RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 DPY19L1Q2PZI1 675 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 STEAP3Q658P3 488 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 MTSS1LQ765P7 747 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 FAM46DQ8NEK8 389 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 ADAM32Q8TC27 787 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 TWIST2Q8WVJ9 160 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 ALG9Q9H6U8 611 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 NUFIP1Q9UHK0 495 aaKnown RBP6.15□□□□□ -1.43
CLK3-212ENST00000563418 PRSS51A0A1B0GVH4 220 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 TCRBV7S2A1N4TA0A589 114 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 PMM2O15305 246 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 ZNF254O75437 659 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 IL1R1P14778 569 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 ATXN1P54253 815 aaKnown RBP6.15□□□□□ -1.43
CLK3-212ENST00000563418 ATF7IP2Q5U623 682 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 METTL11BQ5VVY1 283 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 PTRHD1Q6GMV3 140 aaKnown RBP6.15□□□□□ -1.43
CLK3-212ENST00000563418 BEND5Q7L4P6 421 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 TSPYL5Q86VY4 417 aaPredicted RBP6.15□□□□□ -1.43
CLK3-212ENST00000563418 TCTE3Q8IZS6 198 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 NAT8LQ8N9F0 302 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 EXO5Q9H790 373 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 DTLQ9NZJ0 730 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 A0A1W2PP18 115 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 SHOXO15266 292 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 KIAA0513O60268 411 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 MT-ND1P03886 318 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 HMGCRP04035 888 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 C2P06681 752 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 CD48P09326 243 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 H2AFB2P0C5Z0 115 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 RRAS2P62070 204 aaPredicted RBP6.15□□□□□ -1.43
CLK3-212ENST00000563418 TSTQ16762 297 aaKnown RBP6.15□□□□□ -1.43
CLK3-212ENST00000563418 PRAMEF13Q5VWM6 474 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 NCEH1Q6PIU2 408 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 SV2AQ7L0J3 742 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 FTMTQ8N4E7 242 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 OR1J4Q8NGS1 313 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 SLC7A6Q92536 515 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 C8orf37Q96NL8 207 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 LGMNQ99538 433 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 CSF2P04141 144 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 PRKCHP24723 683 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 RAPSNQ13702 412 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 RHBDF2Q6PJF5 856 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 BLOC1S3Q6QNY0 202 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 PGBD3Q8N328 593 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 ANKK1Q8NFD2 765 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 OR10Z1Q8NGY1 313 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 SGCDQ92629 289 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 RNF157Q96PX1 679 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 ASPNQ9BXN1 380 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.15□□□□□ -1.43
CLK3-212ENST00000563418 ERVK13-1Q9NX77 482 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 TFCP2L1Q9NZI6 479 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 PCDHGB1Q9Y5G3 927 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 DCLK1O15075 740 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 ZNF432O94892 652 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 CYBBP04839 570 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 ARF4P18085 180 aaPredicted RBP6.14□□□□□ -1.43
CLK3-212ENST00000563418 CD53P19397 219 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 RAB8AP61006 207 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 EN1Q05925 392 aaPredicted RBP6.14□□□□□ -1.43
CLK3-212ENST00000563418 LINC00471Q8N535 108 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 NIPA2Q8N8Q9 360 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 CHDHQ8NE62 594 aaPredicted RBP6.14□□□□□ -1.43
CLK3-212ENST00000563418 PBDC1Q9BVG4 233 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 FAM124BQ9H5Z6 455 aaPredicted RBP6.14□□□□□ -1.43
CLK3-212ENST00000563418 ENAMQ9NRM1 1142 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 NFASCO94856 1347 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 A0A0G2JLW4 131 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 CPNE6O95741 557 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 TSPAN8P19075 237 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 RAB13P51153 203 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 MXD1Q05195 221 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 PEA15Q15121 130 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 SGO1Q5FBB7 561 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 USP45Q70EL2 814 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 FAM122BQ7Z309 247 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 MARVELD3Q96A59 401 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 C18orf25Q96B23 403 aaPredicted RBP6.14□□□□□ -1.43
CLK3-212ENST00000563418 GSX2Q9BZM3 304 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 OLAHQ9NV23 265 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 IL37Q9NZH6 218 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 PCDHB3Q9Y5E6 796 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 ACTL7AQ9Y615 435 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 ALKQ9UM73 1620 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 GRXCR2A6NFK2 248 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 F8VP50 259 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 OR10H3O60404 316 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 SREBF1P36956 1147 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 LAPTM5Q13571 262 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 PCLAFQ15004 111 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 FCRLBQ6BAA4 426 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 SLC25A24Q6NUK1 477 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 C1orf94Q6P1W5 598 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 TTLL6Q8N841 843 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 OR2T35Q8NGX2 323 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 TMEM80Q96HE8 168 aa6.14□□□□□ -1.43
CLK3-212ENST00000563418 MYRFLQ96LU7 910 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms