RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 PKP4Q99569 1192 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 CCT7Q99832 543 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 GSDMCQ9BYG8 508 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 MIR1-1HGQ9H1L0 117 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 NOL11Q9H8H0 719 aaKnown RBP10.03□□□□□ -0.8
USP3-219ENST00000561326 KCNK13Q9HB14 408 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 PRMT8Q9NR22 394 aaPredicted RBP10.03□□□□□ -0.8
USP3-219ENST00000561326 DNAJC11Q9NVH1 559 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 DNAJC28Q9NX36 388 aa10.03□□□□□ -0.8
USP3-219ENST00000561326 STOX2Q9P2F5 926 aaPredicted RBP10.03□□□□□ -0.8
USP3-219ENST00000561326 PCYT1BQ9Y5K3 369 aaPredicted RBP10.03□□□□□ -0.8
USP3-219ENST00000561326 OR5K4A6NMS3 321 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 PRR5-ARHGAP8B1AHC4 643 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 MYO1CO00159 1063 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 TLR4O00206 839 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 HGSO14964 777 aaPredicted RBP10.02□□□□□ -0.81
USP3-219ENST00000561326 CLGNO14967 610 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 CCDC22O60826 627 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 DIAPH2O60879 1101 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 SLC16A8O95907 504 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 ENO1P06733 434 aaKnown RBP10.02□□□□□ -0.81
USP3-219ENST00000561326 EBLN1P0CF75 366 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 UROSP10746 265 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 GNSP15586 552 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 TSPAN8P19075 237 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 GDF5P43026 501 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 CCR10P46092 362 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 BDKRB1P46663 353 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 SLC6A12P48065 614 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 FNTBP49356 437 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 C21orf59P57076 290 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 CSTF1Q05048 431 aaKnown RBP10.02□□□□□ -0.81
USP3-219ENST00000561326 CDC16Q13042 620 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 NAE1Q13564 534 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 FZD2Q14332 565 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 C18orf21Q32NC0 220 aaPredicted RBP10.02□□□□□ -0.81
USP3-219ENST00000561326 FBXO48Q5FWF7 155 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 METTL21CQ5VZV1 264 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 CAPN13Q6MZZ7 669 aaPredicted RBP10.02□□□□□ -0.81
USP3-219ENST00000561326 EPGNQ6UW88 154 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 ABRAXAS1Q6UWZ7 409 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 MBOAT1Q6ZNC8 495 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 RPS27LQ71UM5 84 aaKnown RBP10.02□□□□□ -0.81
USP3-219ENST00000561326 PARGQ86W56 976 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 KLHDC8AQ8IYD2 350 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 SDR16C5Q8N3Y7 309 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 GBP7Q8N8V2 638 aaPredicted RBP10.02□□□□□ -0.81
USP3-219ENST00000561326 SPDYE1Q8NFV5 336 aaPredicted RBP10.02□□□□□ -0.81
USP3-219ENST00000561326 AGAP11Q8TF27 550 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 STON2Q8WXE9 905 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 PDXPQ96GD0 296 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 RMDN2Q96LZ7 410 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 SLC6A18Q96N87 628 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 ORAI3Q9BRQ5 295 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 TMEM79Q9BSE2 394 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 NTMT1Q9BV86 223 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 RAB11FIP5Q9BXF6 653 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 NUSAP1Q9BXS6 441 aaKnown RBP10.02□□□□□ -0.81
USP3-219ENST00000561326 TMEM168Q9H0V1 697 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 ATG10Q9H0Y0 220 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 TM9SF3Q9HD45 589 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 GPR27Q9NS67 375 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 MRGBPQ9NV56 204 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 HEY2Q9UBP5 337 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 FBXO4Q9UKT5 387 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 PCOLCE2Q9UKZ9 415 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 TRIM33Q9UPN9 1127 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 TDRKHQ9Y2W6 561 aaKnown RBP10.02□□□□□ -0.81
USP3-219ENST00000561326 PLEKHM1Q9Y4G2 1056 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 KCNE2Q9Y6J6 123 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 ZDBF2Q9HCK1 2354 aa10.02□□□□□ -0.81
USP3-219ENST00000561326 PRR19A6NJB7 356 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 CCT8L1PA6NM43 557 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 UBFD1O14562 309 aaKnown RBP10.01□□□□□ -0.81
USP3-219ENST00000561326 OR7A17O14581 309 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 VILLO15195 856 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 BCAT2O15382 392 aaPredicted RBP10.01□□□□□ -0.81
USP3-219ENST00000561326 VPS4BO75351 444 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 CLDN9O95484 217 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 HGFP14210 728 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 JUNDP17535 347 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 BCKDHBP21953 392 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 MAOBP27338 520 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 HMOX2P30519 316 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 CNR2P34972 360 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 ACTR1BP42025 376 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 IDH3AP50213 366 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 AFF3P51826 1226 aaKnown RBP10.01□□□□□ -0.81
USP3-219ENST00000561326 PNLIPRP1P54315 467 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 ACTR1AP61163 376 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 IFT88Q13099 833 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 EIF2B5Q13144 721 aaKnown RBP10.01□□□□□ -0.81
USP3-219ENST00000561326 PRKG2Q13237 762 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.01□□□□□ -0.81
USP3-219ENST00000561326 TPRG1LQ5T0D9 272 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 SLC30A9Q6PML9 568 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 TSSK4Q6SA08 328 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 XKR5Q6UX68 686 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 ATG14Q6ZNE5 492 aa10.01□□□□□ -0.81
USP3-219ENST00000561326 TRPM8Q7Z2W7 1104 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms