RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 VPS26AO75436 327 aa20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 IGLV3-25P01717 112 aa20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 CCDC159P0C7I6 412 aa20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 BMP1P13497 986 aa20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 CDKN2CP42773 168 aa20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 TBX4P57082 545 aa20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 MRPS15P82914 257 aaKnown RBP20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 ZNF404Q494X3 552 aa20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 XKR4Q5GH76 650 aa20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 SUSD1Q6UWL2 747 aa20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 BHMTQ93088 406 aa20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 TPD52L3Q96J77 140 aa20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 POLR1EQ9GZS1 481 aaKnown RBP20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 TNKS2Q9H2K2 1166 aa20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 TAS2R16Q9NYV7 291 aa20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 IFT52Q9Y366 437 aa20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 LOC285095A0A1B0GVY8 99 aa20.05■□□□□ 0.8
MAP1LC3B-206ENST00000564844 SLC12A8A0AV02 714 aa20.05■□□□□ 0.8
MAP1LC3B-206ENST00000564844 TSPAN12O95859 305 aa20.05■□□□□ 0.8
MAP1LC3B-206ENST00000564844 MC4RP32245 332 aa20.05■□□□□ 0.8
MAP1LC3B-206ENST00000564844 ZNF135P52742 658 aaPredicted RBP20.05■□□□□ 0.8
MAP1LC3B-206ENST00000564844 GTF2H2Q13888 395 aa20.05■□□□□ 0.8
MAP1LC3B-206ENST00000564844 CPSF6Q16630 551 aaKnown RBP eCLIP20.05■□□□□ 0.85e-6■■□□□ 13.1
MAP1LC3B-206ENST00000564844 GTF2H2CQ6P1K8 395 aa20.05■□□□□ 0.8
MAP1LC3B-206ENST00000564844 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.05■□□□□ 0.8
MAP1LC3B-206ENST00000564844 RASAL3Q86YV0 1011 aa20.05■□□□□ 0.8
MAP1LC3B-206ENST00000564844 METTL4Q8N3J2 472 aa20.05■□□□□ 0.8
MAP1LC3B-206ENST00000564844 SVOPLQ8N434 492 aa20.05■□□□□ 0.8
MAP1LC3B-206ENST00000564844 KCNC2Q96PR1 638 aa20.05■□□□□ 0.8
MAP1LC3B-206ENST00000564844 DPH2Q9BQC3 489 aaPredicted RBP20.05■□□□□ 0.8
MAP1LC3B-206ENST00000564844 BEX2Q9BXY8 128 aa20.05■□□□□ 0.8
MAP1LC3B-206ENST00000564844 OR51E2Q9H255 320 aa20.05■□□□□ 0.8
MAP1LC3B-206ENST00000564844 TBC1D14Q9P2M4 693 aa20.05■□□□□ 0.8
MAP1LC3B-206ENST00000564844 AFF4Q9UHB7 1163 aaKnown RBP20.05■□□□□ 0.8
MAP1LC3B-206ENST00000564844 RRN3P2A6NIE6 340 aa20.05■□□□□ 0.8
MAP1LC3B-206ENST00000564844 A8MX80 341 aa20.05■□□□□ 0.8
MAP1LC3B-206ENST00000564844 OR7A17O14581 309 aa20.05■□□□□ 0.8
MAP1LC3B-206ENST00000564844 KRT8P05787 483 aa20.05■□□□□ 0.8
MAP1LC3B-206ENST00000564844 PKMP14618 531 aaKnown RBP20.05■□□□□ 0.8
MAP1LC3B-206ENST00000564844 GJA5P36382 358 aa20.05■□□□□ 0.8
MAP1LC3B-206ENST00000564844 CASP3P42574 277 aa20.05■□□□□ 0.8
MAP1LC3B-206ENST00000564844 PHC1P78364 1004 aa20.05■□□□□ 0.8
MAP1LC3B-206ENST00000564844 ZNF792Q3KQV3 632 aa20.05■□□□□ 0.8
MAP1LC3B-206ENST00000564844 SLC39A12Q504Y0 691 aa20.05■□□□□ 0.8
MAP1LC3B-206ENST00000564844 TPRG1LQ5T0D9 272 aa20.05■□□□□ 0.8
MAP1LC3B-206ENST00000564844 ZNF598Q86UK7 904 aaKnown RBP20.05■□□□□ 0.8
MAP1LC3B-206ENST00000564844 CLDN19Q8N6F1 224 aa20.05■□□□□ 0.8
MAP1LC3B-206ENST00000564844 RUBCNLQ9H714 662 aa20.05■□□□□ 0.8
MAP1LC3B-206ENST00000564844 GORASP2Q9H8Y8 452 aa20.05■□□□□ 0.8
MAP1LC3B-206ENST00000564844 DCAF13Q9NV06 445 aaKnown RBP20.05■□□□□ 0.8
MAP1LC3B-206ENST00000564844 PDHXO00330 501 aa20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 IDH3BO43837 385 aa20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 MGEA5O60502 916 aa20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 MSH3P20585 1137 aa20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 DUSP28Q4G0W2 176 aa20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 CPZQ66K79 652 aa20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 OVOS1Q6IE37 1185 aa20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 GDPD3Q7L5L3 318 aa20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 CCDC71Q8IV32 467 aaPredicted RBP20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 UBE2J2Q8N2K1 259 aa20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 TTC9BQ8N6N2 239 aa20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 NUSAP1Q9BXS6 441 aaKnown RBP20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 CSNK1G1Q9HCP0 422 aa20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 USE1Q9NZ43 259 aa20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 HTTP42858 3142 aa20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 ILVBLA1L0T0 632 aa20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 KRT87PA6NCN2 255 aa20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 AZGP1P25311 298 aaKnown RBP20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 CYP2C18P33260 490 aa20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 DAB2P98082 770 aa20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 ZXDBP98169 803 aa20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 PARP16Q8N5Y8 322 aa20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 DNASE1L2Q92874 299 aa20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 EGLN2Q96KS0 407 aa20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 FAM105AQ9NUU6 356 aa20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 ST3GAL5Q9UNP4 418 aa20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 SAMHD1Q9Y3Z3 626 aaKnown RBP20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 PCDHGA12O60330 932 aa20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 SERPINF2P08697 491 aa20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 MFSD10Q14728 455 aa20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 ZCCHC8Q6NZY4 707 aaKnown RBP20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 DOK6Q6PKX4 331 aa20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 TMEM86AQ8N2M4 240 aa20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 RNF175Q8N4F7 328 aa20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 SIRT5Q9NXA8 310 aa20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 USP34Q70CQ2 3546 aa20.04■□□□□ 0.8
MAP1LC3B-206ENST00000564844 SMIM35A0A1B0GVV1 85 aa20.03■□□□□ 0.8
MAP1LC3B-206ENST00000564844 NDST3O95803 873 aa20.03■□□□□ 0.8
MAP1LC3B-206ENST00000564844 COL6A1P12109 1028 aa20.03■□□□□ 0.8
MAP1LC3B-206ENST00000564844 IDH2P48735 452 aaKnown RBP20.03■□□□□ 0.8
MAP1LC3B-206ENST00000564844 CTSL3PQ5NE16 218 aa20.03■□□□□ 0.8
MAP1LC3B-206ENST00000564844 NXNL2Q5VZ03 156 aa20.03■□□□□ 0.8
MAP1LC3B-206ENST00000564844 METTL23Q86XA0 190 aa20.03■□□□□ 0.8
MAP1LC3B-206ENST00000564844 MMAAQ8IVH4 418 aaKnown RBP20.03■□□□□ 0.8
MAP1LC3B-206ENST00000564844 OR8H2Q8N162 312 aa20.03■□□□□ 0.8
MAP1LC3B-206ENST00000564844 CD200R1Q8TD46 325 aa20.03■□□□□ 0.8
MAP1LC3B-206ENST00000564844 PHF10Q8WUB8 498 aaKnown RBP20.03■□□□□ 0.8
MAP1LC3B-206ENST00000564844 REXO5Q96IC2 774 aaKnown RBP20.03■□□□□ 0.8
MAP1LC3B-206ENST00000564844 ZFYVE19Q96K21 471 aa20.03■□□□□ 0.8
MAP1LC3B-206ENST00000564844 EMILIN2Q9BXX0 1053 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms