RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 FAM83EQ2M2I3 478 aa11.75□□□□□ -0.53
IRF9-211ENST00000560852 TSNAXIP1Q2TAA8 658 aa11.75□□□□□ -0.53
IRF9-211ENST00000560852 ANKS6Q68DC2 871 aa11.75□□□□□ -0.53
IRF9-211ENST00000560852 METTL2BQ6P1Q9 378 aaKnown RBP11.75□□□□□ -0.53
IRF9-211ENST00000560852 DUS1LQ6P1R4 473 aaKnown RBP11.75□□□□□ -0.53
IRF9-211ENST00000560852 UBE2R2Q712K3 238 aaPredicted RBP11.75□□□□□ -0.53
IRF9-211ENST00000560852 ARHGAP22Q7Z5H3 698 aa11.75□□□□□ -0.53
IRF9-211ENST00000560852 CMC1Q7Z7K0 106 aa11.75□□□□□ -0.53
IRF9-211ENST00000560852 TBC1D1Q86TI0 1168 aaPredicted RBP11.75□□□□□ -0.53
IRF9-211ENST00000560852 PLXDC1Q8IUK5 500 aa11.75□□□□□ -0.53
IRF9-211ENST00000560852 SLITRK4Q8IW52 837 aa11.75□□□□□ -0.53
IRF9-211ENST00000560852 TMEM151AQ8N4L1 468 aa11.75□□□□□ -0.53
IRF9-211ENST00000560852 FLVCR1-AS1Q8TAF5 88 aa11.75□□□□□ -0.53
IRF9-211ENST00000560852 STAG3L4Q8TBR4 150 aa11.75□□□□□ -0.53
IRF9-211ENST00000560852 LCN9Q8WX39 176 aa11.75□□□□□ -0.53
IRF9-211ENST00000560852 SLC22A18Q96BI1 424 aa11.75□□□□□ -0.53
IRF9-211ENST00000560852 FAM136AQ96C01 138 aa11.75□□□□□ -0.53
IRF9-211ENST00000560852 PGM2Q96G03 612 aa11.75□□□□□ -0.53
IRF9-211ENST00000560852 TBC1D10AQ9BXI6 508 aa11.75□□□□□ -0.53
IRF9-211ENST00000560852 PITPNM3Q9BZ71 974 aa11.75□□□□□ -0.53
IRF9-211ENST00000560852 VIPAS39Q9H9C1 493 aa11.75□□□□□ -0.53
IRF9-211ENST00000560852 MKS1Q9NXB0 559 aa11.75□□□□□ -0.53
IRF9-211ENST00000560852 FAM8A1Q9UBU6 413 aa11.75□□□□□ -0.53
IRF9-211ENST00000560852 ADAMTS6Q9UKP5 1117 aa11.75□□□□□ -0.53
IRF9-211ENST00000560852 ICKQ9UPZ9 632 aa11.75□□□□□ -0.53
IRF9-211ENST00000560852 PLAAQ9Y263 795 aa11.75□□□□□ -0.53
IRF9-211ENST00000560852 CFAP20Q9Y6A4 193 aaKnown RBP11.75□□□□□ -0.53
IRF9-211ENST00000560852 TARM1B6A8C7 271 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 E7ENX8 843 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 GIPC1O14908 333 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 DUX1O43812 170 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 PROS1P07225 676 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 MSL3P1P0C860 447 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 ID4P47928 161 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 PGGT1BP53609 377 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 CCL7P80098 99 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 TAP2Q03519 686 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 PCDH1Q08174 1060 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 BMPR2Q13873 1038 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 KRT33BQ14525 404 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 ZNF460Q14592 562 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 TAF1BQ53T94 588 aaPredicted RBP11.74□□□□□ -0.53
IRF9-211ENST00000560852 PPM1JQ5JR12 505 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 ZNF574Q6ZN55 896 aaPredicted RBP11.74□□□□□ -0.53
IRF9-211ENST00000560852 TMPRSS7Q7RTY8 843 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 PRSS42Q7Z5A4 293 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 KMT5CQ86Y97 462 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 CYP4X1Q8N118 509 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 RAB42Q8N4Z0 105 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 LINC01555Q8NAE3 123 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 PDPRQ8NCN5 879 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 ATL1Q8WXF7 558 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 FBXL8Q96CD0 374 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 ZDHHC12Q96GR4 267 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 ATOH8Q96SQ7 321 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 PKP4Q99569 1192 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 TRIM54Q9BYV2 358 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 B3GNT4Q9C0J1 378 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 SRMSQ9H3Y6 488 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 ARGLU1Q9NWB6 273 aaPredicted RBP11.74□□□□□ -0.53
IRF9-211ENST00000560852 SENP1Q9P0U3 644 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 CTNNAL1Q9UBT7 734 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 LNPEPQ9UIQ6 1025 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 IKZF3Q9UKT9 509 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 ACTL7BQ9Y614 415 aa11.74□□□□□ -0.53
IRF9-211ENST00000560852 DCHS1Q96JQ0 3298 aa11.73□□□□□ -0.53
IRF9-211ENST00000560852 SPAARA0A1B0GVQ0 90 aa11.73□□□□□ -0.53
IRF9-211ENST00000560852 A0A1W2PPV9 198 aa11.73□□□□□ -0.53
IRF9-211ENST00000560852 DCDC2BA2VCK2 349 aa11.73□□□□□ -0.53
IRF9-211ENST00000560852 D6RAR5 112 aa11.73□□□□□ -0.53
IRF9-211ENST00000560852 CDC7O00311 574 aa11.73□□□□□ -0.53
IRF9-211ENST00000560852 BTN3A3O00478 584 aa11.73□□□□□ -0.53
IRF9-211ENST00000560852 ZFC3H1O60293 1989 aaKnown RBP11.73□□□□□ -0.53
IRF9-211ENST00000560852 TDRD6O60522 2096 aaKnown RBP11.73□□□□□ -0.53
IRF9-211ENST00000560852 KERAO60938 352 aa11.73□□□□□ -0.53
IRF9-211ENST00000560852 SLC16A8O95907 504 aa11.73□□□□□ -0.53
IRF9-211ENST00000560852 RPLP0P05388 317 aaKnown RBP11.73□□□□□ -0.53
IRF9-211ENST00000560852 RBP1P09455 135 aa11.73□□□□□ -0.53
IRF9-211ENST00000560852 HIST1H2AGP0C0S8 130 aaPredicted RBP11.73□□□□□ -0.53
IRF9-211ENST00000560852 MTHFD2P13995 350 aa11.73□□□□□ -0.53
IRF9-211ENST00000560852 HIST1H2ADP20671 130 aa11.73□□□□□ -0.53
IRF9-211ENST00000560852 SAT1P21673 171 aa11.73□□□□□ -0.53
IRF9-211ENST00000560852 CCND1P24385 295 aa11.73□□□□□ -0.53
IRF9-211ENST00000560852 MAP4P27816 1152 aaKnown RBP11.73□□□□□ -0.53
IRF9-211ENST00000560852 ALDH4A1P30038 563 aa11.73□□□□□ -0.53
IRF9-211ENST00000560852 CRHR1P34998 444 aa11.73□□□□□ -0.53
IRF9-211ENST00000560852 KCNC1P48547 511 aa11.73□□□□□ -0.53
IRF9-211ENST00000560852 PRKG2Q13237 762 aa11.73□□□□□ -0.53
IRF9-211ENST00000560852 BIRC2Q13490 618 aa11.73□□□□□ -0.53
IRF9-211ENST00000560852 TGFBIQ15582 683 aa11.73□□□□□ -0.53
IRF9-211ENST00000560852 PHKG1Q16816 387 aa11.73□□□□□ -0.53
IRF9-211ENST00000560852 SLC5A12Q1EHB4 618 aa11.73□□□□□ -0.53
IRF9-211ENST00000560852 ZXDCQ2QGD7 858 aaPredicted RBP11.73□□□□□ -0.53
IRF9-211ENST00000560852 CCSMST1Q4G0I0 132 aa11.73□□□□□ -0.53
IRF9-211ENST00000560852 RBM44Q6ZP01 1051 aaKnown RBP11.73□□□□□ -0.53
IRF9-211ENST00000560852 RAPH1Q70E73 1250 aa11.73□□□□□ -0.53
IRF9-211ENST00000560852 TRABD2AQ86V40 505 aa11.73□□□□□ -0.53
IRF9-211ENST00000560852 OOSP2Q86WS3 158 aa11.73□□□□□ -0.53
IRF9-211ENST00000560852 TCAIMQ8N3R3 496 aa11.73□□□□□ -0.53
IRF9-211ENST00000560852 GALNT15Q8N3T1 639 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms