RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 CCDC88CQ9P219 2028 aa17.82■□□□□ 0.44
TPM1-226ENST00000560959 A0A1B0GX78 115 aa17.82■□□□□ 0.44
TPM1-226ENST00000560959 ANXA9O76027 345 aa17.82■□□□□ 0.44
TPM1-226ENST00000560959 CRTAMO95727 393 aa17.82■□□□□ 0.44
TPM1-226ENST00000560959 AGTP01019 485 aa17.82■□□□□ 0.44
TPM1-226ENST00000560959 CTSBP07858 339 aa17.82■□□□□ 0.44
TPM1-226ENST00000560959 ALAS2P22557 587 aa17.82■□□□□ 0.44
TPM1-226ENST00000560959 CDKN2BP42772 138 aa17.82■□□□□ 0.44
TPM1-226ENST00000560959 SLC1A1P43005 524 aa17.82■□□□□ 0.44
TPM1-226ENST00000560959 GEMP55040 296 aa17.82■□□□□ 0.44
TPM1-226ENST00000560959 KIR2DS3Q14952 304 aa17.82■□□□□ 0.44
TPM1-226ENST00000560959 NKG7Q16617 165 aa17.82■□□□□ 0.44
TPM1-226ENST00000560959 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.82■□□□□ 0.449e-6■■■■□ 24.9
TPM1-226ENST00000560959 TUBB8Q3ZCM7 444 aa17.82■□□□□ 0.44
TPM1-226ENST00000560959 YOD1Q5VVQ6 348 aaPredicted RBP17.82■□□□□ 0.44
TPM1-226ENST00000560959 MFSD7Q6UXD7 560 aa17.82■□□□□ 0.44
TPM1-226ENST00000560959 TRIM73Q86UV7 250 aa17.82■□□□□ 0.44
TPM1-226ENST00000560959 TMEM151BQ8IW70 566 aa17.82■□□□□ 0.44
TPM1-226ENST00000560959 ZNF808Q8N4W9 903 aaPredicted RBP17.82■□□□□ 0.44
TPM1-226ENST00000560959 CPLX3Q8WVH0 158 aa17.82■□□□□ 0.44
TPM1-226ENST00000560959 P3H4Q92791 437 aa17.82■□□□□ 0.44
TPM1-226ENST00000560959 SEMA3GQ9NS98 782 aa17.82■□□□□ 0.44
TPM1-226ENST00000560959 ZDHHC3Q9NYG2 299 aa17.82■□□□□ 0.44
TPM1-226ENST00000560959 EURLQ9NYK6 297 aa17.82■□□□□ 0.44
TPM1-226ENST00000560959 IL1RAPL1Q9NZN1 696 aa17.82■□□□□ 0.44
TPM1-226ENST00000560959 SUCOQ9UBS9 1254 aaKnown RBP17.82■□□□□ 0.44
TPM1-226ENST00000560959 HIVEP1P15822 2718 aa17.82■□□□□ 0.44
TPM1-226ENST00000560959 CCDC78A2IDD5 438 aa17.81■□□□□ 0.44
TPM1-226ENST00000560959 HACD1B0YJ81 288 aa17.81■□□□□ 0.44
TPM1-226ENST00000560959 LIN7AO14910 233 aaPredicted RBP17.81■□□□□ 0.44
TPM1-226ENST00000560959 CST8O60676 142 aa17.81■□□□□ 0.44
TPM1-226ENST00000560959 ITGAXP20702 1163 aa17.81■□□□□ 0.44
TPM1-226ENST00000560959 TDGF1P3P51864 188 aa17.81■□□□□ 0.44
TPM1-226ENST00000560959 MSLNQ13421 630 aaPredicted RBP17.81■□□□□ 0.44
TPM1-226ENST00000560959 RPTNQ6XPR3 784 aa17.81■□□□□ 0.44
TPM1-226ENST00000560959 NR4A3Q92570 626 aa17.81■□□□□ 0.44
TPM1-226ENST00000560959 THOC3Q96J01 351 aaKnown RBP17.81■□□□□ 0.44
TPM1-226ENST00000560959 IRAK4Q9NWZ3 460 aa17.81■□□□□ 0.44
TPM1-226ENST00000560959 SPHK1Q9NYA1 384 aa17.81■□□□□ 0.44
TPM1-226ENST00000560959 RSPH14Q9UHP6 348 aa17.81■□□□□ 0.44
TPM1-226ENST00000560959 TRBV5-4A0A0C4DH59 114 aa17.8■□□□□ 0.44
TPM1-226ENST00000560959 KDM1AO60341 852 aa17.8■□□□□ 0.44
TPM1-226ENST00000560959 AP2A2O94973 939 aa17.8■□□□□ 0.44
TPM1-226ENST00000560959 COX6B1P14854 86 aa17.8■□□□□ 0.44
TPM1-226ENST00000560959 PECAM1P16284 738 aaPredicted RBP17.8■□□□□ 0.44
TPM1-226ENST00000560959 ACADLP28330 430 aa17.8■□□□□ 0.44
TPM1-226ENST00000560959 HTR1EP28566 365 aa17.8■□□□□ 0.44
TPM1-226ENST00000560959 ADRA1AP35348 466 aa17.8■□□□□ 0.44
TPM1-226ENST00000560959 ASTE1Q2TB18 679 aaPredicted RBP17.8■□□□□ 0.44
TPM1-226ENST00000560959 TTLL10Q6ZVT0 673 aa17.8■□□□□ 0.44
TPM1-226ENST00000560959 MRGPRGQ86SM5 289 aa17.8■□□□□ 0.44
TPM1-226ENST00000560959 RHOT2Q8IXI1 618 aa17.8■□□□□ 0.44
TPM1-226ENST00000560959 CATSPER1Q8NEC5 780 aa17.8■□□□□ 0.44
TPM1-226ENST00000560959 OR11G2Q8NGC1 345 aa17.8■□□□□ 0.44
TPM1-226ENST00000560959 OR5AR1Q8NGP9 310 aa17.8■□□□□ 0.44
TPM1-226ENST00000560959 OR1N1Q8NGS0 311 aa17.8■□□□□ 0.44
TPM1-226ENST00000560959 OR13C4Q8NGS5 318 aa17.8■□□□□ 0.44
TPM1-226ENST00000560959 ASF1AQ9Y294 204 aa17.8■□□□□ 0.44
TPM1-226ENST00000560959 SVILO95425 2214 aa17.8■□□□□ 0.44
TPM1-226ENST00000560959 DOCK10Q96BY6 2186 aa17.8■□□□□ 0.44
TPM1-226ENST00000560959 SETD2Q9BYW2 2564 aaPredicted RBP17.79■□□□□ 0.44
TPM1-226ENST00000560959 VSTM2BA6NLU5 285 aa17.79■□□□□ 0.44
TPM1-226ENST00000560959 DSCR3O14972 297 aa17.79■□□□□ 0.44
TPM1-226ENST00000560959 ALOX12BO75342 701 aa17.79■□□□□ 0.44
TPM1-226ENST00000560959 AP2A1O95782 977 aa17.79■□□□□ 0.44
TPM1-226ENST00000560959 TPBGLP0DKB5 382 aa17.79■□□□□ 0.44
TPM1-226ENST00000560959 ACRV1P26436 265 aa17.79■□□□□ 0.44
TPM1-226ENST00000560959 ZNF140P52738 457 aaPredicted RBP17.79■□□□□ 0.44
TPM1-226ENST00000560959 TMPRSS15P98073 1019 aa17.79■□□□□ 0.44
TPM1-226ENST00000560959 FANCCQ00597 558 aa17.79■□□□□ 0.44
TPM1-226ENST00000560959 PLOD1Q02809 727 aaPredicted RBP17.79■□□□□ 0.44
TPM1-226ENST00000560959 VWA2Q5GFL6 755 aa17.79■□□□□ 0.44
TPM1-226ENST00000560959 MCATQ8IVS2 390 aaKnown RBP17.79■□□□□ 0.44
TPM1-226ENST00000560959 OR5K2Q8NHB8 316 aa17.79■□□□□ 0.44
TPM1-226ENST00000560959 HAS2Q92819 552 aa17.79■□□□□ 0.44
TPM1-226ENST00000560959 CCDC120Q96HB5 630 aa17.79■□□□□ 0.44
TPM1-226ENST00000560959 ANP32EQ9BTT0 268 aa17.79■□□□□ 0.44
TPM1-226ENST00000560959 FICDQ9BVA6 458 aa17.79■□□□□ 0.44
TPM1-226ENST00000560959 GBA3Q9H227 469 aa17.79■□□□□ 0.44
TPM1-226ENST00000560959 FAM96AQ9H5X1 160 aa17.79■□□□□ 0.44
TPM1-226ENST00000560959 LUC7LQ9NQ29 371 aaKnown RBP17.79■□□□□ 0.44
TPM1-226ENST00000560959 AAR2Q9Y312 384 aaKnown RBP17.79■□□□□ 0.44
TPM1-226ENST00000560959 TACC2O95359 2948 aa17.79■□□□□ 0.44
TPM1-226ENST00000560959 DCHS2Q6V1P9 2916 aa17.79■□□□□ 0.44
TPM1-226ENST00000560959 TRAV17A0A0B4J275 112 aa17.78■□□□□ 0.44
TPM1-226ENST00000560959 DYTNA2CJ06 578 aa17.78■□□□□ 0.44
TPM1-226ENST00000560959 H7C0S8 307 aa17.78■□□□□ 0.44
TPM1-226ENST00000560959 QSOX1O00391 747 aa17.78■□□□□ 0.44
TPM1-226ENST00000560959 KLHL18O94889 574 aa17.78■□□□□ 0.44
TPM1-226ENST00000560959 HPP00738 406 aa17.78■□□□□ 0.44
TPM1-226ENST00000560959 GYPCP04921 128 aa17.78■□□□□ 0.44
TPM1-226ENST00000560959 ATXN8OSP0DMR3 200 aa17.78■□□□□ 0.44
TPM1-226ENST00000560959 CARSP49589 748 aaKnown RBP17.78■□□□□ 0.44
TPM1-226ENST00000560959 KCNK10P57789 538 aa17.78■□□□□ 0.44
TPM1-226ENST00000560959 Q0VFX4 171 aa17.78■□□□□ 0.44
TPM1-226ENST00000560959 IQCB1Q15051 598 aa17.78■□□□□ 0.44
TPM1-226ENST00000560959 RBBP7Q16576 425 aa17.78■□□□□ 0.44
TPM1-226ENST00000560959 TCTE1Q5JU00 501 aa17.78■□□□□ 0.44
TPM1-226ENST00000560959 ITPRIPL1Q6GPH6 555 aa17.78■□□□□ 0.44
TPM1-226ENST00000560959 XKRXQ6PP77 449 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms