RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 ADGRE3Q9BY15 652 aa13.02□□□□□ -0.33
SPG7-207ENST00000563218 ACSS3Q9H6R3 686 aa13.02□□□□□ -0.33
SPG7-207ENST00000563218 SOX13Q9UN79 622 aa13.02□□□□□ -0.33
SPG7-207ENST00000563218 PSMD13Q9UNM6 376 aa13.02□□□□□ -0.33
SPG7-207ENST00000563218 PCDHGA6Q9Y5G7 932 aa13.02□□□□□ -0.33
SPG7-207ENST00000563218 CRYBG3Q68DQ2 2970 aa13.02□□□□□ -0.33
SPG7-207ENST00000563218 PCM1Q15154 2024 aa13.01□□□□□ -0.33
SPG7-207ENST00000563218 MDC1Q14676 2089 aaKnown RBP13.01□□□□□ -0.33
SPG7-207ENST00000563218 FAM237BA0A1B0GVD1 139 aa13.01□□□□□ -0.33
SPG7-207ENST00000563218 TCRBV9S1A1TA0A576 114 aa13.01□□□□□ -0.33
SPG7-207ENST00000563218 GPR89AB7ZAQ6 455 aa13.01□□□□□ -0.33
SPG7-207ENST00000563218 POC1B-GALNT4F8VUJ3 575 aa13.01□□□□□ -0.33
SPG7-207ENST00000563218 H3BQF6 201 aa13.01□□□□□ -0.33
SPG7-207ENST00000563218 TOX3O15405 576 aaPredicted RBP13.01□□□□□ -0.33
SPG7-207ENST00000563218 RGS16O15492 202 aaPredicted RBP13.01□□□□□ -0.33
SPG7-207ENST00000563218 CDK14O94921 469 aa13.01□□□□□ -0.33
SPG7-207ENST00000563218 GPR89BP0CG08 455 aa13.01□□□□□ -0.33
SPG7-207ENST00000563218 SLCO1A2P46721 670 aa13.01□□□□□ -0.33
SPG7-207ENST00000563218 TUBB3Q13509 450 aa13.01□□□□□ -0.33
SPG7-207ENST00000563218 POU6F1Q14863 301 aa13.01□□□□□ -0.33
SPG7-207ENST00000563218 CRYMQ14894 314 aa13.01□□□□□ -0.33
SPG7-207ENST00000563218 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.01□□□□□ -0.33
SPG7-207ENST00000563218 PRR30Q53SZ7 412 aaPredicted RBP13.01□□□□□ -0.33
SPG7-207ENST00000563218 AGBL2Q5U5Z8 902 aa13.01□□□□□ -0.33
SPG7-207ENST00000563218 AGAP9Q5VTM2 703 aa13.01□□□□□ -0.33
SPG7-207ENST00000563218 FAM69BQ5VUD6 431 aa13.01□□□□□ -0.33
SPG7-207ENST00000563218 CAPRIN2Q6IMN6 1127 aaKnown RBP13.01□□□□□ -0.33
SPG7-207ENST00000563218 RIBC1Q8N443 379 aaPredicted RBP13.01□□□□□ -0.33
SPG7-207ENST00000563218 ZNF669Q96BR6 464 aaPredicted RBP13.01□□□□□ -0.33
SPG7-207ENST00000563218 MAP3K3Q99759 626 aa13.01□□□□□ -0.33
SPG7-207ENST00000563218 STMN4Q9H169 189 aaPredicted RBP13.01□□□□□ -0.33
SPG7-207ENST00000563218 MRM3Q9HC36 420 aaKnown RBP13.01□□□□□ -0.33
SPG7-207ENST00000563218 MAGEE1Q9HCI5 957 aa13.01□□□□□ -0.33
SPG7-207ENST00000563218 FETUBQ9UGM5 382 aa13.01□□□□□ -0.33
SPG7-207ENST00000563218 SLC24A2Q9UI40 661 aa13.01□□□□□ -0.33
SPG7-207ENST00000563218 KCND3Q9UK17 655 aa13.01□□□□□ -0.33
SPG7-207ENST00000563218 PADI1Q9ULC6 663 aa13.01□□□□□ -0.33
SPG7-207ENST00000563218 CFAP20Q9Y6A4 193 aaKnown RBP13.01□□□□□ -0.33
SPG7-207ENST00000563218 RP1L1Q8IWN7 2480 aaPredicted RBP13□□□□□ -0.33
SPG7-207ENST00000563218 ANKRD12Q6UB98 2062 aa13□□□□□ -0.33
SPG7-207ENST00000563218 HEATR9A2RTY3 570 aa13□□□□□ -0.33
SPG7-207ENST00000563218 ENO4A6NNW6 628 aa13□□□□□ -0.33
SPG7-207ENST00000563218 VEGFDO43915 354 aa13□□□□□ -0.33
SPG7-207ENST00000563218 CDH16O75309 829 aa13□□□□□ -0.33
SPG7-207ENST00000563218 USP1O94782 785 aa13□□□□□ -0.33
SPG7-207ENST00000563218 IDSP22304 550 aa13□□□□□ -0.33
SPG7-207ENST00000563218 ADRA1DP25100 572 aa13□□□□□ -0.33
SPG7-207ENST00000563218 PBLDP30039 288 aaPredicted RBP13□□□□□ -0.33
SPG7-207ENST00000563218 MSH2P43246 934 aa13□□□□□ -0.33
SPG7-207ENST00000563218 TMEM115Q12893 351 aaPredicted RBP13□□□□□ -0.33
SPG7-207ENST00000563218 NFE2L1Q14494 772 aa13□□□□□ -0.33
SPG7-207ENST00000563218 GPR19Q15760 415 aa13□□□□□ -0.33
SPG7-207ENST00000563218 RPE65Q16518 533 aa13□□□□□ -0.33
SPG7-207ENST00000563218 ANKRD20A4Q4UJ75 823 aa13□□□□□ -0.33
SPG7-207ENST00000563218 PRAMEF17Q5VTA0 474 aa13□□□□□ -0.33
SPG7-207ENST00000563218 PDPK2PQ6A1A2 396 aa13□□□□□ -0.33
SPG7-207ENST00000563218 LCN10Q6JVE6 187 aa13□□□□□ -0.33
SPG7-207ENST00000563218 WASH2PQ6VEQ5 465 aa13□□□□□ -0.33
SPG7-207ENST00000563218 CYS1Q717R9 158 aa13□□□□□ -0.33
SPG7-207ENST00000563218 ATCAYQ86WG3 371 aa13□□□□□ -0.33
SPG7-207ENST00000563218 TDRPQ86YL5 185 aa13□□□□□ -0.33
SPG7-207ENST00000563218 TTC30BQ8N4P2 665 aa13□□□□□ -0.33
SPG7-207ENST00000563218 SIDT2Q8NBJ9 832 aaKnown RBP13□□□□□ -0.33
SPG7-207ENST00000563218 SERBP1Q8NC51 408 aaKnown RBP eCLIP13□□□□□ -0.33
SPG7-207ENST00000563218 CDKL2Q92772 493 aa13□□□□□ -0.33
SPG7-207ENST00000563218 ARL8AQ96BM9 186 aa13□□□□□ -0.33
SPG7-207ENST00000563218 ZDHHC12Q96GR4 267 aa13□□□□□ -0.33
SPG7-207ENST00000563218 SLC41A2Q96JW4 573 aa13□□□□□ -0.33
SPG7-207ENST00000563218 ATP6V1G3Q96LB4 118 aa13□□□□□ -0.33
SPG7-207ENST00000563218 PPM1MQ96MI6 270 aa13□□□□□ -0.33
SPG7-207ENST00000563218 VPS35Q96QK1 796 aa13□□□□□ -0.33
SPG7-207ENST00000563218 RANBP9Q96S59 729 aa13□□□□□ -0.33
SPG7-207ENST00000563218 TRIM56Q9BRZ2 755 aaKnown RBP13□□□□□ -0.33
SPG7-207ENST00000563218 KIFC1Q9BW19 673 aa13□□□□□ -0.33
SPG7-207ENST00000563218 PLAC1Q9HBJ0 212 aa13□□□□□ -0.33
SPG7-207ENST00000563218 WASH6PQ9NQA3 447 aa13□□□□□ -0.33
SPG7-207ENST00000563218 SEMA5BQ9P283 1151 aa13□□□□□ -0.33
SPG7-207ENST00000563218 EPHA6Q9UF33 1036 aa13□□□□□ -0.33
SPG7-207ENST00000563218 TCAF1Q9Y4C2 921 aa13□□□□□ -0.33
SPG7-207ENST00000563218 IKBKGQ9Y6K9 419 aa13□□□□□ -0.33
SPG7-207ENST00000563218 SEC16AO15027 2179 aa13□□□□□ -0.33
SPG7-207ENST00000563218 DOCK10Q96BY6 2186 aa12.99□□□□□ -0.33
SPG7-207ENST00000563218 ARGFXA6NJG6 315 aa12.99□□□□□ -0.33
SPG7-207ENST00000563218 HMGB1P1B2RPK0 211 aaPredicted RBP12.99□□□□□ -0.33
SPG7-207ENST00000563218 GAPDHSO14556 408 aaPredicted RBP12.99□□□□□ -0.33
SPG7-207ENST00000563218 BUD23O43709 281 aaKnown RBP12.99□□□□□ -0.33
SPG7-207ENST00000563218 UGT1A9O60656 530 aa12.99□□□□□ -0.33
SPG7-207ENST00000563218 CCNYL3P0C7X3 344 aa12.99□□□□□ -0.33
SPG7-207ENST00000563218 PAMP19021 973 aa12.99□□□□□ -0.33
SPG7-207ENST00000563218 UGT1A6P19224 532 aa12.99□□□□□ -0.33
SPG7-207ENST00000563218 UGT1A1P22309 533 aa12.99□□□□□ -0.33
SPG7-207ENST00000563218 UGT1A4P22310 534 aa12.99□□□□□ -0.33
SPG7-207ENST00000563218 ATP5DP30049 168 aa12.99□□□□□ -0.33
SPG7-207ENST00000563218 ARCN1P48444 511 aaKnown RBP12.99□□□□□ -0.33
SPG7-207ENST00000563218 FRG1Q14331 258 aaKnown RBP12.99□□□□□ -0.33
SPG7-207ENST00000563218 EFTUD2Q15029 972 aaKnown RBP eCLIP12.99□□□□□ -0.332e-7■■■□□ 14.7
SPG7-207ENST00000563218 KBTBD12Q3ZCT8 623 aa12.99□□□□□ -0.33
SPG7-207ENST00000563218 TTMPQ5BVD1 217 aa12.99□□□□□ -0.33
SPG7-207ENST00000563218 ZNF449Q6P9G9 518 aa12.99□□□□□ -0.33
SPG7-207ENST00000563218 CES3Q6UWW8 571 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms