RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 ABOP16442 354 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 AMPD1P23109 780 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 SERPINB6P35237 376 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 CARSP49589 748 aaKnown RBP8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 ARSFP54793 590 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 HADHBP55084 474 aaKnown RBP8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 DSC2Q02487 901 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 CACNG1Q06432 222 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 NFE2L1Q14494 772 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 NKG7Q16617 165 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 KHDC1Q4VXA5 237 aaKnown RBP8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 ALG1LQ6GMV1 187 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 FAM83HQ6ZRV2 1179 aaPredicted RBP8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 TMC3Q7Z5M5 1100 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 DOLPP1Q86YN1 238 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 TMEM139Q8IV31 216 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 TMEM151BQ8IW70 566 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 ACVR1CQ8NER5 493 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 LILRB4Q8NHJ6 448 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 DLG3Q92796 817 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 EID2BQ96D98 161 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 GPR137Q96N19 417 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 POLDIP3Q9BY77 421 aaKnown RBP8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 GPR63Q9BZJ6 419 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 CHRNA10Q9GZZ6 450 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 SLC26A1Q9H2B4 701 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 ZNF160Q9HCG1 818 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 MAGEE1Q9HCI5 957 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 RBM22Q9NW64 420 aaKnown RBP eCLIP8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 NFKBIL1Q9UBC1 381 aaPredicted RBP8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 IP6K2Q9UHH9 426 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 TTLL3Q9Y4R7 772 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 PCDHA13Q9Y5I0 950 aa8.69□□□□□ -1.02
VPS9D1-205ENST00000565452 MGAT4DA6NG13 374 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 BTNL10A8MVZ5 291 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 H3BMH7 237 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 BTN3A3O00478 584 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 PJA2O43164 708 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 WISP2O76076 250 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 SLCO2B1O94956 709 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 BMP10O95393 424 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 WDPCPO95876 746 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 ONECUT2O95948 504 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 F10P00742 488 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 SLC35G4P0C7Q5 338 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 PRR35P0CG20 571 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 PVRP15151 417 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 PSMA2P25787 234 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 SOX11P35716 441 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 AP2B1P63010 937 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 ALDH6A1Q02252 535 aaKnown RBP8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 OLIG2Q13516 323 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 IHHQ14623 411 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 IFI16Q16666 785 aaKnown RBP8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 TMEM211Q6ICI0 200 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 ZNF662Q6ZS27 426 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 NDUFAF7Q7L592 441 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 CLYBLQ8N0X4 340 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 NIPA2Q8N8Q9 360 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 RASGEF1AQ8N9B8 481 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 SLC35G2Q8TBE7 412 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 ARRDC2Q8TBH0 407 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 BRIX1Q8TDN6 353 aaKnown RBP8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 PSMF1Q92530 271 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 MBD6Q96DN6 1003 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 RMND5BQ96G75 393 aaPredicted RBP8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 FERD3LQ96RJ6 166 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 SRPK1Q96SB4 655 aaKnown RBP8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 DMRTA2Q96SC8 542 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 CCM2Q9BSQ5 444 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 RNF32Q9H0A6 362 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 THAP2Q9H0W7 228 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 FAM60AQ9NP50 221 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 SLC22A11Q9NSA0 550 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 SPTLC3Q9NUV7 552 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 ETNK2Q9NVF9 386 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 IL1RAPL1Q9NZN1 696 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 CTTNBP2NLQ9P2B4 639 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 MYO1AQ9UBC5 1043 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 TMPRSS11EQ9UL52 423 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 SHOC2Q9UQ13 582 aa8.68□□□□□ -1.02
VPS9D1-205ENST00000565452 NSG1A0A0A6YYJ2 146 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 OR5H15A6NDH6 313 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 SOWAHDA6NJG2 315 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 NPIPA5E9PKD4 350 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 BTN3A1O00481 513 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 MAP2K7O14733 419 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 MATN3O15232 486 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 TTI1O43156 1089 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 ASNA1O43681 348 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 CTAG2O75638 210 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 SERPINA7P05543 415 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 ICAM2P13598 275 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 ACPPP15309 386 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 FLNAP21333 2647 aaKnown RBP8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 MSX1P28360 303 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 MIPP30301 263 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 CHRNB4P30926 498 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 PCK1P35558 622 aa8.67□□□□□ -1.02
VPS9D1-205ENST00000565452 SPAM1P38567 509 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms