RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 PDE9AO76083 593 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 CDK14O94921 469 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 VNN2O95498 520 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 ALPIP09923 528 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 FUT1P19526 365 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 EIF2S2P20042 333 aaKnown RBP3.01□□□□□ -1.93
CHD9-216ENST00000565803 ACHEP22303 614 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 CFL1P23528 166 aaKnown RBP3.01□□□□□ -1.93
CHD9-216ENST00000565803 SLC6A6P31641 620 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 VIPR1P32241 457 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 BSGP35613 385 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 GSTM5P46439 218 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 SLC6A12P48065 614 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 SLC11A2P49281 568 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 ARL4DP49703 201 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 SERPINB9P50453 376 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 HSF2Q03933 536 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 PMS2P3Q13401 168 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 PIGHQ14442 188 aaPredicted RBP3.01□□□□□ -1.93
CHD9-216ENST00000565803 DLG2Q15700 870 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 SSX2Q16385 188 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 SLC18A3Q16572 532 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 USP41Q3LFD5 358 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 MLIPQ5VWP3 458 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 FAM91A1Q658Y4 838 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 GRAMD4Q6IC98 578 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 SLFN12LQ6IEE8 588 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 ZSCAN25Q6NSZ9 544 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 ARSKQ6UWY0 536 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 ZDHHC24Q6UX98 284 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 ZNF410Q86VK4 478 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 CLEC4FQ8N1N0 589 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 PYROXD2Q8N2H3 581 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 BBS10Q8TAM1 723 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 ACOT11Q8WXI4 607 aaPredicted RBP3.01□□□□□ -1.93
CHD9-216ENST00000565803 SLC7A6OSQ96CW6 309 aaPredicted RBP3.01□□□□□ -1.93
CHD9-216ENST00000565803 PWWP2AQ96N64 755 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 SIN3AQ96ST3 1273 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 ZNF559Q9BR84 538 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 IRX2Q9BZI1 471 aaPredicted RBP3.01□□□□□ -1.93
CHD9-216ENST00000565803 TMEM245Q9H330 911 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 GREM2Q9H772 168 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 ROPN1Q9HAT0 212 aaPredicted RBP3.01□□□□□ -1.93
CHD9-216ENST00000565803 ZNF160Q9HCG1 818 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 CCNB1IP1Q9NPC3 277 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 TIMMDC1Q9NPL8 285 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 VSX1Q9NZR4 365 aaPredicted RBP3.01□□□□□ -1.93
CHD9-216ENST00000565803 PTGFRNQ9P2B2 879 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 DNPEPQ9ULA0 475 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 PHF24Q9UPV7 400 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 RCE1Q9Y256 329 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 PRG3Q9Y2Y8 225 aaPredicted RBP3.01□□□□□ -1.93
CHD9-216ENST00000565803 PATJQ8NI35 1801 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 GRIN2DO15399 1336 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 ASTN2O75129 1339 aaPredicted RBP3.01□□□□□ -1.93
CHD9-216ENST00000565803 SALL3Q9BXA9 1300 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 CDK5RAP2Q96SN8 1893 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 CYP3A7-CYP3A51PA0A087WV96 503 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 A0A1B0GW15 77 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 A0A1W2PRX2 142 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 TYW5A2RUC4 315 aaKnown RBP3.01□□□□□ -1.93
CHD9-216ENST00000565803 OR2A25A4D2G3 310 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 FAM187AA6NFU0 413 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 LRRC53A6NM62 1247 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 WASH4PA8MWX3 477 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 H3BQV1 296 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 PGRMC1O00264 195 aaKnown RBP3.01□□□□□ -1.93
CHD9-216ENST00000565803 FGBP02675 491 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 PNMTP11086 282 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 G6PDP11413 515 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 COX7A2P14406 83 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 SNRPBP14678 240 aaKnown RBP3.01□□□□□ -1.93
CHD9-216ENST00000565803 IL1R1P14778 569 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 HNF1AP20823 631 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 SYT1P21579 422 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 CYP3A7P24462 503 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 MST1P26927 711 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 GABRB3P28472 473 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 CCND2P30279 289 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 THBS4P35443 961 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 FHITP49789 147 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 NKX6-1P78426 367 aaPredicted RBP3.01□□□□□ -1.93
CHD9-216ENST00000565803 COL9A3Q14050 684 aaPredicted RBP3.01□□□□□ -1.93
CHD9-216ENST00000565803 DGCR6Q14129 220 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 ALKBH6Q3KRA9 238 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 C6orf10Q5SRN2 563 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 THEM4Q5T1C6 240 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 ZNF385CQ66K41 422 aaPredicted RBP3.01□□□□□ -1.93
CHD9-216ENST00000565803 DGAT2L7PQ6IED9 249 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 MRNIPQ6NTE8 343 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 SYT10Q6XYQ8 523 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 C1orf186Q6ZWK4 172 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 FAM35AQ86V20 835 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 NKAIN4Q8IVV8 208 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 TMEFF1Q8IYR6 380 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 PQLC1Q8N2U9 271 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 GPR137CQ8N3F9 429 aa3.01□□□□□ -1.93
CHD9-216ENST00000565803 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.01□□□□□ -1.93
CHD9-216ENST00000565803 TP53I13Q8NBR0 393 aaPredicted RBP3.01□□□□□ -1.93
CHD9-216ENST00000565803 CMASQ8NFW8 434 aaPredicted RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms