RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 ZNF148Q9UQR1 794 aa17.97■□□□□ 0.47
LINC01238-205ENST00000567549 REXO2Q9Y3B8 237 aaKnown RBP17.97■□□□□ 0.47
LINC01238-205ENST00000567549 NAV2Q8IVL1 2488 aa17.97■□□□□ 0.47
LINC01238-205ENST00000567549 SLC5A10A0PJK1 596 aa17.96■□□□□ 0.47
LINC01238-205ENST00000567549 ZNF185O15231 689 aa17.96■□□□□ 0.47
LINC01238-205ENST00000567549 KRT86O43790 486 aa17.96■□□□□ 0.47
LINC01238-205ENST00000567549 SUN1O94901 812 aa17.96■□□□□ 0.47
LINC01238-205ENST00000567549 FTCDO95954 541 aa17.96■□□□□ 0.47
LINC01238-205ENST00000567549 IFNB1P01574 187 aa17.96■□□□□ 0.47
LINC01238-205ENST00000567549 PVRP15151 417 aa17.96■□□□□ 0.47
LINC01238-205ENST00000567549 TTPAP49638 278 aa17.96■□□□□ 0.47
LINC01238-205ENST00000567549 RAB28P51157 221 aa17.96■□□□□ 0.47
LINC01238-205ENST00000567549 BRD3Q15059 726 aa17.96■□□□□ 0.47
LINC01238-205ENST00000567549 ZC3H12BQ5HYM0 836 aaKnown RBP17.96■□□□□ 0.47
LINC01238-205ENST00000567549 TSTD2Q5T7W7 516 aa17.96■□□□□ 0.47
LINC01238-205ENST00000567549 MLIPQ5VWP3 458 aa17.96■□□□□ 0.47
LINC01238-205ENST00000567549 UNC5DQ6UXZ4 953 aa17.96■□□□□ 0.47
LINC01238-205ENST00000567549 PANX3Q96QZ0 392 aa17.96■□□□□ 0.47
LINC01238-205ENST00000567549 OR2A14Q96R47 310 aa17.96■□□□□ 0.47
LINC01238-205ENST00000567549 SMAD5Q99717 465 aaKnown RBP17.96■□□□□ 0.47
LINC01238-205ENST00000567549 CARD6Q9BX69 1037 aa17.96■□□□□ 0.47
LINC01238-205ENST00000567549 KLHL25Q9H0H3 589 aa17.96■□□□□ 0.47
LINC01238-205ENST00000567549 CUEDC1Q9NWM3 386 aaPredicted RBP17.96■□□□□ 0.47
LINC01238-205ENST00000567549 PAK5Q9P286 719 aa17.96■□□□□ 0.47
LINC01238-205ENST00000567549 LRRK2Q5S007 2527 aa17.96■□□□□ 0.47
LINC01238-205ENST00000567549 CCDC162PA2VCL2 907 aa17.95■□□□□ 0.46
LINC01238-205ENST00000567549 DDX3YO15523 660 aaKnown RBP17.95■□□□□ 0.46
LINC01238-205ENST00000567549 SORBS2O94875 1100 aaKnown RBP17.95■□□□□ 0.46
LINC01238-205ENST00000567549 S1PR4O95977 384 aa17.95■□□□□ 0.46
LINC01238-205ENST00000567549 PDGFAP04085 211 aa17.95■□□□□ 0.46
LINC01238-205ENST00000567549 OTX2P32243 289 aa17.95■□□□□ 0.46
LINC01238-205ENST00000567549 GDF10P55107 478 aa17.95■□□□□ 0.46
LINC01238-205ENST00000567549 NAA25Q14CX7 972 aa17.95■□□□□ 0.46
LINC01238-205ENST00000567549 CYP2A13Q16696 494 aa17.95■□□□□ 0.46
LINC01238-205ENST00000567549 PRAMEF17Q5VTA0 474 aa17.95■□□□□ 0.46
LINC01238-205ENST00000567549 IRAK1BP1Q5VVH5 260 aa17.95■□□□□ 0.46
LINC01238-205ENST00000567549 YOD1Q5VVQ6 348 aaPredicted RBP17.95■□□□□ 0.46
LINC01238-205ENST00000567549 JMJD6Q6NYC1 403 aaPredicted RBP17.95■□□□□ 0.46
LINC01238-205ENST00000567549 DCUN1D3Q8IWE4 304 aa17.95■□□□□ 0.46
LINC01238-205ENST00000567549 SLC22A15Q8IZD6 547 aa17.95■□□□□ 0.46
LINC01238-205ENST00000567549 MPP5Q8N3R9 675 aa17.95■□□□□ 0.46
LINC01238-205ENST00000567549 MAGEC3Q8TD91 643 aa17.95■□□□□ 0.46
LINC01238-205ENST00000567549 HDAC10Q969S8 669 aa17.95■□□□□ 0.46
LINC01238-205ENST00000567549 PTERQ96BW5 349 aa17.95■□□□□ 0.46
LINC01238-205ENST00000567549 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.95■□□□□ 0.46
LINC01238-205ENST00000567549 PACSIN2Q9UNF0 486 aaPredicted RBP17.95■□□□□ 0.46
LINC01238-205ENST00000567549 PTRH2Q9Y3E5 179 aaKnown RBP17.95■□□□□ 0.46
LINC01238-205ENST00000567549 MAP4K5Q9Y4K4 846 aa17.95■□□□□ 0.46
LINC01238-205ENST00000567549 TNRC6AQ8NDV7 1962 aaKnown RBP17.94■□□□□ 0.46
LINC01238-205ENST00000567549 LIASO43766 372 aa17.94■□□□□ 0.46
LINC01238-205ENST00000567549 GOT2P00505 430 aaKnown RBP17.94■□□□□ 0.46
LINC01238-205ENST00000567549 CAPN1P07384 714 aa17.94■□□□□ 0.46
LINC01238-205ENST00000567549 ITGAXP20702 1163 aa17.94■□□□□ 0.46
LINC01238-205ENST00000567549 HSPA14Q0VDF9 509 aa17.94■□□□□ 0.46
LINC01238-205ENST00000567549 ATP1A4Q13733 1029 aa17.94■□□□□ 0.46
LINC01238-205ENST00000567549 KYNUQ16719 465 aa17.94■□□□□ 0.46
LINC01238-205ENST00000567549 NADK2Q4G0N4 442 aa17.94■□□□□ 0.46
LINC01238-205ENST00000567549 CCDC38Q502W7 563 aa17.94■□□□□ 0.46
LINC01238-205ENST00000567549 TCTE1Q5JU00 501 aa17.94■□□□□ 0.46
LINC01238-205ENST00000567549 MRGPREQ86SM8 312 aa17.94■□□□□ 0.46
LINC01238-205ENST00000567549 LRRC6Q86X45 466 aa17.94■□□□□ 0.46
LINC01238-205ENST00000567549 IQCKQ8N0W5 287 aa17.94■□□□□ 0.46
LINC01238-205ENST00000567549 ZBTB2Q8N680 514 aa17.94■□□□□ 0.46
LINC01238-205ENST00000567549 FDCSPQ8NFU4 85 aa17.94■□□□□ 0.46
LINC01238-205ENST00000567549 OR2Y1Q8NGV0 311 aa17.94■□□□□ 0.46
LINC01238-205ENST00000567549 MAIP1Q8WWC4 291 aa17.94■□□□□ 0.46
LINC01238-205ENST00000567549 FOPNLQ96NB1 174 aa17.94■□□□□ 0.46
LINC01238-205ENST00000567549 ETNK1Q9HBU6 452 aa17.94■□□□□ 0.46
LINC01238-205ENST00000567549 RAB6BQ9NRW1 208 aa17.94■□□□□ 0.46
LINC01238-205ENST00000567549 IL1RAPL1Q9NZN1 696 aa17.94■□□□□ 0.46
LINC01238-205ENST00000567549 MAP10Q9P2G4 905 aa17.94■□□□□ 0.46
LINC01238-205ENST00000567549 SLC39A10Q9ULF5 831 aa17.94■□□□□ 0.46
LINC01238-205ENST00000567549 MED13Q9UHV7 2174 aa17.94■□□□□ 0.46
LINC01238-205ENST00000567549 FLNCQ14315 2725 aa17.93■□□□□ 0.46
LINC01238-205ENST00000567549 A6NL46 340 aa17.93■□□□□ 0.46
LINC01238-205ENST00000567549 APRTP07741 180 aa17.93■□□□□ 0.46
LINC01238-205ENST00000567549 PRSS56P0CW18 603 aa17.93■□□□□ 0.46
LINC01238-205ENST00000567549 ACVR1Q04771 509 aa17.93■□□□□ 0.46
LINC01238-205ENST00000567549 INPP5JQ15735 1006 aaPredicted RBP17.93■□□□□ 0.46
LINC01238-205ENST00000567549 ZNF385CQ66K41 422 aaPredicted RBP17.93■□□□□ 0.46
LINC01238-205ENST00000567549 LCN10Q6JVE6 187 aa17.93■□□□□ 0.46
LINC01238-205ENST00000567549 TAB3Q8N5C8 712 aaPredicted RBP17.93■□□□□ 0.46
LINC01238-205ENST00000567549 OR13J1Q8NGT2 312 aa17.93■□□□□ 0.46
LINC01238-205ENST00000567549 COG1Q8WTW3 980 aa17.93■□□□□ 0.46
LINC01238-205ENST00000567549 FKBP10Q96AY3 582 aa17.93■□□□□ 0.46
LINC01238-205ENST00000567549 GBP5Q96PP8 586 aa17.93■□□□□ 0.46
LINC01238-205ENST00000567549 CATSPERZQ9NTU4 200 aa17.93■□□□□ 0.46
LINC01238-205ENST00000567549 PIH1D1Q9NWS0 290 aaKnown RBP17.93■□□□□ 0.46
LINC01238-205ENST00000567549 GNPTGQ9UJJ9 305 aa17.93■□□□□ 0.46
LINC01238-205ENST00000567549 NXT1Q9UKK6 140 aaKnown RBP17.93■□□□□ 0.46
LINC01238-205ENST00000567549 R3HDM2Q9Y2K5 976 aaKnown RBP17.93■□□□□ 0.46
LINC01238-205ENST00000567549 TCAF1Q9Y4C2 921 aa17.93■□□□□ 0.46
LINC01238-205ENST00000567549 PRSS21Q9Y6M0 314 aa17.93■□□□□ 0.46
LINC01238-205ENST00000567549 BHMG1C9JSJ3 638 aaPredicted RBP17.92■□□□□ 0.46
LINC01238-205ENST00000567549 PRMT5O14744 637 aaPredicted RBP17.92■□□□□ 0.46
LINC01238-205ENST00000567549 NRDCO43847 1150 aa17.92■□□□□ 0.46
LINC01238-205ENST00000567549 CD9P21926 228 aa17.92■□□□□ 0.46
LINC01238-205ENST00000567549 PKLRP30613 574 aa17.92■□□□□ 0.46
LINC01238-205ENST00000567549 MYBPC3Q14896 1274 aa17.92■□□□□ 0.46
LINC01238-205ENST00000567549 NKAIN1Q4KMZ8 207 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms