RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 MLIPQ5VWP3 458 aa12.68□□□□□ -0.38
SPG7-221ENST00000569720 JMJD6Q6NYC1 403 aaPredicted RBP12.68□□□□□ -0.38
SPG7-221ENST00000569720 PACS1Q6VY07 963 aa12.68□□□□□ -0.38
SPG7-221ENST00000569720 UNC5AQ6ZN44 842 aa12.68□□□□□ -0.38
SPG7-221ENST00000569720 DNAAF3Q8N9W5 541 aa12.68□□□□□ -0.38
SPG7-221ENST00000569720 FDCSPQ8NFU4 85 aa12.68□□□□□ -0.38
SPG7-221ENST00000569720 OR5K2Q8NHB8 316 aa12.68□□□□□ -0.38
SPG7-221ENST00000569720 NRTNQ99748 197 aa12.68□□□□□ -0.38
SPG7-221ENST00000569720 TMEM121Q9BTD3 319 aa12.68□□□□□ -0.38
SPG7-221ENST00000569720 NUDT9Q9BW91 350 aa12.68□□□□□ -0.38
SPG7-221ENST00000569720 SLC29A3Q9BZD2 475 aa12.68□□□□□ -0.38
SPG7-221ENST00000569720 CHRNA10Q9GZZ6 450 aa12.68□□□□□ -0.38
SPG7-221ENST00000569720 HOMER3Q9NSC5 361 aa12.68□□□□□ -0.38
SPG7-221ENST00000569720 TXLNGQ9NUQ3 528 aa12.68□□□□□ -0.38
SPG7-221ENST00000569720 PIH1D1Q9NWS0 290 aaKnown RBP12.68□□□□□ -0.38
SPG7-221ENST00000569720 IRAK4Q9NWZ3 460 aa12.68□□□□□ -0.38
SPG7-221ENST00000569720 OR6C2Q9NZP2 312 aa12.68□□□□□ -0.38
SPG7-221ENST00000569720 SNX12Q9UMY4 172 aa12.68□□□□□ -0.38
SPG7-221ENST00000569720 MAP4K5Q9Y4K4 846 aa12.68□□□□□ -0.38
SPG7-221ENST00000569720 SAR1BQ9Y6B6 198 aa12.68□□□□□ -0.38
SPG7-221ENST00000569720 SHANK1Q9Y566 2161 aa12.68□□□□□ -0.38
SPG7-221ENST00000569720 ANKRD12Q6UB98 2062 aa12.68□□□□□ -0.38
SPG7-221ENST00000569720 HEATR9A2RTY3 570 aa12.67□□□□□ -0.38
SPG7-221ENST00000569720 MROH6A6NGR9 719 aa12.67□□□□□ -0.38
SPG7-221ENST00000569720 ERI2A8K979 691 aaKnown RBP12.67□□□□□ -0.38
SPG7-221ENST00000569720 PEX12O00623 359 aa12.67□□□□□ -0.38
SPG7-221ENST00000569720 FTCDO95954 541 aa12.67□□□□□ -0.38
SPG7-221ENST00000569720 CHRM5P08912 532 aaPredicted RBP12.67□□□□□ -0.38
SPG7-221ENST00000569720 PSMA3P25788 255 aa12.67□□□□□ -0.38
SPG7-221ENST00000569720 ACADLP28330 430 aa12.67□□□□□ -0.38
SPG7-221ENST00000569720 FOLR3P41439 243 aa12.67□□□□□ -0.38
SPG7-221ENST00000569720 DCDP81605 110 aaKnown RBP12.67□□□□□ -0.38
SPG7-221ENST00000569720 SSPNQ14714 243 aa12.67□□□□□ -0.38
SPG7-221ENST00000569720 INPP5JQ15735 1006 aaPredicted RBP12.67□□□□□ -0.38
SPG7-221ENST00000569720 KYNUQ16719 465 aa12.67□□□□□ -0.38
SPG7-221ENST00000569720 ZNF385CQ66K41 422 aaPredicted RBP12.67□□□□□ -0.38
SPG7-221ENST00000569720 RHBDD2Q6NTF9 364 aa12.67□□□□□ -0.38
SPG7-221ENST00000569720 TRIM73Q86UV7 250 aa12.67□□□□□ -0.38
SPG7-221ENST00000569720 TAB3Q8N5C8 712 aaPredicted RBP12.67□□□□□ -0.38
SPG7-221ENST00000569720 SLC35B2Q8TB61 432 aa12.67□□□□□ -0.38
SPG7-221ENST00000569720 PROKR1Q8TCW9 393 aa12.67□□□□□ -0.38
SPG7-221ENST00000569720 PNPLA2Q96AD5 504 aa12.67□□□□□ -0.38
SPG7-221ENST00000569720 FER1L6-AS2Q96M78 137 aa12.67□□□□□ -0.38
SPG7-221ENST00000569720 OR2A14Q96R47 310 aa12.67□□□□□ -0.38
SPG7-221ENST00000569720 TSSK1BQ9BXA7 367 aa12.67□□□□□ -0.38
SPG7-221ENST00000569720 AP1M1Q9BXS5 423 aa12.67□□□□□ -0.38
SPG7-221ENST00000569720 MFRPQ9BY79 579 aa12.67□□□□□ -0.38
SPG7-221ENST00000569720 FAM60AQ9NP50 221 aa12.67□□□□□ -0.38
SPG7-221ENST00000569720 C5AR2Q9P296 337 aa12.67□□□□□ -0.38
SPG7-221ENST00000569720 MAP10Q9P2G4 905 aa12.67□□□□□ -0.38
SPG7-221ENST00000569720 IFT80Q9P2H3 777 aaPredicted RBP12.67□□□□□ -0.38
SPG7-221ENST00000569720 NDOR1Q9UHB4 597 aa12.67□□□□□ -0.38
SPG7-221ENST00000569720 SRPK3Q9UPE1 567 aa12.67□□□□□ -0.38
SPG7-221ENST00000569720 PRSS21Q9Y6M0 314 aa12.67□□□□□ -0.38
SPG7-221ENST00000569720 ICE1Q9Y2F5 2266 aa12.66□□□□□ -0.38
SPG7-221ENST00000569720 SLC5A10A0PJK1 596 aa12.66□□□□□ -0.38
SPG7-221ENST00000569720 CCDC162PA2VCL2 907 aa12.66□□□□□ -0.38
SPG7-221ENST00000569720 OR51F1A6NGY5 319 aa12.66□□□□□ -0.38
SPG7-221ENST00000569720 ISM1B1AKI9 464 aa12.66□□□□□ -0.38
SPG7-221ENST00000569720 E7EVH7 732 aa12.66□□□□□ -0.38
SPG7-221ENST00000569720 ZSCAN9O15535 394 aaPredicted RBP12.66□□□□□ -0.38
SPG7-221ENST00000569720 RPN2P04844 631 aa12.66□□□□□ -0.38
SPG7-221ENST00000569720 ALPPP05187 535 aa12.66□□□□□ -0.38
SPG7-221ENST00000569720 CBSLP0DN79 551 aa12.66□□□□□ -0.38
SPG7-221ENST00000569720 STIP1P31948 543 aaKnown RBP12.66□□□□□ -0.38
SPG7-221ENST00000569720 FOXN2P32314 431 aa12.66□□□□□ -0.38
SPG7-221ENST00000569720 CBSP35520 551 aa12.66□□□□□ -0.38
SPG7-221ENST00000569720 FDFT1P37268 417 aa12.66□□□□□ -0.38
SPG7-221ENST00000569720 GDF10P55107 478 aa12.66□□□□□ -0.38
SPG7-221ENST00000569720 KLF1Q13351 362 aaPredicted RBP12.66□□□□□ -0.38
SPG7-221ENST00000569720 KIR2DS3Q14952 304 aa12.66□□□□□ -0.38
SPG7-221ENST00000569720 SLC5A12Q1EHB4 618 aa12.66□□□□□ -0.38
SPG7-221ENST00000569720 DEFB110Q30KQ9 67 aa12.66□□□□□ -0.38
SPG7-221ENST00000569720 CCDC38Q502W7 563 aa12.66□□□□□ -0.38
SPG7-221ENST00000569720 VWA5B1Q5TIE3 1220 aa12.66□□□□□ -0.38
SPG7-221ENST00000569720 C1orf189Q5VU69 101 aa12.66□□□□□ -0.38
SPG7-221ENST00000569720 TLDC1Q6P9B6 456 aa12.66□□□□□ -0.38
SPG7-221ENST00000569720 AFTPHQ6ULP2 937 aa12.66□□□□□ -0.38
SPG7-221ENST00000569720 SYT10Q6XYQ8 523 aa12.66□□□□□ -0.38
SPG7-221ENST00000569720 PPP1R21Q6ZMI0 780 aa12.66□□□□□ -0.38
SPG7-221ENST00000569720 MICALCLQ6ZW33 695 aa12.66□□□□□ -0.38
SPG7-221ENST00000569720 CLEC1AQ8NC01 280 aa12.66□□□□□ -0.38
SPG7-221ENST00000569720 OR52K1Q8NGK4 314 aa12.66□□□□□ -0.38
SPG7-221ENST00000569720 ACTRT1Q8TDG2 376 aa12.66□□□□□ -0.38
SPG7-221ENST00000569720 C16orf45Q96MC5 204 aaPredicted RBP12.66□□□□□ -0.38
SPG7-221ENST00000569720 SMAD5Q99717 465 aaKnown RBP12.66□□□□□ -0.38
SPG7-221ENST00000569720 NDC1Q9BTX1 674 aa12.66□□□□□ -0.38
SPG7-221ENST00000569720 SPRTNQ9H040 489 aaPredicted RBP12.66□□□□□ -0.38
SPG7-221ENST00000569720 SPHK1Q9NYA1 384 aa12.66□□□□□ -0.38
SPG7-221ENST00000569720 PACSIN2Q9UNF0 486 aaPredicted RBP12.66□□□□□ -0.38
SPG7-221ENST00000569720 PLCL2Q9UPR0 1127 aa12.66□□□□□ -0.38
SPG7-221ENST00000569720 R3HDM2Q9Y2K5 976 aaKnown RBP12.66□□□□□ -0.38
SPG7-221ENST00000569720 PTRH2Q9Y3E5 179 aaKnown RBP12.66□□□□□ -0.38
SPG7-221ENST00000569720 KLF7O75840 302 aaPredicted RBP12.65□□□□□ -0.38
SPG7-221ENST00000569720 PAFAH1B1P43034 410 aa12.65□□□□□ -0.38
SPG7-221ENST00000569720 RAPSNQ13702 412 aa12.65□□□□□ -0.38
SPG7-221ENST00000569720 ZIC1Q15915 447 aa12.65□□□□□ -0.38
SPG7-221ENST00000569720 C4orf17Q53FE4 359 aa12.65□□□□□ -0.38
SPG7-221ENST00000569720 FASTKD1Q53R41 847 aaKnown RBP12.65□□□□□ -0.38
SPG7-221ENST00000569720 DNAJC21Q5F1R6 531 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms