RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 SNX7Q9UNH6 387 aa13.36□□□□□ -0.27
GTF3C1-211ENST00000569653 TDRKHQ9Y2W6 561 aaKnown RBP13.36□□□□□ -0.27
GTF3C1-211ENST00000569653 TCAF1Q9Y4C2 921 aa13.36□□□□□ -0.27
GTF3C1-211ENST00000569653 TEX15Q9BXT5 2789 aa13.36□□□□□ -0.27
GTF3C1-211ENST00000569653 HEATR5BQ9P2D3 2071 aa13.35□□□□□ -0.27
GTF3C1-211ENST00000569653 HEATR9A2RTY3 570 aa13.35□□□□□ -0.27
GTF3C1-211ENST00000569653 ERI2A8K979 691 aaKnown RBP13.35□□□□□ -0.27
GTF3C1-211ENST00000569653 E7EQ34 232 aa13.35□□□□□ -0.27
GTF3C1-211ENST00000569653 GPC4O75487 556 aa13.35□□□□□ -0.27
GTF3C1-211ENST00000569653 TMEM63AO94886 807 aa13.35□□□□□ -0.27
GTF3C1-211ENST00000569653 FTH1P02794 183 aa13.35□□□□□ -0.27
GTF3C1-211ENST00000569653 KLK3P07288 261 aaPredicted RBP13.35□□□□□ -0.27
GTF3C1-211ENST00000569653 ATXN8OSP0DMR3 200 aa13.35□□□□□ -0.27
GTF3C1-211ENST00000569653 ADRA1DP25100 572 aa13.35□□□□□ -0.27
GTF3C1-211ENST00000569653 PKLRP30613 574 aa13.35□□□□□ -0.27
GTF3C1-211ENST00000569653 SHMT2P34897 504 aa13.35□□□□□ -0.27
GTF3C1-211ENST00000569653 RPS6KA1Q15418 735 aa13.35□□□□□ -0.27
GTF3C1-211ENST00000569653 C1orf189Q5VU69 101 aa13.35□□□□□ -0.27
GTF3C1-211ENST00000569653 AFTPHQ6ULP2 937 aa13.35□□□□□ -0.27
GTF3C1-211ENST00000569653 LINC00523Q86TU6 105 aa13.35□□□□□ -0.27
GTF3C1-211ENST00000569653 TBC1D21Q8IYX1 336 aa13.35□□□□□ -0.27
GTF3C1-211ENST00000569653 SLC22A15Q8IZD6 547 aa13.35□□□□□ -0.27
GTF3C1-211ENST00000569653 DNAJC22Q8N4W6 341 aa13.35□□□□□ -0.27
GTF3C1-211ENST00000569653 DNAAF3Q8N9W5 541 aa13.35□□□□□ -0.27
GTF3C1-211ENST00000569653 TRIM58Q8NG06 486 aa13.35□□□□□ -0.27
GTF3C1-211ENST00000569653 LRRC45Q96CN5 670 aa13.35□□□□□ -0.27
GTF3C1-211ENST00000569653 IL17FQ96PD4 163 aa13.35□□□□□ -0.27
GTF3C1-211ENST00000569653 SLC25A23Q9BV35 468 aa13.35□□□□□ -0.27
GTF3C1-211ENST00000569653 AP1M1Q9BXS5 423 aa13.35□□□□□ -0.27
GTF3C1-211ENST00000569653 FANCEQ9HB96 536 aa13.35□□□□□ -0.27
GTF3C1-211ENST00000569653 SYTL2Q9HCH5 934 aa13.35□□□□□ -0.27
GTF3C1-211ENST00000569653 CHRAC1Q9NRG0 131 aa13.35□□□□□ -0.27
GTF3C1-211ENST00000569653 DHCR7Q9UBM7 475 aaKnown RBP13.35□□□□□ -0.27
GTF3C1-211ENST00000569653 RIMKLBQ9ULI2 386 aa13.35□□□□□ -0.27
GTF3C1-211ENST00000569653 PCDHGA9Q9Y5G4 932 aaKnown RBP13.35□□□□□ -0.27
GTF3C1-211ENST00000569653 CNTRLQ7Z7A1 2325 aa13.34□□□□□ -0.27
GTF3C1-211ENST00000569653 A0A0J9YY10 115 aa13.34□□□□□ -0.27
GTF3C1-211ENST00000569653 NRP2O60462 931 aa13.34□□□□□ -0.27
GTF3C1-211ENST00000569653 RNF224P0DH78 156 aa13.34□□□□□ -0.27
GTF3C1-211ENST00000569653 ARNTP27540 789 aa13.34□□□□□ -0.27
GTF3C1-211ENST00000569653 STIP1P31948 543 aaKnown RBP13.34□□□□□ -0.27
GTF3C1-211ENST00000569653 FDFT1P37268 417 aa13.34□□□□□ -0.27
GTF3C1-211ENST00000569653 PGDP52209 483 aa13.34□□□□□ -0.27
GTF3C1-211ENST00000569653 SLC9A5Q14940 896 aa13.34□□□□□ -0.27
GTF3C1-211ENST00000569653 CCSMST1Q4G0I0 132 aa13.34□□□□□ -0.27
GTF3C1-211ENST00000569653 MEI1Q5TIA1 1274 aa13.34□□□□□ -0.27
GTF3C1-211ENST00000569653 PPP1R21Q6ZMI0 780 aa13.34□□□□□ -0.27
GTF3C1-211ENST00000569653 MRGPREQ86SM8 312 aa13.34□□□□□ -0.27
GTF3C1-211ENST00000569653 DTWD1Q8N5C7 304 aa13.34□□□□□ -0.27
GTF3C1-211ENST00000569653 C2orf73Q8N5S3 287 aaPredicted RBP13.34□□□□□ -0.27
GTF3C1-211ENST00000569653 RBMXL3Q8N7X1 1067 aaKnown RBP13.34□□□□□ -0.27
GTF3C1-211ENST00000569653 OR4L1Q8NH43 312 aa13.34□□□□□ -0.27
GTF3C1-211ENST00000569653 SEC14L1Q92503 715 aa13.34□□□□□ -0.27
GTF3C1-211ENST00000569653 FRMD8P1Q9BZ68 369 aaPredicted RBP13.34□□□□□ -0.27
GTF3C1-211ENST00000569653 CHRNA10Q9GZZ6 450 aa13.34□□□□□ -0.27
GTF3C1-211ENST00000569653 P2RY12Q9H244 342 aa13.34□□□□□ -0.27
GTF3C1-211ENST00000569653 ACSS2Q9NR19 701 aa13.34□□□□□ -0.27
GTF3C1-211ENST00000569653 TREX1Q9NSU2 369 aa13.34□□□□□ -0.27
GTF3C1-211ENST00000569653 OR6C2Q9NZP2 312 aa13.34□□□□□ -0.27
GTF3C1-211ENST00000569653 SERTAD3Q9UJW9 196 aa13.34□□□□□ -0.27
GTF3C1-211ENST00000569653 ZNF148Q9UQR1 794 aa13.34□□□□□ -0.27
GTF3C1-211ENST00000569653 RUVBL2Q9Y230 463 aaKnown RBP13.34□□□□□ -0.27
GTF3C1-211ENST00000569653 PPP2R2CQ9Y2T4 447 aa13.34□□□□□ -0.27
GTF3C1-211ENST00000569653 UNC79Q9P2D8 2635 aa13.33□□□□□ -0.28
GTF3C1-211ENST00000569653 TCRBV7S3A2A0A539 114 aa13.33□□□□□ -0.28
GTF3C1-211ENST00000569653 ZNF185O15231 689 aa13.33□□□□□ -0.28
GTF3C1-211ENST00000569653 OR2B3O76000 313 aa13.33□□□□□ -0.28
GTF3C1-211ENST00000569653 APRTP07741 180 aa13.33□□□□□ -0.28
GTF3C1-211ENST00000569653 UMODP07911 640 aa13.33□□□□□ -0.28
GTF3C1-211ENST00000569653 OR56A5P0C7T3 313 aa13.33□□□□□ -0.28
GTF3C1-211ENST00000569653 MAGP20916 626 aa13.33□□□□□ -0.28
GTF3C1-211ENST00000569653 AOAHP28039 575 aa13.33□□□□□ -0.28
GTF3C1-211ENST00000569653 NMBRP28336 390 aa13.33□□□□□ -0.28
GTF3C1-211ENST00000569653 HSPA14Q0VDF9 509 aa13.33□□□□□ -0.28
GTF3C1-211ENST00000569653 RAPSNQ13702 412 aa13.33□□□□□ -0.28
GTF3C1-211ENST00000569653 KYNUQ16719 465 aa13.33□□□□□ -0.28
GTF3C1-211ENST00000569653 SYTL3Q4VX76 610 aa13.33□□□□□ -0.28
GTF3C1-211ENST00000569653 FCRL6Q6DN72 434 aa13.33□□□□□ -0.28
GTF3C1-211ENST00000569653 RHBDD2Q6NTF9 364 aa13.33□□□□□ -0.28
GTF3C1-211ENST00000569653 TAX1BP1Q86VP1 789 aa13.33□□□□□ -0.28
GTF3C1-211ENST00000569653 ZNF655Q8N720 491 aaPredicted RBP13.33□□□□□ -0.28
GTF3C1-211ENST00000569653 OR6P1Q8NGX9 317 aa13.33□□□□□ -0.28
GTF3C1-211ENST00000569653 TCTN2Q96GX1 697 aa13.33□□□□□ -0.28
GTF3C1-211ENST00000569653 SGSM3Q96HU1 749 aa13.33□□□□□ -0.28
GTF3C1-211ENST00000569653 CENPEQ02224 2701 aa13.32□□□□□ -0.28
GTF3C1-211ENST00000569653 A6NL46 340 aa13.32□□□□□ -0.28
GTF3C1-211ENST00000569653 ISM1B1AKI9 464 aa13.32□□□□□ -0.28
GTF3C1-211ENST00000569653 ZSCAN9O15535 394 aaPredicted RBP13.32□□□□□ -0.28
GTF3C1-211ENST00000569653 PRICKLE3O43900 615 aaPredicted RBP13.32□□□□□ -0.28
GTF3C1-211ENST00000569653 SLCO2B1O94956 709 aa13.32□□□□□ -0.28
GTF3C1-211ENST00000569653 MED26O95402 600 aa13.32□□□□□ -0.28
GTF3C1-211ENST00000569653 GNLYP22749 145 aa13.32□□□□□ -0.28
GTF3C1-211ENST00000569653 OTX2P32243 289 aa13.32□□□□□ -0.28
GTF3C1-211ENST00000569653 KCNJ1P48048 391 aa13.32□□□□□ -0.28
GTF3C1-211ENST00000569653 RAB28P51157 221 aa13.32□□□□□ -0.28
GTF3C1-211ENST00000569653 SESN2P58004 480 aaPredicted RBP13.32□□□□□ -0.28
GTF3C1-211ENST00000569653 YBX1P67809 324 aaKnown RBP13.32□□□□□ -0.28
GTF3C1-211ENST00000569653 SLC5A12Q1EHB4 618 aa13.32□□□□□ -0.28
GTF3C1-211ENST00000569653 DNAJC21Q5F1R6 531 aaKnown RBP13.32□□□□□ -0.28
GTF3C1-211ENST00000569653 CTSL3PQ5NE16 218 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms