RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 LMNTD1Q8N9Z9 388 aa16.19■□□□□ 0.18
HDGFL3-203ENST00000563404 OR2Y1Q8NGV0 311 aa16.19■□□□□ 0.18
HDGFL3-203ENST00000563404 OR5K2Q8NHB8 316 aa16.19■□□□□ 0.18
HDGFL3-203ENST00000563404 ELMO1Q92556 727 aa16.19■□□□□ 0.18
HDGFL3-203ENST00000563404 N4BP2L2Q92802 583 aaPredicted RBP16.19■□□□□ 0.18
HDGFL3-203ENST00000563404 SLC29A3Q9BZD2 475 aa16.19■□□□□ 0.18
HDGFL3-203ENST00000563404 LACRTQ9GZZ8 138 aa16.19■□□□□ 0.18
HDGFL3-203ENST00000563404 LRRC40Q9H9A6 602 aa16.19■□□□□ 0.18
HDGFL3-203ENST00000563404 GRPEL1Q9HAV7 217 aa16.19■□□□□ 0.18
HDGFL3-203ENST00000563404 P4HTMQ9NXG6 502 aa16.19■□□□□ 0.18
HDGFL3-203ENST00000563404 IFT80Q9P2H3 777 aaPredicted RBP16.19■□□□□ 0.18
HDGFL3-203ENST00000563404 R3HDM2Q9Y2K5 976 aaKnown RBP16.19■□□□□ 0.18
HDGFL3-203ENST00000563404 TDRKHQ9Y2W6 561 aaKnown RBP16.19■□□□□ 0.18
HDGFL3-203ENST00000563404 CENPEQ02224 2701 aa16.18■□□□□ 0.18
HDGFL3-203ENST00000563404 SNRNP200O75643 2136 aaKnown RBP16.18■□□□□ 0.18
HDGFL3-203ENST00000563404 CELSR2Q9HCU4 2923 aa16.18■□□□□ 0.18
HDGFL3-203ENST00000563404 CCDC162PA2VCL2 907 aa16.18■□□□□ 0.18
HDGFL3-203ENST00000563404 GRID2IPA4D2P6 1211 aa16.18■□□□□ 0.18
HDGFL3-203ENST00000563404 OR1I1O60431 355 aa16.18■□□□□ 0.18
HDGFL3-203ENST00000563404 DDAH2O95865 285 aa16.18■□□□□ 0.18
HDGFL3-203ENST00000563404 ITGAXP20702 1163 aa16.18■□□□□ 0.18
HDGFL3-203ENST00000563404 MSNP26038 577 aaKnown RBP16.18■□□□□ 0.18
HDGFL3-203ENST00000563404 CYLC1P35663 651 aaPredicted RBP16.18■□□□□ 0.18
HDGFL3-203ENST00000563404 FOLR3P41439 243 aa16.18■□□□□ 0.18
HDGFL3-203ENST00000563404 ITIH4Q14624 930 aa16.18■□□□□ 0.18
HDGFL3-203ENST00000563404 MYBPC3Q14896 1274 aa16.18■□□□□ 0.18
HDGFL3-203ENST00000563404 CCDC38Q502W7 563 aa16.18■□□□□ 0.18
HDGFL3-203ENST00000563404 IGFL3Q6UXB1 125 aa16.18■□□□□ 0.18
HDGFL3-203ENST00000563404 PACS1Q6VY07 963 aa16.18■□□□□ 0.18
HDGFL3-203ENST00000563404 IQCKQ8N0W5 287 aa16.18■□□□□ 0.18
HDGFL3-203ENST00000563404 TAB3Q8N5C8 712 aaPredicted RBP16.18■□□□□ 0.18
HDGFL3-203ENST00000563404 PROKR1Q8TCW9 393 aa16.18■□□□□ 0.18
HDGFL3-203ENST00000563404 FER1L6-AS2Q96M78 137 aa16.18■□□□□ 0.18
HDGFL3-203ENST00000563404 IP6K3Q96PC2 410 aa16.18■□□□□ 0.18
HDGFL3-203ENST00000563404 OR6C2Q9NZP2 312 aa16.18■□□□□ 0.18
HDGFL3-203ENST00000563404 POLG2Q9UHN1 485 aa16.18■□□□□ 0.18
HDGFL3-203ENST00000563404 GPN3Q9UHW5 284 aaPredicted RBP16.18■□□□□ 0.18
HDGFL3-203ENST00000563404 B3GNT3Q9Y2A9 372 aa16.18■□□□□ 0.18
HDGFL3-203ENST00000563404 KLHL20Q9Y2M5 609 aa16.18■□□□□ 0.18
HDGFL3-203ENST00000563404 EPN1Q9Y6I3 576 aaPredicted RBP16.18■□□□□ 0.18
HDGFL3-203ENST00000563404 CRYBG3Q68DQ2 2970 aa16.17■□□□□ 0.18
HDGFL3-203ENST00000563404 AP2A1O95782 977 aa16.17■□□□□ 0.18
HDGFL3-203ENST00000563404 LDLRP01130 860 aa16.17■□□□□ 0.18
HDGFL3-203ENST00000563404 FTH1P02794 183 aa16.17■□□□□ 0.18
HDGFL3-203ENST00000563404 VARSP26640 1264 aaKnown RBP16.17■□□□□ 0.18
HDGFL3-203ENST00000563404 CDC25BP30305 580 aa16.17■□□□□ 0.18
HDGFL3-203ENST00000563404 SOX8P57073 446 aa16.17■□□□□ 0.18
HDGFL3-203ENST00000563404 SLC5A12Q1EHB4 618 aa16.17■□□□□ 0.18
HDGFL3-203ENST00000563404 NKAIN1Q4KMZ8 207 aa16.17■□□□□ 0.18
HDGFL3-203ENST00000563404 ZNF787Q6DD87 383 aa16.17■□□□□ 0.18
HDGFL3-203ENST00000563404 TMTC1Q8IUR5 882 aa16.17■□□□□ 0.18
HDGFL3-203ENST00000563404 CLEC1AQ8NC01 280 aa16.17■□□□□ 0.18
HDGFL3-203ENST00000563404 OR13J1Q8NGT2 312 aa16.17■□□□□ 0.18
HDGFL3-203ENST00000563404 C17orf62Q9BQA9 187 aa16.17■□□□□ 0.18
HDGFL3-203ENST00000563404 MENTQ9BUN1 341 aa16.17■□□□□ 0.18
HDGFL3-203ENST00000563404 AP1M1Q9BXS5 423 aa16.17■□□□□ 0.18
HDGFL3-203ENST00000563404 IMPACTQ9P2X3 320 aa16.17■□□□□ 0.18
HDGFL3-203ENST00000563404 NDOR1Q9UHB4 597 aa16.17■□□□□ 0.18
HDGFL3-203ENST00000563404 NTNG1Q9Y2I2 539 aa16.17■□□□□ 0.18
HDGFL3-203ENST00000563404 MYO9AB2RTY4 2548 aa16.16■□□□□ 0.18
HDGFL3-203ENST00000563404 TCRBV7S2A1N4TA0A589 114 aa16.16■□□□□ 0.18
HDGFL3-203ENST00000563404 BTNL10A8MVZ5 291 aa16.16■□□□□ 0.18
HDGFL3-203ENST00000563404 ISM1B1AKI9 464 aa16.16■□□□□ 0.18
HDGFL3-203ENST00000563404 PEX12O00623 359 aa16.16■□□□□ 0.18
HDGFL3-203ENST00000563404 PKLRP30613 574 aa16.16■□□□□ 0.18
HDGFL3-203ENST00000563404 CSE1LP55060 971 aaKnown RBP16.16■□□□□ 0.18
HDGFL3-203ENST00000563404 NAP1L1P55209 391 aaKnown RBP16.16■□□□□ 0.18
HDGFL3-203ENST00000563404 KLF1Q13351 362 aaPredicted RBP16.16■□□□□ 0.18
HDGFL3-203ENST00000563404 TLDC1Q6P9B6 456 aa16.16■□□□□ 0.18
HDGFL3-203ENST00000563404 RAD9BQ6WBX8 426 aa16.16■□□□□ 0.18
HDGFL3-203ENST00000563404 Q6ZS92 163 aa16.16■□□□□ 0.18
HDGFL3-203ENST00000563404 CUZD1Q86UP6 607 aa16.16■□□□□ 0.18
HDGFL3-203ENST00000563404 VRK3Q8IV63 474 aa16.16■□□□□ 0.18
HDGFL3-203ENST00000563404 LINC01555Q8NAE3 123 aa16.16■□□□□ 0.18
HDGFL3-203ENST00000563404 OR52K1Q8NGK4 314 aa16.16■□□□□ 0.18
HDGFL3-203ENST00000563404 PTERQ96BW5 349 aa16.16■□□□□ 0.18
HDGFL3-203ENST00000563404 LRRC45Q96CN5 670 aa16.16■□□□□ 0.18
HDGFL3-203ENST00000563404 BARD1Q99728 777 aaKnown RBP16.16■□□□□ 0.18
HDGFL3-203ENST00000563404 TMEM121Q9BTD3 319 aa16.16■□□□□ 0.18
HDGFL3-203ENST00000563404 LUC7LQ9NQ29 371 aaKnown RBP16.16■□□□□ 0.18
HDGFL3-203ENST00000563404 TXLNGQ9NUQ3 528 aa16.16■□□□□ 0.18
HDGFL3-203ENST00000563404 EURLQ9NYK6 297 aa16.16■□□□□ 0.18
HDGFL3-203ENST00000563404 SLC2A6Q9UGQ3 507 aa16.16■□□□□ 0.18
HDGFL3-203ENST00000563404 PACSIN2Q9UNF0 486 aaPredicted RBP16.16■□□□□ 0.18
HDGFL3-203ENST00000563404 SRPK3Q9UPE1 567 aa16.16■□□□□ 0.18
HDGFL3-203ENST00000563404 PLCL2Q9UPR0 1127 aa16.16■□□□□ 0.18
HDGFL3-203ENST00000563404 CSAG2Q9Y5P2 127 aa16.16■□□□□ 0.18
HDGFL3-203ENST00000563404 QSOX1O00391 747 aa16.15■□□□□ 0.18
HDGFL3-203ENST00000563404 ALOX12BO75342 701 aa16.15■□□□□ 0.18
HDGFL3-203ENST00000563404 MAGP20916 626 aa16.15■□□□□ 0.18
HDGFL3-203ENST00000563404 CCR7P32248 378 aa16.15■□□□□ 0.18
HDGFL3-203ENST00000563404 GRB7Q14451 532 aa16.15■□□□□ 0.18
HDGFL3-203ENST00000563404 KIR2DS3Q14952 304 aa16.15■□□□□ 0.18
HDGFL3-203ENST00000563404 SYTL3Q4VX76 610 aa16.15■□□□□ 0.18
HDGFL3-203ENST00000563404 LYPLAL1Q5VWZ2 237 aa16.15■□□□□ 0.18
HDGFL3-203ENST00000563404 MAMDC2Q7Z304 686 aaPredicted RBP16.15■□□□□ 0.18
HDGFL3-203ENST00000563404 C2orf73Q8N5S3 287 aaPredicted RBP16.15■□□□□ 0.18
HDGFL3-203ENST00000563404 ACRBPQ8NEB7 543 aa16.15■□□□□ 0.18
HDGFL3-203ENST00000563404 SLC35B2Q8TB61 432 aa16.15■□□□□ 0.18
HDGFL3-203ENST00000563404 LKAAEAR1Q8TD35 194 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms