUT11Q495W5 492 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 PLEKHO1Q53GL0 409 aaPredicted RBP4.58□□□□□ -1.68
CHD9-220ENST00000569794 RARS2Q5T160 578 aaKnown RBP4.58□□□□□ -1.68
CHD9-220ENST00000569794 SHEQ5VZ18 495 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 C11orf57Q6ZUT1 292 aaPredicted RBP4.58□□□□□ -1.68
CHD9-220ENST00000569794 INTS8Q75QN2 995 aaKnown RBP4.58□□□□□ -1.68
CHD9-220ENST00000569794 TAOK1Q7L7X3 1001 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 TRMT1LQ7Z2T5 733 aaKnown RBP4.58□□□□□ -1.68
CHD9-220ENST00000569794 HAUS6Q7Z4H7 955 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 CTAGE6Q86UF2 777 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 CTAGE4Q8IX94 777 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 SCYL3Q8IZE3 742 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 RBFAQ8N0V3 343 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 ZNF485Q8NCK3 441 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 C2CD4CQ8TF44 421 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 GIMAP1Q8WWP7 306 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 C5orf30Q96GV9 206 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 BBS4Q96RK4 519 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 EGFL8Q99944 293 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 LHPPQ9H008 270 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 PDZD7Q9H5P4 517 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 DENND2DQ9H6A0 471 aaPredicted RBP4.58□□□□□ -1.68
CHD9-220ENST00000569794 AKIRIN1Q9H9L7 192 aaPredicted RBP4.58□□□□□ -1.68
CHD9-220ENST00000569794 NGBQ9NPG2 151 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 OLAHQ9NV23 265 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 NMRK1Q9NWW6 199 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 SOHLH2Q9NX45 425 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 AIPL1Q9NZN9 384 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 DDX25Q9UHL0 483 aaKnown RBP4.58□□□□□ -1.68
CHD9-220ENST00000569794 DHDHQ9UQ10 334 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 ZNF148Q9UQR1 794 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 TMED5Q9Y3A6 229 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 SNX9Q9Y5X1 595 aa4.58□□□□□ -1.68
CHD9-220ENST00000569794 FAM205AQ6ZU69 1335 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 ARPC4-TTLL3A0A0A6YYG9 625 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 A0A1B0GU03 582 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 LNP1A1A4G5 178 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 O00370 1275 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 ST8SIA3O43173 380 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 PRDM1O75626 825 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 ZWINTO95229 277 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 PDGFBP01127 241 aaPredicted RBP4.57□□□□□ -1.68
CHD9-220ENST00000569794 ABHD2P08910 425 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 OR52Z1P0C646 297 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 GZMAP12544 262 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 SLC2A4P14672 509 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 ADRA2CP18825 462 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 EDN2P20800 178 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 SFNP31947 248 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 PCGF2P35227 344 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 SSR1P43307 286 aaKnown RBP4.57□□□□□ -1.68
CHD9-220ENST00000569794 GABRB2P47870 512 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 ARCN1P48444 511 aaKnown RBP4.57□□□□□ -1.68
CHD9-220ENST00000569794 ATP12AP54707 1039 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 ARSFP54793 590 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 ADORA2A-AS1P86434 159 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 ECT2LQ008S8 904 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 MECOMQ03112 1051 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 GBE1Q04446 702 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 RUNX1T1Q06455 604 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 DHX34Q14147 1143 aaKnown RBP4.57□□□□□ -1.68
CHD9-220ENST00000569794 DLG2Q15700 870 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 SGCBQ16585 318 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 HIST2H2ACQ16777 129 aaPredicted RBP4.57□□□□□ -1.68
CHD9-220ENST00000569794 CBWD6Q4V339 395 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 CBWD3Q5JTY5 395 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 TXNDC8Q6A555 127 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 TMEM211Q6ICI0 200 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 AFTPHQ6ULP2 937 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 IL20RBQ6UXL0 311 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 C15orf39Q6ZRI6 1047 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 ARMCX2Q7L311 632 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 DGLUCYQ7Z3D6 616 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 WDR5BQ86VZ2 330 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 MAML2Q8IZL2 1156 aaPredicted RBP4.57□□□□□ -1.68
CHD9-220ENST00000569794 MAB21L3Q8N8X9 362 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 BANPQ8N9N5 519 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 UXS1Q8NBZ7 420 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 SETD9Q8NE22 299 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 GPT2Q8TD30 523 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 ANKRD49Q8WVL7 239 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 SLC5A11Q8WWX8 675 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 CASP10Q92851 521 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 FBXO17Q96EF6 278 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 DTNBP1Q96EV8 351 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 EEF2KMTQ96G04 330 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 BSCL2Q96G97 398 aaPredicted RBP4.57□□□□□ -1.68
CHD9-220ENST00000569794 RMDN2Q96LZ7 410 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 CEP295NLQ96MC4 621 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 INPP5KQ9BT40 448 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 IFT27Q9BW83 186 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 OSBPL8Q9BZF1 889 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 RIBC2Q9H4K1 309 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 COQ10BQ9H8M1 238 aa4.57□□□□□ -1.68
CHD9-220ENST00000569794 CLK4Q9HAZ1 481 aaKnown RBP4.57□□□□□ -1.68
CHD9-220ENST00000569794 PIH1D3Q9NQM4 214 aaKnown RBP4.57□□□□□ -1.68
CHD9-220ENST00000569794 ENTPD7Q9NQZ7 604 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms