RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 IHHQ14623 411 aa10.04□□□□□ -0.8
HDGFL3-204ENST00000563790 C1orf185Q5T7R7 199 aa10.04□□□□□ -0.8
HDGFL3-204ENST00000563790 H3F3CQ6NXT2 135 aa10.04□□□□□ -0.8
HDGFL3-204ENST00000563790 PAOXQ6QHF9 649 aa10.04□□□□□ -0.8
HDGFL3-204ENST00000563790 SHC4Q6S5L8 630 aa10.04□□□□□ -0.8
HDGFL3-204ENST00000563790 Q6ZPA2 131 aa10.04□□□□□ -0.8
HDGFL3-204ENST00000563790 TMEM110Q86TL2 294 aa10.04□□□□□ -0.8
HDGFL3-204ENST00000563790 TSPAN33Q86UF1 283 aa10.04□□□□□ -0.8
HDGFL3-204ENST00000563790 LINC00301Q8NCQ3 95 aa10.04□□□□□ -0.8
HDGFL3-204ENST00000563790 CREB3L4Q8TEY5 395 aa10.04□□□□□ -0.8
HDGFL3-204ENST00000563790 KIAA1191Q96A73 305 aa10.04□□□□□ -0.8
HDGFL3-204ENST00000563790 RIOK2Q9BVS4 552 aaKnown RBP10.04□□□□□ -0.8
HDGFL3-204ENST00000563790 ANGPTL4Q9BY76 406 aa10.04□□□□□ -0.8
HDGFL3-204ENST00000563790 KCTD10Q9H3F6 313 aa10.04□□□□□ -0.8
HDGFL3-204ENST00000563790 EML4Q9HC35 981 aaKnown RBP10.04□□□□□ -0.8
HDGFL3-204ENST00000563790 ASNSD1Q9NWL6 643 aa10.04□□□□□ -0.8
HDGFL3-204ENST00000563790 MED29Q9NX70 200 aa10.04□□□□□ -0.8
HDGFL3-204ENST00000563790 C3orf18Q9UK00 162 aa10.04□□□□□ -0.8
HDGFL3-204ENST00000563790 KCNS2Q9ULS6 477 aa10.04□□□□□ -0.8
HDGFL3-204ENST00000563790 SLC35F4A4IF30 521 aa10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 A8MUI8 341 aa10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 GPR89AB7ZAQ6 455 aa10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 CHUKO15111 745 aa10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 KMOO15229 486 aa10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 ADAM11O75078 769 aa10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 SLC25A12O75746 678 aa10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 CTSBP07858 339 aa10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 GPR89BP0CG08 455 aa10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 RHOQP17081 205 aa10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 TPH1P17752 444 aa10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 SYT1P21579 422 aa10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 ALAS2P22557 587 aa10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 PRDX3P30048 256 aaKnown RBP10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 TXLNAP40222 546 aa10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 ST13P50502 369 aaKnown RBP10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 EEF1A2Q05639 463 aaKnown RBP10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 PRKAA1Q13131 559 aa10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 TRIM14Q14142 442 aa10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 DEFB110Q30KQ9 67 aa10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 FCRLBQ6BAA4 426 aa10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 FIGLAQ6QHK4 219 aa10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 CRTC3Q6UUV7 619 aa10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 UNC13DQ70J99 1090 aa10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 PHLDB2Q86SQ0 1253 aa10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 AMER2Q8N7J2 671 aa10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 NAXEQ8NCW5 288 aa10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 OR52N2Q8NGI0 321 aa10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 GOLGA5Q8TBA6 731 aa10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 DLG3Q92796 817 aa10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 CHODLQ9H9P2 273 aa10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 TMEM8AQ9HCN3 771 aa10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 FAM60AQ9NP50 221 aa10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 TRIM10Q9UDY6 481 aa10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 ZNF629Q9UEG4 869 aaPredicted RBP10.03□□□□□ -0.8
HDGFL3-204ENST00000563790 RCCD1A6NED2 376 aa10.02□□□□□ -0.81
HDGFL3-204ENST00000563790 KLRC4O43908 158 aa10.02□□□□□ -0.81
HDGFL3-204ENST00000563790 MAN1A2O60476 641 aa10.02□□□□□ -0.81
HDGFL3-204ENST00000563790 IGHV4-31P0DP07 118 aa10.02□□□□□ -0.81
HDGFL3-204ENST00000563790 BRD2P25440 801 aaKnown RBP10.02□□□□□ -0.81
HDGFL3-204ENST00000563790 RFC3P40938 356 aa10.02□□□□□ -0.81
HDGFL3-204ENST00000563790 MCCD1P59942 119 aaPredicted RBP10.02□□□□□ -0.81
HDGFL3-204ENST00000563790 YWHAEP62258 255 aaKnown RBP10.02□□□□□ -0.81
HDGFL3-204ENST00000563790 LOXL1Q08397 574 aaPredicted RBP10.02□□□□□ -0.81
HDGFL3-204ENST00000563790 FOXO1Q12778 655 aa10.02□□□□□ -0.81
HDGFL3-204ENST00000563790 CUL2Q13617 745 aa10.02□□□□□ -0.81
HDGFL3-204ENST00000563790 RPE65Q16518 533 aa10.02□□□□□ -0.81
HDGFL3-204ENST00000563790 KNOP1Q1ED39 458 aaKnown RBP10.02□□□□□ -0.81
HDGFL3-204ENST00000563790 SLC20A1Q8WUM9 679 aa10.02□□□□□ -0.81
HDGFL3-204ENST00000563790 IMMP1LQ96LU5 166 aa10.02□□□□□ -0.81
HDGFL3-204ENST00000563790 MCCC1Q96RQ3 725 aaPredicted RBP10.02□□□□□ -0.81
HDGFL3-204ENST00000563790 ZCCHC2Q9C0B9 1178 aaKnown RBP10.02□□□□□ -0.81
HDGFL3-204ENST00000563790 FAM207AQ9NSI2 230 aaPredicted RBP10.02□□□□□ -0.81
HDGFL3-204ENST00000563790 A0A1W2PQ67 120 aa10.01□□□□□ -0.81
HDGFL3-204ENST00000563790 C2orf81A6NN90 581 aa10.01□□□□□ -0.81
HDGFL3-204ENST00000563790 KLRC4-KLRK1H3BQV0 150 aa10.01□□□□□ -0.81
HDGFL3-204ENST00000563790 MATN3O15232 486 aa10.01□□□□□ -0.81
HDGFL3-204ENST00000563790 KIAA0513O60268 411 aa10.01□□□□□ -0.81
HDGFL3-204ENST00000563790 GRAP2O75791 330 aa10.01□□□□□ -0.81
HDGFL3-204ENST00000563790 TFE3P19532 575 aaPredicted RBP10.01□□□□□ -0.81
HDGFL3-204ENST00000563790 CXCR2P25025 360 aa10.01□□□□□ -0.81
HDGFL3-204ENST00000563790 OC90Q02509 493 aaPredicted RBP10.01□□□□□ -0.81
HDGFL3-204ENST00000563790 MEP1AQ16819 746 aa10.01□□□□□ -0.81
HDGFL3-204ENST00000563790 MANEALQ5VSG8 457 aa10.01□□□□□ -0.81
HDGFL3-204ENST00000563790 KDELC1Q6UW63 502 aa10.01□□□□□ -0.81
HDGFL3-204ENST00000563790 TTLL10Q6ZVT0 673 aa10.01□□□□□ -0.81
HDGFL3-204ENST00000563790 MAATS1Q7Z4T9 603 aa10.01□□□□□ -0.81
HDGFL3-204ENST00000563790 STT3BQ8TCJ2 826 aa10.01□□□□□ -0.81
HDGFL3-204ENST00000563790 SCRN2Q96FV2 425 aa10.01□□□□□ -0.81
HDGFL3-204ENST00000563790 NPY6RQ99463 290 aa10.01□□□□□ -0.81
HDGFL3-204ENST00000563790 NPAS2Q99743 824 aa10.01□□□□□ -0.81
HDGFL3-204ENST00000563790 CHRNA10Q9GZZ6 450 aa10.01□□□□□ -0.81
HDGFL3-204ENST00000563790 ZNF700Q9H0M5 742 aa10.01□□□□□ -0.81
HDGFL3-204ENST00000563790 OR2AG1Q9H205 316 aa10.01□□□□□ -0.81
HDGFL3-204ENST00000563790 SLC39A2Q9NP94 309 aa10.01□□□□□ -0.81
HDGFL3-204ENST00000563790 UBA2Q9UBT2 640 aaPredicted RBP10.01□□□□□ -0.81
HDGFL3-204ENST00000563790 SLC24A2Q9UI40 661 aa10.01□□□□□ -0.81
HDGFL3-204ENST00000563790 TESMINQ9Y4I5 508 aa10.01□□□□□ -0.81
HDGFL3-204ENST00000563790 DNAH3Q8TD57 4116 aa10.01□□□□□ -0.81
HDGFL3-204ENST00000563790 GABRR3A8MPY1 467 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms